EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007703 (Gene tree)
Gene ID: 100177129
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3400 bases
Position: chrHT000059.1:125004-128403
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000015868	GTP_EFTU	PF00009.27	1.9e-53	1	1
ENSCINP00000015868	GTP_EFTU_D2	PF03144.25	1.7e-16	1	1
ENSCINP00000015868	GTP_EFTU_D3	PF03143.17	5.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000015868	-	1410	-	ENSCINP00000015868	469 (aa)	-	F6ZID9

Gene Model

Click here to download ENSCING00000007703's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007703	-	97	75.877	ENSAPOG00000004714	-	100	75.751	Acanthochromis_polyacanthus
ENSCING00000007703	-	89	77.273	ENSACIG00000001219	-	99	77.273	Amphilophus_citrinellus
ENSCING00000007703	-	87	76.961	ENSAOCG00000022002	-	100	76.794	Amphiprion_ocellaris
ENSCING00000007703	-	99	78.326	ENSAOCG00000022039	-	100	78.326	Amphiprion_ocellaris
ENSCING00000007703	-	99	78.541	ENSAPEG00000016361	-	100	78.541	Amphiprion_percula
ENSCING00000007703	-	98	78.214	ENSATEG00000003244	-	97	78.038	Anabas_testudineus
ENSCING00000007703	-	99	77.682	ENSACLG00000022560	-	99	77.682	Astatotilapia_calliptera
ENSCING00000007703	-	99	77.468	WBGene00001168	eef-1A.1	99	77.468	Caenorhabditis_elegans
ENSCING00000007703	-	99	77.468	WBGene00001169	eef-1A.2	87	89.552	Caenorhabditis_elegans
ENSCING00000007703	-	97	79.039	ENSCING00000005126	-	100	79.060	Ciona_intestinalis
ENSCING00000007703	-	97	79.431	ENSCING00000018894	-	99	79.443	Ciona_intestinalis
ENSCING00000007703	-	99	78.465	ENSCING00000021478	-	99	78.465	Ciona_intestinalis
ENSCING00000007703	-	99	78.112	ENSCSAVG00000006357	-	98	90.667	Ciona_savignyi
ENSCING00000007703	-	98	77.342	ENSCSAVG00000001085	-	90	77.342	Ciona_savignyi
ENSCING00000007703	-	96	76.805	ENSCSAVG00000003196	-	99	76.874	Ciona_savignyi
ENSCING00000007703	-	97	77.802	ENSCSAVG00000009663	-	99	78.065	Ciona_savignyi
ENSCING00000007703	-	97	78.509	ENSCSEG00000008011	-	100	78.326	Cynoglossus_semilaevis
ENSCING00000007703	-	89	76.739	ENSCSEG00000007992	-	99	76.739	Cynoglossus_semilaevis
ENSCING00000007703	-	89	77.273	ENSCSEG00000007972	-	100	77.273	Cynoglossus_semilaevis
ENSCING00000007703	-	97	78.947	ENSCVAG00000019356	-	100	78.755	Cyprinodon_variegatus
ENSCING00000007703	-	97	77.193	FBgn0000557	eEF1alpha2	100	77.039	Drosophila_melanogaster
ENSCING00000007703	-	99	77.897	FBgn0284245	eEF1alpha1	99	77.897	Drosophila_melanogaster
ENSCING00000007703	-	99	75.699	ENSEBUG00000015814	-	100	75.699	Eptatretus_burgeri
ENSCING00000007703	-	99	80.472	ENSFHEG00000015054	-	100	80.472	Fundulus_heteroclitus
ENSCING00000007703	-	97	78.289	ENSGAFG00000014646	-	100	78.112	Gambusia_affinis
ENSCING00000007703	-	97	78.070	ENSGACG00000002182	-	100	77.897	Gasterosteus_aculeatus
ENSCING00000007703	-	99	77.897	ENSGACG00000002143	-	100	77.897	Gasterosteus_aculeatus
ENSCING00000007703	-	55	72.763	ENSHBUG00000017166	-	95	72.763	Haplochromis_burtoni
ENSCING00000007703	-	97	77.632	ENSHCOG00000008468	-	100	77.468	Hippocampus_comes
ENSCING00000007703	-	99	79.785	ENSHCOG00000008489	-	100	79.785	Hippocampus_comes
ENSCING00000007703	-	97	78.289	ENSLBEG00000002759	-	100	78.112	Labrus_bergylta
ENSCING00000007703	-	99	77.849	ENSLBEG00000002955	-	100	77.849	Labrus_bergylta
ENSCING00000007703	-	97	78.947	ENSMAMG00000007715	-	100	78.755	Mastacembelus_armatus
ENSCING00000007703	-	99	78.280	ENSMMOG00000001106	-	99	78.280	Mola_mola
ENSCING00000007703	-	97	78.728	ENSMMOG00000001165	-	100	90.909	Mola_mola
ENSCING00000007703	-	99	72.318	ENSMMOG00000018160	-	100	84.783	Mola_mola
ENSCING00000007703	-	99	67.452	ENSNBRG00000017346	-	99	67.452	Neolamprologus_brichardi
ENSCING00000007703	-	77	76.045	ENSONIG00000017760	-	99	76.045	Oreochromis_niloticus
ENSCING00000007703	-	97	78.509	ENSORLG00000007614	eef1a	100	78.326	Oryzias_latipes
ENSCING00000007703	-	99	80.472	ENSORLG00015002397	-	100	80.472	Oryzias_latipes_hsok
ENSCING00000007703	-	97	78.728	ENSOMEG00000018226	-	100	78.541	Oryzias_melastigma
ENSCING00000007703	-	93	47.826	ENSPMGG00000022427	-	97	61.250	Periophthalmus_magnuspinnatus
ENSCING00000007703	-	97	78.947	ENSPMGG00000023911	-	100	90.805	Periophthalmus_magnuspinnatus
ENSCING00000007703	-	98	77.996	ENSPFOG00000003924	-	99	77.825	Poecilia_formosa
ENSCING00000007703	-	97	78.289	ENSPLAG00000004316	-	100	78.112	Poecilia_latipinna
ENSCING00000007703	-	97	78.509	ENSPMEG00000001010	-	100	78.326	Poecilia_mexicana
ENSCING00000007703	-	99	80.258	ENSPREG00000008243	-	100	80.258	Poecilia_reticulata
ENSCING00000007703	-	99	77.682	ENSPNYG00000007263	-	99	77.682	Pundamilia_nyererei
ENSCING00000007703	-	96	74.165	YPR080W	TEF1	100	73.978	Saccharomyces_cerevisiae
ENSCING00000007703	-	96	74.165	YBR118W	TEF2	100	73.978	Saccharomyces_cerevisiae
ENSCING00000007703	-	95	70.940	ENSSMAG00000018469	-	100	69.939	Scophthalmus_maximus
ENSCING00000007703	-	51	73.950	ENSSMAG00000016277	-	100	71.815	Scophthalmus_maximus
ENSCING00000007703	-	97	78.289	ENSSDUG00000008198	-	100	78.112	Seriola_dumerili
ENSCING00000007703	-	97	78.070	ENSSPAG00000001710	-	100	77.897	Stegastes_partitus
ENSCING00000007703	-	99	77.849	ENSTRUG00000005066	-	99	77.849	Takifugu_rubripes
ENSCING00000007703	-	97	78.728	ENSTRUG00000005727	ef-1a	100	78.541	Takifugu_rubripes
ENSCING00000007703	-	96	78.319	ENSTNIG00000002617	-	94	78.319	Tetraodon_nigroviridis
ENSCING00000007703	-	97	78.728	ENSTNIG00000002619	-	100	78.541	Tetraodon_nigroviridis
ENSCING00000007703	-	97	78.289	ENSXCOG00000001542	-	100	90.805	Xiphophorus_couchianus