EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007663 (Gene tree)
Gene ID: 100179277
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6885 bases
Position: chr12:2815150-2822034
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000015704	efThoc1	PF11957.8	9.1e-112	1	1
ENSCINP00000032930	efThoc1	PF11957.8	9.2e-112	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000030755	-	1531	-	ENSCINP00000032930	489 (aa)	-	H2XTE6
ENSCINT00000015704	-	1476	-	ENSCINP00000015704	492 (aa)	-	F6T7M7

Gene Model

Click here to download ENSCING00000007663's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007663	-	99	48.988	ENSG00000079134	THOC1	95	50.857	Homo_sapiens
ENSCING00000007663	-	99	48.583	ENSAMEG00000006645	THOC1	74	48.207	Ailuropoda_melanoleuca
ENSCING00000007663	-	96	46.555	ENSACIG00000019392	thoc1	70	47.447	Amphilophus_citrinellus
ENSCING00000007663	-	99	46.154	ENSAOCG00000008391	thoc1	72	46.341	Amphiprion_ocellaris
ENSCING00000007663	-	99	47.082	ENSAPEG00000001093	thoc1	74	47.273	Amphiprion_percula
ENSCING00000007663	-	99	47.896	ENSATEG00000004783	thoc1	74	48.089	Anabas_testudineus
ENSCING00000007663	-	92	50.858	ENSAPLG00000016149	THOC1	68	50.866	Anas_platyrhynchos
ENSCING00000007663	-	100	48.617	ENSACAG00000008307	THOC1	72	48.814	Anolis_carolinensis
ENSCING00000007663	-	100	47.826	ENSANAG00000033200	THOC1	74	47.929	Aotus_nancymaae
ENSCING00000007663	-	99	46.869	ENSACLG00000016836	thoc1	74	47.475	Astatotilapia_calliptera
ENSCING00000007663	-	91	47.505	ENSAMXG00000014708	thoc1	70	47.505	Astyanax_mexicanus
ENSCING00000007663	-	99	48.785	ENSBTAG00000019215	THOC1	74	48.406	Bos_taurus
ENSCING00000007663	-	90	35.244	WBGene00020172	thoc-1	68	35.669	Caenorhabditis_elegans
ENSCING00000007663	-	100	48.503	ENSCJAG00000020450	THOC1	74	48.606	Callithrix_jacchus
ENSCING00000007663	-	99	48.583	ENSCAFG00000018324	THOC1	74	48.207	Canis_familiaris
ENSCING00000007663	-	99	48.583	ENSCAFG00020017894	THOC1	74	48.207	Canis_lupus_dingo
ENSCING00000007663	-	99	48.785	ENSCHIG00000015399	THOC1	74	48.406	Capra_hircus
ENSCING00000007663	-	99	48.785	ENSTSYG00000010585	THOC1	73	48.785	Carlito_syrichta
ENSCING00000007663	-	96	33.470	ENSCAPG00000016270	THOC1	69	33.470	Cavia_aperea
ENSCING00000007663	-	99	48.988	ENSCPOG00000000959	THOC1	73	48.988	Cavia_porcellus
ENSCING00000007663	-	100	48.503	ENSCCAG00000025766	THOC1	74	48.606	Cebus_capucinus
ENSCING00000007663	-	100	47.106	ENSCATG00000028180	THOC1	95	50.857	Cercocebus_atys
ENSCING00000007663	-	92	50.433	ENSCLAG00000009117	THOC1	71	50.433	Chinchilla_lanigera
ENSCING00000007663	-	100	48.503	ENSCSAG00000017631	THOC1	74	48.606	Chlorocebus_sabaeus
ENSCING00000007663	-	99	49.000	ENSCPBG00000027558	THOC1	73	48.795	Chrysemys_picta_bellii
ENSCING00000007663	-	93	82.684	ENSCSAVG00000010649	-	73	82.684	Ciona_savignyi
ENSCING00000007663	-	100	48.503	ENSCANG00000034265	THOC1	96	51.003	Colobus_angolensis_palliatus
ENSCING00000007663	-	100	47.106	ENSCGRG00001016464	Thoc1	74	47.211	Cricetulus_griseus_chok1gshd
ENSCING00000007663	-	84	40.000	ENSCGRG00000003390	-	67	40.000	Cricetulus_griseus_crigri
ENSCING00000007663	-	94	48.626	ENSCGRG00000010269	-	72	48.626	Cricetulus_griseus_crigri
ENSCING00000007663	-	99	47.686	ENSCSEG00000012486	thoc1	72	49.676	Cynoglossus_semilaevis
ENSCING00000007663	-	99	47.284	ENSCVAG00000020600	thoc1	74	47.273	Cyprinodon_variegatus
ENSCING00000007663	-	99	48.889	ENSDARG00000088246	thoc1	74	48.889	Danio_rerio
ENSCING00000007663	-	99	48.785	ENSDNOG00000019217	THOC1	74	48.406	Dasypus_novemcinctus
ENSCING00000007663	-	95	47.059	ENSDORG00000008060	Thoc1	72	47.059	Dipodomys_ordii
ENSCING00000007663	-	94	40.741	FBgn0037382	Hpr1	66	40.741	Drosophila_melanogaster
ENSCING00000007663	-	98	33.878	ENSETEG00000004165	THOC1	80	33.878	Echinops_telfairi
ENSCING00000007663	-	89	51.345	ENSEBUG00000005998	thoc1	71	51.345	Eptatretus_burgeri
ENSCING00000007663	-	100	48.200	ENSEASG00005002549	THOC1	71	48.200	Equus_asinus_asinus
ENSCING00000007663	-	100	48.303	ENSECAG00000009267	THOC1	66	48.303	Equus_caballus
ENSCING00000007663	-	99	48.089	ENSELUG00000023277	thoc1	74	48.089	Esox_lucius
ENSCING00000007663	-	100	47.705	ENSFCAG00000022454	THOC1	64	47.809	Felis_catus
ENSCING00000007663	-	93	50.743	ENSFALG00000006205	THOC1	71	50.743	Ficedula_albicollis
ENSCING00000007663	-	98	48.875	ENSFDAG00000006842	THOC1	73	48.875	Fukomys_damarensis
ENSCING00000007663	-	99	46.680	ENSFHEG00000008841	thoc1	74	46.869	Fundulus_heteroclitus
ENSCING00000007663	-	98	46.869	ENSGMOG00000011486	thoc1	73	47.465	Gadus_morhua
ENSCING00000007663	-	92	50.972	ENSGALG00000014915	THOC1	69	50.972	Gallus_gallus
ENSCING00000007663	-	99	46.881	ENSGAFG00000021464	thoc1	76	46.869	Gambusia_affinis
ENSCING00000007663	-	99	47.390	ENSGACG00000017361	thoc1	95	48.209	Gasterosteus_aculeatus
ENSCING00000007663	-	99	49.000	ENSGAGG00000021230	-	72	48.795	Gopherus_agassizii
ENSCING00000007663	-	99	48.988	ENSGGOG00000003013	THOC1	73	48.988	Gorilla_gorilla
ENSCING00000007663	-	99	46.869	ENSHBUG00000009096	thoc1	74	47.475	Haplochromis_burtoni
ENSCING00000007663	-	92	50.433	ENSHGLG00000003712	-	69	50.433	Heterocephalus_glaber_female
ENSCING00000007663	-	56	42.105	ENSHGLG00000009264	-	84	42.105	Heterocephalus_glaber_female
ENSCING00000007663	-	99	48.583	ENSHGLG00100003570	THOC1	73	48.583	Heterocephalus_glaber_male
ENSCING00000007663	-	56	38.947	ENSHGLG00100002225	-	83	38.947	Heterocephalus_glaber_male
ENSCING00000007663	-	60	45.902	ENSHCOG00000017981	thoc1	96	46.230	Hippocampus_comes
ENSCING00000007663	-	78	49.490	ENSIPUG00000005306	thoc1	65	49.490	Ictalurus_punctatus
ENSCING00000007663	-	100	48.902	ENSSTOG00000006484	THOC1	74	48.805	Ictidomys_tridecemlineatus
ENSCING00000007663	-	68	47.661	ENSJJAG00000014893	-	95	47.661	Jaculus_jaculus
ENSCING00000007663	-	99	47.166	ENSKMAG00000003904	thoc1	74	47.166	Kryptolebias_marmoratus
ENSCING00000007663	-	99	47.475	ENSLBEG00000020372	thoc1	72	47.475	Labrus_bergylta
ENSCING00000007663	-	97	50.205	ENSLACG00000014869	THOC1	72	50.410	Latimeria_chalumnae
ENSCING00000007663	-	99	46.988	ENSLOCG00000002097	thoc1	74	47.791	Lepisosteus_oculatus
ENSCING00000007663	-	100	48.303	ENSLAFG00000009585	THOC1	74	48.406	Loxodonta_africana
ENSCING00000007663	-	100	48.503	ENSMFAG00000041520	THOC1	73	48.988	Macaca_fascicularis
ENSCING00000007663	-	100	48.503	ENSMMUG00000004662	THOC1	74	48.606	Macaca_mulatta
ENSCING00000007663	-	100	48.503	ENSMNEG00000040177	THOC1	73	48.988	Macaca_nemestrina
ENSCING00000007663	-	100	48.503	ENSMLEG00000034201	THOC1	73	48.988	Mandrillus_leucophaeus
ENSCING00000007663	-	93	47.660	ENSMAMG00000016747	thoc1	74	47.863	Mastacembelus_armatus
ENSCING00000007663	-	99	46.869	ENSMZEG00005024609	thoc1	74	47.475	Maylandia_zebra
ENSCING00000007663	-	92	50.323	ENSMGAG00000009811	THOC1	71	50.323	Meleagris_gallopavo
ENSCING00000007663	-	100	47.904	ENSMAUG00000010272	Thoc1	74	48.008	Mesocricetus_auratus
ENSCING00000007663	-	99	48.583	ENSMICG00000027200	THOC1	74	48.207	Microcebus_murinus
ENSCING00000007663	-	100	47.505	ENSMOCG00000014536	-	65	47.505	Microtus_ochrogaster
ENSCING00000007663	-	99	41.633	ENSMOCG00000014924	-	69	41.767	Microtus_ochrogaster
ENSCING00000007663	-	90	49.336	ENSMMOG00000011772	thoc1	72	49.554	Mola_mola
ENSCING00000007663	-	100	47.817	ENSMODG00000021482	THOC1	74	48.515	Monodelphis_domestica
ENSCING00000007663	-	98	46.869	ENSMALG00000021872	thoc1	74	47.316	Monopterus_albus
ENSCING00000007663	-	100	47.705	MGP_CAROLIEiJ_G0021989	Thoc1	74	48.008	Mus_caroli
ENSCING00000007663	-	100	47.705	ENSMUSG00000024287	Thoc1	74	48.008	Mus_musculus
ENSCING00000007663	-	100	47.705	MGP_PahariEiJ_G0018726	Thoc1	74	48.008	Mus_pahari
ENSCING00000007663	-	100	48.104	MGP_SPRETEiJ_G0022905	Thoc1	74	48.406	Mus_spretus
ENSCING00000007663	-	99	48.583	ENSMPUG00000005448	THOC1	74	48.207	Mustela_putorius_furo
ENSCING00000007663	-	81	43.564	ENSMLUG00000024912	-	100	43.564	Myotis_lucifugus
ENSCING00000007663	-	96	44.581	ENSMLUG00000027965	-	80	44.581	Myotis_lucifugus
ENSCING00000007663	-	99	48.485	ENSMLUG00000004090	-	74	48.111	Myotis_lucifugus
ENSCING00000007663	-	99	48.583	ENSNGAG00000001401	-	74	48.207	Nannospalax_galili
ENSCING00000007663	-	95	38.235	ENSNGAG00000008061	-	72	38.771	Nannospalax_galili
ENSCING00000007663	-	93	48.608	ENSNBRG00000005991	thoc1	69	49.251	Neolamprologus_brichardi
ENSCING00000007663	-	100	48.503	ENSNLEG00000006835	THOC1	74	48.606	Nomascus_leucogenys
ENSCING00000007663	-	95	48.750	ENSMEUG00000009756	THOC1	73	48.750	Notamacropus_eugenii
ENSCING00000007663	-	93	41.365	ENSOPRG00000001108	THOC1	69	41.239	Ochotona_princeps
ENSCING00000007663	-	99	46.012	ENSODEG00000006623	THOC1	72	45.842	Octodon_degus
ENSCING00000007663	-	99	46.869	ENSONIG00000009440	thoc1	73	47.475	Oreochromis_niloticus
ENSCING00000007663	-	100	48.703	ENSOCUG00000011601	THOC1	74	48.805	Oryctolagus_cuniculus
ENSCING00000007663	-	93	49.036	ENSORLG00000017629	thoc1	70	49.467	Oryzias_latipes
ENSCING00000007663	-	99	45.618	ENSORLG00020007567	thoc1	70	49.254	Oryzias_latipes_hni
ENSCING00000007663	-	93	49.036	ENSORLG00015007356	thoc1	70	49.782	Oryzias_latipes_hsok
ENSCING00000007663	-	93	49.462	ENSOMEG00000008200	thoc1	70	50.323	Oryzias_melastigma
ENSCING00000007663	-	94	48.414	ENSOGAG00000000470	THOC1	70	48.414	Otolemur_garnettii
ENSCING00000007663	-	98	48.875	ENSOARG00000009238	THOC1	72	48.875	Ovis_aries
ENSCING00000007663	-	100	48.503	ENSPPAG00000031812	THOC1	73	48.988	Pan_paniscus
ENSCING00000007663	-	99	48.381	ENSPPRG00000023794	THOC1	96	50.571	Panthera_pardus
ENSCING00000007663	-	99	48.381	ENSPTIG00000007469	THOC1	96	50.571	Panthera_tigris_altaica
ENSCING00000007663	-	100	47.826	ENSPTRG00000009816	THOC1	74	47.929	Pan_troglodytes
ENSCING00000007663	-	100	47.913	ENSPANG00000008665	THOC1	74	48.016	Papio_anubis
ENSCING00000007663	-	99	47.368	ENSPKIG00000005906	thoc1	74	48.178	Paramormyrops_kingsleyae
ENSCING00000007663	-	73	52.973	ENSPSIG00000007691	THOC1	66	52.717	Pelodiscus_sinensis
ENSCING00000007663	-	93	49.362	ENSPMGG00000008279	thoc1	70	49.362	Periophthalmus_magnuspinnatus
ENSCING00000007663	-	100	47.505	ENSPEMG00000021789	Thoc1	74	47.610	Peromyscus_maniculatus_bairdii
ENSCING00000007663	-	64	46.130	ENSPCIG00000026942	THOC1	64	46.130	Phascolarctos_cinereus
ENSCING00000007663	-	99	46.988	ENSPFOG00000011673	thoc1	74	46.976	Poecilia_formosa
ENSCING00000007663	-	99	46.479	ENSPLAG00000019648	thoc1	74	46.465	Poecilia_latipinna
ENSCING00000007663	-	99	47.189	ENSPMEG00000007083	thoc1	74	47.177	Poecilia_mexicana
ENSCING00000007663	-	99	46.479	ENSPREG00000006719	thoc1	77	46.465	Poecilia_reticulata
ENSCING00000007663	-	100	48.503	ENSPPYG00000009049	-	99	48.503	Pongo_abelii
ENSCING00000007663	-	99	48.185	ENSPCAG00000005320	THOC1	73	48.185	Procavia_capensis
ENSCING00000007663	-	99	48.583	ENSPCOG00000009234	THOC1	74	48.207	Propithecus_coquereli
ENSCING00000007663	-	99	47.773	ENSPVAG00000004007	THOC1	73	47.410	Pteropus_vampyrus
ENSCING00000007663	-	99	46.869	ENSPNYG00000019152	thoc1	74	47.475	Pundamilia_nyererei
ENSCING00000007663	-	92	50.108	ENSPNAG00000023390	thoc1	69	50.108	Pygocentrus_nattereri
ENSCING00000007663	-	100	48.503	ENSRBIG00000033738	THOC1	84	48.606	Rhinopithecus_bieti
ENSCING00000007663	-	100	48.503	ENSRROG00000044988	THOC1	96	51.003	Rhinopithecus_roxellana
ENSCING00000007663	-	100	48.503	ENSSBOG00000016556	THOC1	73	48.988	Saimiri_boliviensis_boliviensis
ENSCING00000007663	-	100	47.904	ENSSHAG00000014829	THOC1	74	48.606	Sarcophilus_harrisii
ENSCING00000007663	-	99	48.081	ENSSFOG00015021527	thoc1	74	48.687	Scleropages_formosus
ENSCING00000007663	-	91	49.673	ENSSMAG00000018465	thoc1	69	50.109	Scophthalmus_maximus
ENSCING00000007663	-	93	48.394	ENSSDUG00000016810	thoc1	70	49.036	Seriola_dumerili
ENSCING00000007663	-	93	48.180	ENSSLDG00000015555	thoc1	70	48.822	Seriola_lalandi_dorsalis
ENSCING00000007663	-	83	50.192	ENSSARG00000006910	THOC1	61	50.192	Sorex_araneus
ENSCING00000007663	-	92	50.000	ENSSPUG00000007238	THOC1	68	49.784	Sphenodon_punctatus
ENSCING00000007663	-	92	47.516	ENSSPAG00000018847	thoc1	68	47.722	Stegastes_partitus
ENSCING00000007663	-	100	48.104	ENSSSCG00000025653	THOC1	69	48.583	Sus_scrofa
ENSCING00000007663	-	92	51.082	ENSTGUG00000010204	THOC1	69	51.082	Taeniopygia_guttata
ENSCING00000007663	-	99	48.081	ENSTRUG00000013518	thoc1	74	48.081	Takifugu_rubripes
ENSCING00000007663	-	99	47.495	ENSTNIG00000008473	thoc1	74	47.505	Tetraodon_nigroviridis
ENSCING00000007663	-	100	42.515	ENSTBEG00000016920	THOC1	74	42.430	Tupaia_belangeri
ENSCING00000007663	-	99	43.320	ENSTTRG00000016664	THOC1	74	43.028	Tursiops_truncatus
ENSCING00000007663	-	99	48.583	ENSUAMG00000002527	THOC1	74	48.207	Ursus_americanus
ENSCING00000007663	-	99	48.583	ENSUMAG00000019693	THOC1	74	48.207	Ursus_maritimus
ENSCING00000007663	-	99	48.583	ENSVVUG00000004384	THOC1	74	48.207	Vulpes_vulpes
ENSCING00000007663	-	99	47.485	ENSXETG00000003155	thoc1	72	47.485	Xenopus_tropicalis
ENSCING00000007663	-	91	48.148	ENSXCOG00000016085	thoc1	65	48.140	Xiphophorus_couchianus
ENSCING00000007663	-	99	46.680	ENSXMAG00000002353	thoc1	74	46.667	Xiphophorus_maculatus