EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007818 (Gene tree)
Gene ID: 100185906
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3991 bases
Position: chr10:4725694-4729684
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000016005	DEAD	PF00270.29	8.4e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000016005	-	1282	-	ENSCINP00000016005	410 (aa)	-	F6XF93

Gene Model

Click here to download ENSCING00000007818's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG
cin03015	mRNA surveillance pathway	KEGG
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007818	-	98	89.082	ENSG00000141543	EIF4A3	98	89.082	Homo_sapiens
ENSCING00000007818	-	98	88.337	ENSAPOG00000017112	eif4a3	99	88.337	Acanthochromis_polyacanthus
ENSCING00000007818	-	97	88.945	ENSAMEG00000015194	EIF4A3	98	88.945	Ailuropoda_melanoleuca
ENSCING00000007818	-	98	88.337	ENSACIG00000009719	eif4a3	99	88.337	Amphilophus_citrinellus
ENSCING00000007818	-	98	88.337	ENSAOCG00000021655	eif4a3	99	88.337	Amphiprion_ocellaris
ENSCING00000007818	-	98	88.337	ENSAPEG00000018658	eif4a3	99	88.337	Amphiprion_percula
ENSCING00000007818	-	98	88.337	ENSATEG00000014793	eif4a3	99	88.337	Anabas_testudineus
ENSCING00000007818	-	86	90.909	ENSAPLG00000014717	EIF4A3	100	90.909	Anas_platyrhynchos
ENSCING00000007818	-	96	89.620	ENSACAG00000014384	EIF4A3	92	89.646	Anolis_carolinensis
ENSCING00000007818	-	98	89.082	ENSANAG00000005557	EIF4A3	98	89.082	Aotus_nancymaae
ENSCING00000007818	-	98	88.089	ENSACLG00000004174	eif4a3	99	88.089	Astatotilapia_calliptera
ENSCING00000007818	-	98	88.337	ENSAMXG00000020882	eif4a3	99	88.337	Astyanax_mexicanus
ENSCING00000007818	-	98	89.082	ENSBTAG00000016023	EIF4A3	98	89.082	Bos_taurus
ENSCING00000007818	-	97	84.596	WBGene00022029	Y65B4A.6	100	86.380	Caenorhabditis_elegans
ENSCING00000007818	-	97	83.960	WBGene00018007	F33D11.10	99	83.960	Caenorhabditis_elegans
ENSCING00000007818	-	99	83.619	ENSCJAG00000016777	-	99	83.619	Callithrix_jacchus
ENSCING00000007818	-	98	89.082	ENSCJAG00000048589	-	98	89.082	Callithrix_jacchus
ENSCING00000007818	-	98	89.526	ENSCAFG00000005614	EIF4A3	98	89.082	Canis_familiaris
ENSCING00000007818	-	98	89.526	ENSCAFG00020008253	EIF4A3	98	89.082	Canis_lupus_dingo
ENSCING00000007818	-	98	89.082	ENSCHIG00000024284	EIF4A3	98	89.082	Capra_hircus
ENSCING00000007818	-	98	89.082	ENSTSYG00000008738	EIF4A3	98	89.082	Carlito_syrichta
ENSCING00000007818	-	87	87.606	ENSCAPG00000000964	EIF4A3	92	87.606	Cavia_aperea
ENSCING00000007818	-	98	89.082	ENSCPOG00000006485	EIF4A3	98	89.082	Cavia_porcellus
ENSCING00000007818	-	98	89.082	ENSCCAG00000036144	EIF4A3	98	89.082	Cebus_capucinus
ENSCING00000007818	-	98	89.082	ENSCATG00000039262	-	98	89.082	Cercocebus_atys
ENSCING00000007818	-	99	81.418	ENSCATG00000039629	-	99	81.418	Cercocebus_atys
ENSCING00000007818	-	98	89.082	ENSCLAG00000014502	EIF4A3	98	89.082	Chinchilla_lanigera
ENSCING00000007818	-	81	90.060	ENSCPBG00000017801	EIF4A3	98	90.060	Chrysemys_picta_bellii
ENSCING00000007818	-	90	97.832	ENSCSAVG00000009920	-	100	97.832	Ciona_savignyi
ENSCING00000007818	-	98	74.194	ENSCANG00000043503	EIF4A3	98	74.194	Colobus_angolensis_palliatus
ENSCING00000007818	-	98	89.526	ENSCGRG00001022918	-	98	89.082	Cricetulus_griseus_chok1gshd
ENSCING00000007818	-	99	72.127	ENSCGRG00001018048	-	100	72.127	Cricetulus_griseus_chok1gshd
ENSCING00000007818	-	100	71.951	ENSCGRG00000001983	-	100	71.951	Cricetulus_griseus_crigri
ENSCING00000007818	-	86	91.243	ENSCGRG00000017119	-	100	91.243	Cricetulus_griseus_crigri
ENSCING00000007818	-	96	90.585	ENSCSEG00000021058	eif4a3	97	90.585	Cynoglossus_semilaevis
ENSCING00000007818	-	98	88.806	ENSCVAG00000006864	eif4a3	99	88.806	Cyprinodon_variegatus
ENSCING00000007818	-	97	88.917	ENSDARG00000102978	eif4a3	98	88.917	Danio_rerio
ENSCING00000007818	-	87	91.268	ENSDNOG00000009027	EIF4A3	96	91.268	Dasypus_novemcinctus
ENSCING00000007818	-	98	89.082	ENSDORG00000013028	-	98	89.082	Dipodomys_ordii
ENSCING00000007818	-	97	84.887	FBgn0037573	CG7483	99	84.887	Drosophila_melanogaster
ENSCING00000007818	-	97	89.196	ENSEBUG00000003713	eif4a3	94	88.395	Eptatretus_burgeri
ENSCING00000007818	-	98	89.082	ENSEASG00005005107	EIF4A3	98	89.082	Equus_asinus_asinus
ENSCING00000007818	-	98	89.082	ENSECAG00000015925	EIF4A3	98	89.082	Equus_caballus
ENSCING00000007818	-	98	82.878	ENSEEUG00000006008	EIF4A3	98	82.878	Erinaceus_europaeus
ENSCING00000007818	-	96	89.822	ENSELUG00000018528	eif4a3	97	89.822	Esox_lucius
ENSCING00000007818	-	98	89.082	ENSFCAG00000008246	EIF4A3	98	89.082	Felis_catus
ENSCING00000007818	-	87	91.268	ENSFALG00000002343	EIF4A3	100	91.268	Ficedula_albicollis
ENSCING00000007818	-	98	89.082	ENSFDAG00000020774	EIF4A3	98	89.082	Fukomys_damarensis
ENSCING00000007818	-	96	89.031	ENSGMOG00000001560	eif4a3	100	89.031	Gadus_morhua
ENSCING00000007818	-	97	89.673	ENSGALG00000008530	EIF4A3	97	89.526	Gallus_gallus
ENSCING00000007818	-	98	88.337	ENSGAFG00000013487	eif4a3	99	88.337	Gambusia_affinis
ENSCING00000007818	-	99	87.775	ENSGACG00000020004	eif4a3	97	90.885	Gasterosteus_aculeatus
ENSCING00000007818	-	98	88.834	ENSGAGG00000016434	EIF4A3	99	88.834	Gopherus_agassizii
ENSCING00000007818	-	98	89.082	ENSGGOG00000012918	EIF4A3	98	89.082	Gorilla_gorilla
ENSCING00000007818	-	98	88.337	ENSHBUG00000014892	eif4a3	99	88.337	Haplochromis_burtoni
ENSCING00000007818	-	98	89.082	ENSHGLG00000004635	EIF4A3	98	89.082	Heterocephalus_glaber_female
ENSCING00000007818	-	98	89.082	ENSHGLG00100006837	EIF4A3	98	89.082	Heterocephalus_glaber_male
ENSCING00000007818	-	97	75.616	ENSHCOG00000011335	eif4a3	87	75.616	Hippocampus_comes
ENSCING00000007818	-	98	88.529	ENSIPUG00000021785	eif4a3	99	88.529	Ictalurus_punctatus
ENSCING00000007818	-	98	89.082	ENSSTOG00000002664	EIF4A3	98	89.082	Ictidomys_tridecemlineatus
ENSCING00000007818	-	98	88.586	ENSJJAG00000016503	-	98	88.586	Jaculus_jaculus
ENSCING00000007818	-	98	89.082	ENSJJAG00000015870	-	98	89.082	Jaculus_jaculus
ENSCING00000007818	-	99	85.149	ENSKMAG00000010113	eif4a3	93	85.149	Kryptolebias_marmoratus
ENSCING00000007818	-	89	89.532	ENSLBEG00000020356	eif4a3	97	89.532	Labrus_bergylta
ENSCING00000007818	-	98	89.109	ENSLACG00000000108	EIF4A3	99	89.109	Latimeria_chalumnae
ENSCING00000007818	-	96	90.331	ENSLOCG00000015796	eif4a3	95	90.331	Lepisosteus_oculatus
ENSCING00000007818	-	98	89.082	ENSLAFG00000015628	EIF4A3	98	89.082	Loxodonta_africana
ENSCING00000007818	-	95	83.590	ENSMFAG00000018955	-	96	83.590	Macaca_fascicularis
ENSCING00000007818	-	98	89.082	ENSMFAG00000043778	EIF4A3	98	89.082	Macaca_fascicularis
ENSCING00000007818	-	98	88.834	ENSMMUG00000009590	EIF4A3	98	88.834	Macaca_mulatta
ENSCING00000007818	-	94	82.946	ENSMMUG00000007050	-	96	82.946	Macaca_mulatta
ENSCING00000007818	-	97	89.196	ENSMNEG00000039333	-	93	89.196	Macaca_nemestrina
ENSCING00000007818	-	98	81.546	ENSMNEG00000038447	-	100	81.546	Macaca_nemestrina
ENSCING00000007818	-	86	91.243	ENSMLEG00000032948	EIF4A3	100	91.243	Mandrillus_leucophaeus
ENSCING00000007818	-	98	88.337	ENSMAMG00000017369	eif4a3	99	88.337	Mastacembelus_armatus
ENSCING00000007818	-	98	82.134	ENSMZEG00005015371	eif4a3	99	82.134	Maylandia_zebra
ENSCING00000007818	-	98	88.337	ENSMZEG00005000259	-	99	88.337	Maylandia_zebra
ENSCING00000007818	-	87	91.268	ENSMGAG00000007270	EIF4A3	100	91.268	Meleagris_gallopavo
ENSCING00000007818	-	98	89.526	ENSMAUG00000012955	-	98	89.082	Mesocricetus_auratus
ENSCING00000007818	-	98	84.367	ENSMICG00000044243	-	99	84.367	Microcebus_murinus
ENSCING00000007818	-	98	84.119	ENSMICG00000041585	-	98	84.119	Microcebus_murinus
ENSCING00000007818	-	98	80.846	ENSMICG00000011946	-	98	80.846	Microcebus_murinus
ENSCING00000007818	-	98	83.784	ENSMICG00000009136	-	98	83.784	Microcebus_murinus
ENSCING00000007818	-	99	86.797	ENSMICG00000034467	-	100	86.797	Microcebus_murinus
ENSCING00000007818	-	98	83.623	ENSMICG00000045127	-	99	83.623	Microcebus_murinus
ENSCING00000007818	-	98	85.321	ENSMOCG00000017297	-	98	67.076	Microtus_ochrogaster
ENSCING00000007818	-	98	83.085	ENSMMOG00000018352	eif4a3	93	83.085	Mola_mola
ENSCING00000007818	-	99	84.314	ENSMODG00000003697	-	99	84.314	Monodelphis_domestica
ENSCING00000007818	-	98	89.082	ENSMODG00000002190	-	98	89.082	Monodelphis_domestica
ENSCING00000007818	-	98	88.308	ENSMALG00000016324	eif4a3	99	88.308	Monopterus_albus
ENSCING00000007818	-	98	88.834	MGP_CAROLIEiJ_G0017495	-	98	88.834	Mus_caroli
ENSCING00000007818	-	99	86.375	ENSMUSG00000094973	Gm8994	100	86.375	Mus_musculus
ENSCING00000007818	-	98	88.834	ENSMUSG00000025580	Eif4a3	98	88.834	Mus_musculus
ENSCING00000007818	-	99	86.618	ENSMUSG00000107906	Gm5580	100	86.618	Mus_musculus
ENSCING00000007818	-	98	89.082	MGP_PahariEiJ_G0018622	-	98	89.082	Mus_pahari
ENSCING00000007818	-	98	89.082	MGP_SPRETEiJ_G0018339	Eif4a3	98	89.082	Mus_spretus
ENSCING00000007818	-	87	91.268	ENSMPUG00000012216	EIF4A3	84	91.268	Mustela_putorius_furo
ENSCING00000007818	-	98	85.037	ENSMLUG00000012233	-	98	85.037	Myotis_lucifugus
ENSCING00000007818	-	87	76.751	ENSMLUG00000024690	-	100	76.751	Myotis_lucifugus
ENSCING00000007818	-	84	88.116	ENSMLUG00000009585	-	100	88.116	Myotis_lucifugus
ENSCING00000007818	-	98	89.082	ENSNGAG00000003189	-	98	89.082	Nannospalax_galili
ENSCING00000007818	-	98	88.337	ENSNBRG00000021671	eif4a3	99	88.337	Neolamprologus_brichardi
ENSCING00000007818	-	98	89.082	ENSNLEG00000015595	EIF4A3	98	89.082	Nomascus_leucogenys
ENSCING00000007818	-	98	79.901	ENSMEUG00000008521	EIF4A3	98	79.901	Notamacropus_eugenii
ENSCING00000007818	-	98	89.082	ENSODEG00000010300	EIF4A3	98	89.082	Octodon_degus
ENSCING00000007818	-	98	88.337	ENSONIG00000019828	eif4a3	99	88.337	Oreochromis_niloticus
ENSCING00000007818	-	69	84.043	ENSOANG00000000334	EIF4A3	99	84.043	Ornithorhynchus_anatinus
ENSCING00000007818	-	98	88.834	ENSORLG00000018405	eif4a3	99	88.834	Oryzias_latipes
ENSCING00000007818	-	98	88.834	ENSOMEG00000007998	eif4a3	99	88.834	Oryzias_melastigma
ENSCING00000007818	-	98	89.082	ENSOGAG00000007495	-	98	89.082	Otolemur_garnettii
ENSCING00000007818	-	98	88.586	ENSOGAG00000026206	-	98	88.586	Otolemur_garnettii
ENSCING00000007818	-	99	85.049	ENSOARG00000005144	-	99	85.049	Ovis_aries
ENSCING00000007818	-	98	89.082	ENSOARG00000002169	-	98	89.082	Ovis_aries
ENSCING00000007818	-	81	85.285	ENSPPAG00000021017	-	89	85.241	Pan_paniscus
ENSCING00000007818	-	98	89.082	ENSPPRG00000021873	EIF4A3	98	89.082	Panthera_pardus
ENSCING00000007818	-	88	90.000	ENSPTIG00000009646	EIF4A3	99	90.000	Panthera_tigris_altaica
ENSCING00000007818	-	98	87.129	ENSPTRG00000009737	EIF4A3	98	87.129	Pan_troglodytes
ENSCING00000007818	-	98	80.397	ENSPANG00000021217	-	98	80.397	Papio_anubis
ENSCING00000007818	-	98	89.082	ENSPANG00000019672	-	98	89.082	Papio_anubis
ENSCING00000007818	-	96	90.076	ENSPKIG00000016912	eif4a3	97	90.076	Paramormyrops_kingsleyae
ENSCING00000007818	-	68	93.190	ENSPSIG00000004036	EIF4A3	100	93.190	Pelodiscus_sinensis
ENSCING00000007818	-	98	89.082	ENSPEMG00000009441	-	98	89.082	Peromyscus_maniculatus_bairdii
ENSCING00000007818	-	87	91.268	ENSPCIG00000005856	-	98	91.193	Phascolarctos_cinereus
ENSCING00000007818	-	98	88.337	ENSPFOG00000009300	eif4a3	97	88.337	Poecilia_formosa
ENSCING00000007818	-	98	88.337	ENSPLAG00000007436	eif4a3	99	88.337	Poecilia_latipinna
ENSCING00000007818	-	98	88.337	ENSPMEG00000008078	eif4a3	99	88.337	Poecilia_mexicana
ENSCING00000007818	-	98	88.586	ENSPREG00000006006	eif4a3	99	88.586	Poecilia_reticulata
ENSCING00000007818	-	98	89.082	ENSPPYG00000008714	EIF4A3	98	89.082	Pongo_abelii
ENSCING00000007818	-	98	74.065	ENSPCAG00000002931	EIF4A3	98	73.697	Procavia_capensis
ENSCING00000007818	-	98	89.082	ENSPCOG00000020004	EIF4A3	98	89.082	Propithecus_coquereli
ENSCING00000007818	-	98	89.082	ENSPVAG00000003627	EIF4A3	98	89.082	Pteropus_vampyrus
ENSCING00000007818	-	98	88.337	ENSPNYG00000016865	eif4a3	99	88.337	Pundamilia_nyererei
ENSCING00000007818	-	98	88.337	ENSPNAG00000008053	eif4a3	99	88.337	Pygocentrus_nattereri
ENSCING00000007818	-	98	89.082	ENSRNOG00000045791	Eif4a3	98	89.082	Rattus_norvegicus
ENSCING00000007818	-	98	89.082	ENSRBIG00000029705	EIF4A3	98	89.082	Rhinopithecus_bieti
ENSCING00000007818	-	98	89.082	ENSRROG00000042322	EIF4A3	98	89.082	Rhinopithecus_roxellana
ENSCING00000007818	-	92	63.032	YJL138C	TIF2	95	63.032	Saccharomyces_cerevisiae
ENSCING00000007818	-	92	63.032	YKR059W	TIF1	95	63.032	Saccharomyces_cerevisiae
ENSCING00000007818	-	94	61.954	YDR021W	-	97	61.954	Saccharomyces_cerevisiae
ENSCING00000007818	-	98	89.082	ENSSBOG00000024694	EIF4A3	98	89.082	Saimiri_boliviensis_boliviensis
ENSCING00000007818	-	98	89.082	ENSSHAG00000004638	-	90	89.082	Sarcophilus_harrisii
ENSCING00000007818	-	96	90.076	ENSSHAG00000005751	-	98	88.586	Sarcophilus_harrisii
ENSCING00000007818	-	96	90.331	ENSSFOG00015022017	eif4a3	97	90.331	Scleropages_formosus
ENSCING00000007818	-	96	90.076	ENSSFOG00015004896	-	97	90.076	Scleropages_formosus
ENSCING00000007818	-	98	88.614	ENSSMAG00000021078	eif4a3	99	88.614	Scophthalmus_maximus
ENSCING00000007818	-	98	88.337	ENSSDUG00000021512	eif4a3	99	88.337	Seriola_dumerili
ENSCING00000007818	-	88	86.981	ENSSLDG00000010112	eif4a3	93	86.981	Seriola_lalandi_dorsalis
ENSCING00000007818	-	54	90.135	ENSSARG00000009017	-	99	90.135	Sorex_araneus
ENSCING00000007818	-	96	90.331	ENSSPUG00000013935	EIF4A3	98	88.834	Sphenodon_punctatus
ENSCING00000007818	-	97	88.442	ENSSPAG00000017012	eif4a3	97	88.442	Stegastes_partitus
ENSCING00000007818	-	98	89.082	ENSSSCG00000017155	EIF4A3	98	89.082	Sus_scrofa
ENSCING00000007818	-	80	90.909	ENSTGUG00000002132	EIF4A3	100	90.909	Taeniopygia_guttata
ENSCING00000007818	-	99	87.531	ENSTRUG00000011543	eif4a3	100	87.531	Takifugu_rubripes
ENSCING00000007818	-	99	87.255	ENSTNIG00000002924	eif4a3	99	87.255	Tetraodon_nigroviridis
ENSCING00000007818	-	86	82.203	ENSTTRG00000000514	EIF4A3	100	82.203	Tursiops_truncatus
ENSCING00000007818	-	98	89.082	ENSUAMG00000027453	EIF4A3	98	89.082	Ursus_americanus
ENSCING00000007818	-	93	85.455	ENSUMAG00000014617	EIF4A3	99	90.625	Ursus_maritimus
ENSCING00000007818	-	98	89.526	ENSVVUG00000017984	EIF4A3	98	89.082	Vulpes_vulpes
ENSCING00000007818	-	98	88.529	ENSXETG00000013720	eif4a3	97	88.089	Xenopus_tropicalis
ENSCING00000007818	-	98	88.030	ENSXCOG00000010824	eif4a3	98	88.030	Xiphophorus_couchianus
ENSCING00000007818	-	98	88.337	ENSXMAG00000014111	eif4a3	99	88.337	Xiphophorus_maculatus