EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007582 (Gene tree)
Gene ID: 100179273
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6668 bases
Position: chr1:7959994-7966661
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030416	Sas10_Utp3	PF04000.15	1.1e-10	1	1
ENSCINP00000015534	Sas10_Utp3	PF04000.15	2.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000015534	-	1820	-	ENSCINP00000015534	461 (aa)	-	F7A426
ENSCINT00000034325	-	1832	-	ENSCINP00000030416	465 (aa)	-	H2XL84

Gene Model

Click here to download ENSCING00000007582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007582	-	78	38.503	ENSG00000132467	UTP3	91	35.778	Homo_sapiens
ENSCING00000007582	-	99	37.449	ENSAPOG00000018006	utp3	99	38.272	Acanthochromis_polyacanthus
ENSCING00000007582	-	78	38.147	ENSAMEG00000019540	UTP3	91	35.477	Ailuropoda_melanoleuca
ENSCING00000007582	-	94	36.645	ENSACIG00000010913	utp3	93	36.876	Amphilophus_citrinellus
ENSCING00000007582	-	99	36.992	ENSAOCG00000016134	utp3	93	38.865	Amphiprion_ocellaris
ENSCING00000007582	-	99	37.195	ENSAPEG00000003914	utp3	93	39.083	Amphiprion_percula
ENSCING00000007582	-	99	37.137	ENSATEG00000024940	utp3	99	39.341	Anabas_testudineus
ENSCING00000007582	-	80	37.565	ENSACAG00000012860	UTP3	86	39.277	Anolis_carolinensis
ENSCING00000007582	-	78	38.005	ENSANAG00000031723	UTP3	75	39.071	Aotus_nancymaae
ENSCING00000007582	-	99	39.381	ENSACLG00000015170	utp3	93	40.087	Astatotilapia_calliptera
ENSCING00000007582	-	77	41.417	ENSAMXG00000032941	utp3	90	40.000	Astyanax_mexicanus
ENSCING00000007582	-	78	37.368	ENSBTAG00000009310	UTP3	91	35.033	Bos_taurus
ENSCING00000007582	-	77	39.782	ENSCJAG00000042824	UTP3	75	39.295	Callithrix_jacchus
ENSCING00000007582	-	93	36.526	ENSCAFG00000002913	UTP3	91	35.892	Canis_familiaris
ENSCING00000007582	-	93	36.018	ENSCAFG00020027071	UTP3	74	37.669	Canis_lupus_dingo
ENSCING00000007582	-	78	37.895	ENSCHIG00000002276	UTP3	91	35.477	Capra_hircus
ENSCING00000007582	-	78	38.770	ENSCPOG00000005869	UTP3	91	36.526	Cavia_porcellus
ENSCING00000007582	-	78	38.360	ENSCCAG00000032341	UTP3	75	38.965	Cebus_capucinus
ENSCING00000007582	-	93	37.838	ENSCATG00000016403	UTP3	91	37.330	Cercocebus_atys
ENSCING00000007582	-	78	38.544	ENSCLAG00000017606	UTP3	91	36.607	Chinchilla_lanigera
ENSCING00000007582	-	79	38.770	ENSCSAG00000000420	UTP3	75	38.753	Chlorocebus_sabaeus
ENSCING00000007582	-	77	38.786	ENSCPBG00000019489	UTP3	76	39.370	Chrysemys_picta_bellii
ENSCING00000007582	-	100	60.304	ENSCSAVG00000010608	-	100	60.521	Ciona_savignyi
ENSCING00000007582	-	79	38.770	ENSCANG00000016915	UTP3	91	35.506	Colobus_angolensis_palliatus
ENSCING00000007582	-	80	37.958	ENSCGRG00001001299	Utp3	91	35.965	Cricetulus_griseus_chok1gshd
ENSCING00000007582	-	78	38.400	ENSCGRG00000019120	Utp3	91	35.965	Cricetulus_griseus_crigri
ENSCING00000007582	-	78	34.530	ENSCSEG00000021698	utp3	94	34.656	Cynoglossus_semilaevis
ENSCING00000007582	-	99	36.534	ENSCVAG00000011971	utp3	99	37.006	Cyprinodon_variegatus
ENSCING00000007582	-	94	39.046	ENSDARG00000056720	utp3	93	37.908	Danio_rerio
ENSCING00000007582	-	96	37.336	ENSDNOG00000002962	UTP3	94	36.344	Dasypus_novemcinctus
ENSCING00000007582	-	94	37.281	ENSDORG00000023913	Utp3	93	35.590	Dipodomys_ordii
ENSCING00000007582	-	87	30.476	FBgn0029755	Sas10	82	32.283	Drosophila_melanogaster
ENSCING00000007582	-	95	33.548	ENSEBUG00000015686	utp3	94	32.347	Eptatretus_burgeri
ENSCING00000007582	-	93	36.222	ENSEASG00005016702	UTP3	91	35.076	Equus_asinus_asinus
ENSCING00000007582	-	96	35.837	ENSECAG00000005387	UTP3	95	34.737	Equus_caballus
ENSCING00000007582	-	98	38.217	ENSELUG00000001527	utp3	99	38.703	Esox_lucius
ENSCING00000007582	-	78	39.024	ENSFCAG00000007268	UTP3	91	35.619	Felis_catus
ENSCING00000007582	-	81	36.790	ENSFALG00000014560	UTP3	76	37.403	Ficedula_albicollis
ENSCING00000007582	-	80	41.514	ENSFHEG00000018565	utp3	86	37.277	Fundulus_heteroclitus
ENSCING00000007582	-	86	36.725	ENSGMOG00000001824	utp3	89	38.043	Gadus_morhua
ENSCING00000007582	-	78	40.470	ENSGALG00000047103	UTP3	73	39.386	Gallus_gallus
ENSCING00000007582	-	94	40.397	ENSGAFG00000012330	utp3	93	39.565	Gambusia_affinis
ENSCING00000007582	-	77	40.327	ENSGACG00000007417	utp3	100	40.291	Gasterosteus_aculeatus
ENSCING00000007582	-	94	36.853	ENSGAGG00000003975	UTP3	92	37.391	Gopherus_agassizii
ENSCING00000007582	-	78	38.503	ENSGGOG00000025335	UTP3	91	35.556	Gorilla_gorilla
ENSCING00000007582	-	99	39.050	ENSHBUG00000003276	utp3	93	40.570	Haplochromis_burtoni
ENSCING00000007582	-	95	36.166	ENSHGLG00000020163	UTP3	91	35.892	Heterocephalus_glaber_female
ENSCING00000007582	-	95	36.166	ENSHGLG00100020125	UTP3	91	35.892	Heterocephalus_glaber_male
ENSCING00000007582	-	92	37.528	ENSHCOG00000020540	utp3	95	36.018	Hippocampus_comes
ENSCING00000007582	-	77	39.178	ENSIPUG00000014510	Utp3	93	37.473	Ictalurus_punctatus
ENSCING00000007582	-	79	37.433	ENSSTOG00000029126	UTP3	76	38.147	Ictidomys_tridecemlineatus
ENSCING00000007582	-	93	39.189	ENSJJAG00000014891	Utp3	93	37.251	Jaculus_jaculus
ENSCING00000007582	-	97	38.526	ENSKMAG00000004879	utp3	99	39.167	Kryptolebias_marmoratus
ENSCING00000007582	-	94	38.753	ENSLBEG00000024055	utp3	93	39.427	Labrus_bergylta
ENSCING00000007582	-	94	36.809	ENSLACG00000009975	utp3	94	35.430	Latimeria_chalumnae
ENSCING00000007582	-	88	38.242	ENSLOCG00000001449	utp3	99	39.096	Lepisosteus_oculatus
ENSCING00000007582	-	94	34.910	ENSLAFG00000017017	UTP3	79	37.363	Loxodonta_africana
ENSCING00000007582	-	79	39.572	ENSMFAG00000013579	UTP3	76	39.566	Macaca_fascicularis
ENSCING00000007582	-	79	39.572	ENSMMUG00000014229	UTP3	76	39.566	Macaca_mulatta
ENSCING00000007582	-	79	39.572	ENSMNEG00000005112	UTP3	76	39.566	Macaca_nemestrina
ENSCING00000007582	-	79	39.037	ENSMLEG00000022236	UTP3	76	39.024	Mandrillus_leucophaeus
ENSCING00000007582	-	99	37.782	ENSMAMG00000015467	utp3	99	38.115	Mastacembelus_armatus
ENSCING00000007582	-	99	39.381	ENSMZEG00005014455	utp3	93	40.087	Maylandia_zebra
ENSCING00000007582	-	59	36.332	ENSMGAG00000009998	UTP3	87	35.694	Meleagris_gallopavo
ENSCING00000007582	-	100	35.491	ENSMAUG00000017935	Utp3	97	34.774	Mesocricetus_auratus
ENSCING00000007582	-	93	34.014	ENSMOCG00000005434	Utp3	91	34.076	Microtus_ochrogaster
ENSCING00000007582	-	87	39.379	ENSMMOG00000010804	utp3	80	39.267	Mola_mola
ENSCING00000007582	-	93	38.053	ENSMODG00000019084	UTP3	99	36.555	Monodelphis_domestica
ENSCING00000007582	-	96	35.992	ENSMALG00000003443	utp3	94	37.526	Monopterus_albus
ENSCING00000007582	-	78	38.630	MGP_CAROLIEiJ_G0027375	Utp3	91	36.486	Mus_caroli
ENSCING00000007582	-	93	37.584	ENSMUSG00000070697	Utp3	91	35.698	Mus_musculus
ENSCING00000007582	-	65	33.441	MGP_PahariEiJ_G0017153	-	65	31.661	Mus_pahari
ENSCING00000007582	-	94	37.225	MGP_SPRETEiJ_G0028372	Utp3	91	37.613	Mus_spretus
ENSCING00000007582	-	93	35.227	ENSMPUG00000019074	UTP3	80	36.788	Mustela_putorius_furo
ENSCING00000007582	-	77	38.356	ENSMLUG00000003722	UTP3	79	38.542	Myotis_lucifugus
ENSCING00000007582	-	100	35.818	ENSNGAG00000012521	Utp3	100	35.174	Nannospalax_galili
ENSCING00000007582	-	99	39.388	ENSNBRG00000020374	utp3	93	40.481	Neolamprologus_brichardi
ENSCING00000007582	-	78	38.070	ENSNLEG00000018563	UTP3	91	35.033	Nomascus_leucogenys
ENSCING00000007582	-	94	36.199	ENSODEG00000018723	UTP3	91	37.443	Octodon_degus
ENSCING00000007582	-	99	37.475	ENSONIG00000003918	utp3	93	39.112	Oreochromis_niloticus
ENSCING00000007582	-	75	45.370	ENSOANG00000013694	-	68	58.333	Ornithorhynchus_anatinus
ENSCING00000007582	-	78	36.141	ENSOCUG00000010003	UTP3	77	36.141	Oryctolagus_cuniculus
ENSCING00000007582	-	77	40.431	ENSORLG00000004019	utp3	93	37.391	Oryzias_latipes
ENSCING00000007582	-	77	40.107	ENSORLG00020020306	utp3	93	37.744	Oryzias_latipes_hni
ENSCING00000007582	-	94	38.717	ENSORLG00015016052	utp3	93	37.856	Oryzias_latipes_hsok
ENSCING00000007582	-	94	38.514	ENSOMEG00000022073	utp3	93	38.938	Oryzias_melastigma
ENSCING00000007582	-	93	36.547	ENSOGAG00000012878	UTP3	91	35.045	Otolemur_garnettii
ENSCING00000007582	-	78	37.895	ENSOARG00000007800	UTP3	91	35.477	Ovis_aries
ENSCING00000007582	-	78	38.503	ENSPPAG00000019684	UTP3	91	35.778	Pan_paniscus
ENSCING00000007582	-	78	38.692	ENSPPRG00000015468	UTP3	91	35.841	Panthera_pardus
ENSCING00000007582	-	78	38.692	ENSPTIG00000006703	UTP3	91	35.841	Panthera_tigris_altaica
ENSCING00000007582	-	79	39.572	ENSPANG00000008263	UTP3	76	39.566	Papio_anubis
ENSCING00000007582	-	94	38.562	ENSPKIG00000012883	utp3	93	39.294	Paramormyrops_kingsleyae
ENSCING00000007582	-	77	39.678	ENSPSIG00000000105	UTP3	60	39.946	Pelodiscus_sinensis
ENSCING00000007582	-	94	38.717	ENSPMGG00000023527	utp3	82	39.050	Periophthalmus_magnuspinnatus
ENSCING00000007582	-	93	36.156	ENSPEMG00000019223	Utp3	91	35.463	Peromyscus_maniculatus_bairdii
ENSCING00000007582	-	94	41.425	ENSPFOG00000014528	utp3	93	40.749	Poecilia_formosa
ENSCING00000007582	-	94	40.980	ENSPLAG00000005600	utp3	93	40.440	Poecilia_latipinna
ENSCING00000007582	-	94	41.163	ENSPMEG00000019359	utp3	93	40.044	Poecilia_mexicana
ENSCING00000007582	-	97	39.530	ENSPREG00000005341	utp3	99	37.736	Poecilia_reticulata
ENSCING00000007582	-	78	37.968	ENSPPYG00000014810	UTP3	91	35.333	Pongo_abelii
ENSCING00000007582	-	94	35.575	ENSPCAG00000012879	UTP3	91	34.423	Procavia_capensis
ENSCING00000007582	-	96	35.622	ENSPVAG00000004333	UTP3	91	35.068	Pteropus_vampyrus
ENSCING00000007582	-	94	37.808	ENSPNYG00000017771	utp3	93	37.255	Pundamilia_nyererei
ENSCING00000007582	-	94	40.529	ENSPNAG00000000182	utp3	93	40.215	Pygocentrus_nattereri
ENSCING00000007582	-	100	36.175	ENSRNOG00000003599	Utp3	100	34.232	Rattus_norvegicus
ENSCING00000007582	-	93	37.162	ENSRBIG00000030025	UTP3	76	38.753	Rhinopithecus_bieti
ENSCING00000007582	-	93	37.162	ENSRROG00000006709	UTP3	76	38.753	Rhinopithecus_roxellana
ENSCING00000007582	-	77	38.692	ENSSBOG00000019914	UTP3	75	38.965	Saimiri_boliviensis_boliviensis
ENSCING00000007582	-	77	37.466	ENSSHAG00000018226	UTP3	98	36.402	Sarcophilus_harrisii
ENSCING00000007582	-	94	38.753	ENSSFOG00015007775	utp3	93	38.839	Scleropages_formosus
ENSCING00000007582	-	97	39.121	ENSSMAG00000015156	utp3	99	38.703	Scophthalmus_maximus
ENSCING00000007582	-	99	38.923	ENSSDUG00000014843	utp3	93	40.263	Seriola_dumerili
ENSCING00000007582	-	78	35.544	ENSSPUG00000007404	UTP3	99	33.737	Sphenodon_punctatus
ENSCING00000007582	-	94	39.121	ENSSPAG00000007106	utp3	93	36.966	Stegastes_partitus
ENSCING00000007582	-	78	38.378	ENSSSCG00000028466	UTP3	76	38.420	Sus_scrofa
ENSCING00000007582	-	94	38.235	ENSTRUG00000014591	utp3	93	39.551	Takifugu_rubripes
ENSCING00000007582	-	98	36.929	ENSTNIG00000014783	utp3	96	38.889	Tetraodon_nigroviridis
ENSCING00000007582	-	96	35.153	ENSTTRG00000008390	UTP3	94	35.371	Tursiops_truncatus
ENSCING00000007582	-	77	38.859	ENSUAMG00000008914	UTP3	76	38.692	Ursus_americanus
ENSCING00000007582	-	77	39.130	ENSUMAG00000003743	UTP3	76	38.692	Ursus_maritimus
ENSCING00000007582	-	60	35.294	ENSVVUG00000004285	UTP3	69	34.859	Vulpes_vulpes
ENSCING00000007582	-	93	35.666	ENSXETG00000026859	utp3	92	35.909	Xenopus_tropicalis
ENSCING00000007582	-	94	38.681	ENSXMAG00000017071	utp3	93	39.207	Xiphophorus_maculatus