EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007627 (Gene tree)
Gene ID: 778553
Gene Symbol: -
Alias: -
Full Name: Ciona intestinalis uncharacterized LOC778553 (LOC778553)%2C mRNA.
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 8332 bases
Position: chr4:2271517-2279848
Accession: NM_001078194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000015643	zf-C2H2	PF00096.26	4.8e-15	1	2
ENSCINP00000015643	zf-C2H2	PF00096.26	4.8e-15	2	2
ENSCINP00000015643	zf-met	PF12874.7	3.8e-09	1	2
ENSCINP00000015643	zf-met	PF12874.7	3.8e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000015643	-	2543	-	ENSCINP00000015643	825 (aa)	-	F6WJ31

Gene Model

Click here to download ENSCING00000007627's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin04068	FoxO signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007627	-	77	80.992	ENSACIG00000007844	bcl6aa	97	80.992	Amphilophus_citrinellus
ENSCING00000007627	-	95	53.418	ENSCSAVG00000006275	-	100	53.544	Ciona_savignyi