EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007876 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2472 bases
Position: chr1:5697319-5699790
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000016134	MMR_HSR1	PF01926.23	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000016134	-	945	-	ENSCINP00000016134	315 (aa)	-	F6TGX2

Gene Model

Click here to download ENSCING00000007876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007876	-	95	83.278	ENSG00000155876	RRAGA	96	83.278	Homo_sapiens
ENSCING00000007876	-	95	83.946	ENSG00000083750	RRAGB	99	86.010	Homo_sapiens
ENSCING00000007876	-	96	82.178	ENSAPOG00000012140	rraga	96	82.178	Acanthochromis_polyacanthus
ENSCING00000007876	-	96	81.848	ENSACIG00000013561	rraga	96	81.848	Amphilophus_citrinellus
ENSCING00000007876	-	96	82.178	ENSAOCG00000002304	rraga	96	82.178	Amphiprion_ocellaris
ENSCING00000007876	-	96	82.178	ENSAPEG00000006571	rraga	96	82.178	Amphiprion_percula
ENSCING00000007876	-	96	82.178	ENSATEG00000011885	rraga	96	82.178	Anabas_testudineus
ENSCING00000007876	-	95	82.609	ENSANAG00000031746	-	96	82.609	Aotus_nancymaae
ENSCING00000007876	-	95	83.946	ENSANAG00000020912	RRAGB	86	83.946	Aotus_nancymaae
ENSCING00000007876	-	96	82.178	ENSACLG00000010458	rraga	96	82.178	Astatotilapia_calliptera
ENSCING00000007876	-	97	81.699	ENSAMXG00000030179	rraga	97	81.699	Astyanax_mexicanus
ENSCING00000007876	-	95	82.943	ENSBTAG00000038064	-	96	82.943	Bos_taurus
ENSCING00000007876	-	95	83.946	ENSBTAG00000012980	RRAGB	96	83.729	Bos_taurus
ENSCING00000007876	-	95	83.278	ENSBTAG00000033543	RRAGA	96	83.278	Bos_taurus
ENSCING00000007876	-	94	63.399	WBGene00006414	raga-1	98	63.399	Caenorhabditis_elegans
ENSCING00000007876	-	95	83.946	ENSCJAG00000007317	RRAGB	86	83.946	Callithrix_jacchus
ENSCING00000007876	-	95	83.278	ENSCJAG00000022413	-	91	83.278	Callithrix_jacchus
ENSCING00000007876	-	95	82.274	ENSCJAG00000001550	-	96	82.274	Callithrix_jacchus
ENSCING00000007876	-	95	83.612	ENSCAFG00020013782	RRAGB	86	83.612	Canis_lupus_dingo
ENSCING00000007876	-	95	83.278	ENSCAFG00020012925	RRAGA	96	83.278	Canis_lupus_dingo
ENSCING00000007876	-	95	83.946	ENSCHIG00000018786	RRAGB	95	83.729	Capra_hircus
ENSCING00000007876	-	95	83.278	ENSCHIG00000004994	RRAGA	96	83.278	Capra_hircus
ENSCING00000007876	-	95	83.946	ENSTSYG00000004397	RRAGB	86	83.946	Carlito_syrichta
ENSCING00000007876	-	94	82.034	ENSCPOG00000011266	RRAGB	96	82.034	Cavia_porcellus
ENSCING00000007876	-	95	83.278	ENSCPOG00000008047	RRAGA	96	83.278	Cavia_porcellus
ENSCING00000007876	-	95	83.946	ENSCCAG00000026742	RRAGB	86	83.946	Cebus_capucinus
ENSCING00000007876	-	95	83.278	ENSCCAG00000000619	-	96	83.278	Cebus_capucinus
ENSCING00000007876	-	95	83.278	ENSCATG00000015913	RRAGA	96	83.278	Cercocebus_atys
ENSCING00000007876	-	95	82.274	ENSCLAG00000003913	RRAGB	86	82.274	Chinchilla_lanigera
ENSCING00000007876	-	95	83.278	ENSCLAG00000017884	RRAGA	96	83.278	Chinchilla_lanigera
ENSCING00000007876	-	95	83.278	ENSCHOG00000001957	RRAGA	96	83.278	Choloepus_hoffmanni
ENSCING00000007876	-	96	83.113	ENSCPBG00000010507	RRAGB	96	83.113	Chrysemys_picta_bellii
ENSCING00000007876	-	98	94.194	ENSCSAVG00000003505	-	99	94.194	Ciona_savignyi
ENSCING00000007876	-	95	83.946	ENSCANG00000017510	RRAGB	86	83.946	Colobus_angolensis_palliatus
ENSCING00000007876	-	95	83.278	ENSCANG00000038134	RRAGA	96	83.278	Colobus_angolensis_palliatus
ENSCING00000007876	-	95	83.612	ENSCGRG00001013394	Rragb	96	83.390	Cricetulus_griseus_chok1gshd
ENSCING00000007876	-	92	82.818	ENSCGRG00000003443	Rraga	93	82.818	Cricetulus_griseus_crigri
ENSCING00000007876	-	94	83.390	ENSCGRG00000006827	Rragb	96	83.390	Cricetulus_griseus_crigri
ENSCING00000007876	-	96	82.178	ENSCSEG00000014142	rraga	96	82.178	Cynoglossus_semilaevis
ENSCING00000007876	-	96	82.178	ENSCVAG00000021719	rraga	96	82.178	Cyprinodon_variegatus
ENSCING00000007876	-	95	83.278	ENSDNOG00000015581	RRAGA	96	83.278	Dasypus_novemcinctus
ENSCING00000007876	-	95	83.221	ENSDORG00000015932	Rragb	92	83.221	Dipodomys_ordii
ENSCING00000007876	-	95	83.278	ENSDORG00000015994	Rraga	96	83.278	Dipodomys_ordii
ENSCING00000007876	-	94	75.676	FBgn0037647	RagA-B	95	75.676	Drosophila_melanogaster
ENSCING00000007876	-	94	81.017	ENSEBUG00000008941	rraga	83	80.528	Eptatretus_burgeri
ENSCING00000007876	-	88	84.058	ENSEASG00005006973	RRAGB	81	84.058	Equus_asinus_asinus
ENSCING00000007876	-	95	83.278	ENSEASG00005019266	RRAGA	88	83.278	Equus_asinus_asinus
ENSCING00000007876	-	95	83.946	ENSECAG00000006020	RRAGB	86	83.946	Equus_caballus
ENSCING00000007876	-	95	83.278	ENSECAG00000005729	RRAGA	88	83.278	Equus_caballus
ENSCING00000007876	-	95	83.278	ENSEEUG00000009466	RRAGA	96	83.278	Erinaceus_europaeus
ENSCING00000007876	-	96	82.178	ENSELUG00000009655	rraga	96	82.178	Esox_lucius
ENSCING00000007876	-	95	83.278	ENSFCAG00000022742	RRAGA	96	83.278	Felis_catus
ENSCING00000007876	-	95	83.946	ENSFCAG00000013932	RRAGB	86	83.946	Felis_catus
ENSCING00000007876	-	96	82.781	ENSFALG00000011263	RRAGB	82	82.781	Ficedula_albicollis
ENSCING00000007876	-	94	83.446	ENSFDAG00000018157	RRAGB	96	83.446	Fukomys_damarensis
ENSCING00000007876	-	96	82.178	ENSFHEG00000002145	rraga	96	82.178	Fundulus_heteroclitus
ENSCING00000007876	-	96	81.579	ENSGMOG00000004849	rraga	96	81.579	Gadus_morhua
ENSCING00000007876	-	96	83.113	ENSGALG00000041226	RRAGB	96	83.113	Gallus_gallus
ENSCING00000007876	-	95	82.943	ENSGAFG00000006618	rraga	96	82.943	Gambusia_affinis
ENSCING00000007876	-	96	81.311	ENSGACG00000020342	rraga	97	82.373	Gasterosteus_aculeatus
ENSCING00000007876	-	96	83.113	ENSGAGG00000012251	RRAGB	96	83.113	Gopherus_agassizii
ENSCING00000007876	-	95	83.278	ENSGGOG00000021937	RRAGA	96	83.278	Gorilla_gorilla
ENSCING00000007876	-	95	83.946	ENSGGOG00000011501	RRAGB	86	83.946	Gorilla_gorilla
ENSCING00000007876	-	96	78.405	ENSHBUG00000004494	rraga	92	78.405	Haplochromis_burtoni
ENSCING00000007876	-	95	83.278	ENSHGLG00000000313	RRAGB	96	82.770	Heterocephalus_glaber_female
ENSCING00000007876	-	95	82.943	ENSHGLG00100020985	RRAGA	96	82.943	Heterocephalus_glaber_male
ENSCING00000007876	-	96	82.178	ENSHCOG00000006819	rraga	96	82.178	Hippocampus_comes
ENSCING00000007876	-	96	82.508	ENSIPUG00000014734	Rraga	96	82.508	Ictalurus_punctatus
ENSCING00000007876	-	93	83.562	ENSSTOG00000004660	RRAGB	97	83.562	Ictidomys_tridecemlineatus
ENSCING00000007876	-	95	82.333	ENSJJAG00000021386	Rragb	96	82.333	Jaculus_jaculus
ENSCING00000007876	-	95	83.278	ENSJJAG00000008212	Rraga	96	83.278	Jaculus_jaculus
ENSCING00000007876	-	96	82.178	ENSKMAG00000005709	rraga	96	82.178	Kryptolebias_marmoratus
ENSCING00000007876	-	96	82.178	ENSLBEG00000004506	rraga	96	82.178	Labrus_bergylta
ENSCING00000007876	-	96	82.450	ENSLACG00000016067	RRAGB	96	82.450	Latimeria_chalumnae
ENSCING00000007876	-	96	82.508	ENSLOCG00000014979	rraga	96	82.508	Lepisosteus_oculatus
ENSCING00000007876	-	95	83.612	ENSLAFG00000011082	RRAGA	96	83.612	Loxodonta_africana
ENSCING00000007876	-	95	83.946	ENSMFAG00000041833	RRAGB	86	83.946	Macaca_fascicularis
ENSCING00000007876	-	95	83.278	ENSMFAG00000030433	RRAGA	96	83.278	Macaca_fascicularis
ENSCING00000007876	-	94	83.446	ENSMMUG00000017635	RRAGB	96	83.446	Macaca_mulatta
ENSCING00000007876	-	95	83.278	ENSMMUG00000018395	RRAGA	86	83.278	Macaca_mulatta
ENSCING00000007876	-	95	83.278	ENSMNEG00000019531	RRAGA	96	83.278	Macaca_nemestrina
ENSCING00000007876	-	95	83.946	ENSMLEG00000004971	RRAGB	86	83.946	Mandrillus_leucophaeus
ENSCING00000007876	-	95	83.278	ENSMLEG00000025200	RRAGA	96	83.278	Mandrillus_leucophaeus
ENSCING00000007876	-	96	82.178	ENSMAMG00000012091	rraga	96	82.178	Mastacembelus_armatus
ENSCING00000007876	-	96	82.178	ENSMZEG00005015085	rraga	96	82.178	Maylandia_zebra
ENSCING00000007876	-	96	83.113	ENSMGAG00000005575	RRAGB	96	83.113	Meleagris_gallopavo
ENSCING00000007876	-	95	83.278	ENSMAUG00000003702	Rraga	96	83.278	Mesocricetus_auratus
ENSCING00000007876	-	95	83.278	ENSMICG00000016534	RRAGA	96	83.278	Microcebus_murinus
ENSCING00000007876	-	95	83.946	ENSMICG00000035059	RRAGB	86	83.946	Microcebus_murinus
ENSCING00000007876	-	94	83.729	ENSMOCG00000010568	Rragb	95	83.729	Microtus_ochrogaster
ENSCING00000007876	-	95	83.221	ENSMODG00000011337	RRAGB	97	83.221	Monodelphis_domestica
ENSCING00000007876	-	96	82.178	ENSMALG00000020662	rraga	96	82.178	Monopterus_albus
ENSCING00000007876	-	95	83.278	MGP_CAROLIEiJ_G0026131	Rraga	96	83.278	Mus_caroli
ENSCING00000007876	-	95	83.278	ENSMUSG00000070934	Rraga	96	83.278	Mus_musculus
ENSCING00000007876	-	95	83.278	MGP_PahariEiJ_G0028469	Rraga	96	83.278	Mus_pahari
ENSCING00000007876	-	95	83.278	MGP_SPRETEiJ_G0027096	Rraga	96	83.278	Mus_spretus
ENSCING00000007876	-	95	83.278	ENSMPUG00000019121	RRAGA	96	83.278	Mustela_putorius_furo
ENSCING00000007876	-	95	83.278	ENSMLUG00000010870	RRAGA	96	83.278	Myotis_lucifugus
ENSCING00000007876	-	95	83.557	ENSNGAG00000015964	Rragb	96	83.557	Nannospalax_galili
ENSCING00000007876	-	95	83.278	ENSNGAG00000007602	Rraga	96	83.278	Nannospalax_galili
ENSCING00000007876	-	96	82.178	ENSNBRG00000016166	rraga	96	82.178	Neolamprologus_brichardi
ENSCING00000007876	-	95	83.278	ENSNLEG00000018985	RRAGA	96	83.278	Nomascus_leucogenys
ENSCING00000007876	-	95	83.946	ENSNLEG00000016350	RRAGB	86	83.946	Nomascus_leucogenys
ENSCING00000007876	-	95	83.278	ENSOPRG00000005886	RRAGA	96	83.278	Ochotona_princeps
ENSCING00000007876	-	94	82.770	ENSODEG00000002951	RRAGB	93	82.770	Octodon_degus
ENSCING00000007876	-	95	83.612	ENSODEG00000020270	RRAGA	96	83.612	Octodon_degus
ENSCING00000007876	-	96	82.178	ENSONIG00000004447	rraga	96	82.178	Oreochromis_niloticus
ENSCING00000007876	-	59	84.946	ENSOANG00000031844	RRAGB	87	84.946	Ornithorhynchus_anatinus
ENSCING00000007876	-	95	83.278	ENSOCUG00000003506	RRAGA	96	83.278	Oryctolagus_cuniculus
ENSCING00000007876	-	95	82.943	ENSORLG00000009278	rraga	95	82.943	Oryzias_latipes
ENSCING00000007876	-	95	82.943	ENSORLG00020001597	rraga	95	82.943	Oryzias_latipes_hni
ENSCING00000007876	-	95	82.943	ENSORLG00015005697	rraga	95	82.943	Oryzias_latipes_hsok
ENSCING00000007876	-	95	82.609	ENSOMEG00000005139	rraga	96	82.192	Oryzias_melastigma
ENSCING00000007876	-	95	83.946	ENSOARG00000005619	RRAGB	86	83.946	Ovis_aries
ENSCING00000007876	-	95	83.278	ENSOARG00000008644	RRAGA	95	83.278	Ovis_aries
ENSCING00000007876	-	95	83.278	ENSPPAG00000012463	RRAGA	96	83.278	Pan_paniscus
ENSCING00000007876	-	95	83.946	ENSPPAG00000034614	RRAGB	86	83.946	Pan_paniscus
ENSCING00000007876	-	95	83.278	ENSPPRG00000021236	RRAGA	96	83.278	Panthera_pardus
ENSCING00000007876	-	95	83.946	ENSPPRG00000021943	RRAGB	86	83.946	Panthera_pardus
ENSCING00000007876	-	94	84.459	ENSPTIG00000005300	RRAGB	86	84.459	Panthera_tigris_altaica
ENSCING00000007876	-	95	83.946	ENSPTRG00000021955	RRAGB	86	83.946	Pan_troglodytes
ENSCING00000007876	-	95	83.278	ENSPTRG00000020798	RRAGA	88	83.278	Pan_troglodytes
ENSCING00000007876	-	95	83.278	ENSPANG00000000085	RRAGA	96	83.278	Papio_anubis
ENSCING00000007876	-	95	83.946	ENSPANG00000003594	RRAGB	86	83.946	Papio_anubis
ENSCING00000007876	-	96	82.508	ENSPKIG00000021851	rraga	96	82.508	Paramormyrops_kingsleyae
ENSCING00000007876	-	96	83.113	ENSPSIG00000012621	RRAGB	96	83.113	Pelodiscus_sinensis
ENSCING00000007876	-	95	82.943	ENSPMGG00000009530	rraga	91	90.323	Periophthalmus_magnuspinnatus
ENSCING00000007876	-	95	83.278	ENSPCIG00000010545	RRAGB	88	83.278	Phascolarctos_cinereus
ENSCING00000007876	-	96	82.178	ENSPFOG00000019453	rraga	95	82.178	Poecilia_formosa
ENSCING00000007876	-	96	82.178	ENSPLAG00000006541	rraga	96	82.178	Poecilia_latipinna
ENSCING00000007876	-	96	82.178	ENSPMEG00000008057	rraga	96	82.178	Poecilia_mexicana
ENSCING00000007876	-	96	82.178	ENSPREG00000021154	rraga	96	82.178	Poecilia_reticulata
ENSCING00000007876	-	95	83.946	ENSPPYG00000020398	RRAGB	86	83.946	Pongo_abelii
ENSCING00000007876	-	95	83.278	ENSPPYG00000019196	RRAGA	96	83.278	Pongo_abelii
ENSCING00000007876	-	95	83.278	ENSPCAG00000003962	RRAGA	96	83.278	Procavia_capensis
ENSCING00000007876	-	95	83.278	ENSPCOG00000013740	RRAGA	96	83.278	Propithecus_coquereli
ENSCING00000007876	-	95	83.946	ENSPCOG00000009451	RRAGB	86	83.946	Propithecus_coquereli
ENSCING00000007876	-	96	82.178	ENSPNYG00000021130	rraga	96	82.178	Pundamilia_nyererei
ENSCING00000007876	-	96	79.208	ENSPNAG00000011028	rraga	96	80.263	Pygocentrus_nattereri
ENSCING00000007876	-	95	83.278	ENSRNOG00000007051	Rraga	96	83.278	Rattus_norvegicus
ENSCING00000007876	-	95	83.278	ENSRBIG00000003572	RRAGA	96	83.278	Rhinopithecus_bieti
ENSCING00000007876	-	88	72.101	ENSRBIG00000031864	RRAGB	87	72.101	Rhinopithecus_bieti
ENSCING00000007876	-	95	83.278	ENSRROG00000002426	RRAGA	96	83.278	Rhinopithecus_roxellana
ENSCING00000007876	-	94	49.679	YML121W	-	99	49.679	Saccharomyces_cerevisiae
ENSCING00000007876	-	95	83.278	ENSSBOG00000008170	-	96	83.278	Saimiri_boliviensis_boliviensis
ENSCING00000007876	-	95	83.946	ENSSBOG00000012810	RRAGB	86	83.946	Saimiri_boliviensis_boliviensis
ENSCING00000007876	-	95	83.278	ENSSHAG00000001266	-	88	83.278	Sarcophilus_harrisii
ENSCING00000007876	-	96	82.508	ENSSFOG00015011428	rraga	96	82.508	Scleropages_formosus
ENSCING00000007876	-	96	82.178	ENSSMAG00000017797	rraga	96	82.178	Scophthalmus_maximus
ENSCING00000007876	-	96	82.178	ENSSDUG00000014535	rraga	96	82.178	Seriola_dumerili
ENSCING00000007876	-	96	82.178	ENSSLDG00000014834	rraga	96	82.178	Seriola_lalandi_dorsalis
ENSCING00000007876	-	94	83.051	ENSSPUG00000019253	RRAGB	97	83.051	Sphenodon_punctatus
ENSCING00000007876	-	96	82.178	ENSSPAG00000009979	rraga	96	82.178	Stegastes_partitus
ENSCING00000007876	-	95	83.278	ENSSSCG00000005174	RRAGA	96	83.278	Sus_scrofa
ENSCING00000007876	-	95	83.946	ENSSSCG00000037228	RRAGB	91	83.946	Sus_scrofa
ENSCING00000007876	-	96	82.781	ENSTGUG00000005543	RRAGB	96	82.781	Taeniopygia_guttata
ENSCING00000007876	-	96	82.508	ENSTRUG00000013796	rraga	96	82.508	Takifugu_rubripes
ENSCING00000007876	-	96	82.508	ENSTNIG00000011814	rraga	96	82.508	Tetraodon_nigroviridis
ENSCING00000007876	-	95	83.221	ENSUAMG00000001776	RRAGA	97	83.221	Ursus_americanus
ENSCING00000007876	-	95	83.946	ENSUAMG00000004721	RRAGB	86	83.946	Ursus_americanus
ENSCING00000007876	-	95	83.946	ENSUMAG00000024099	RRAGB	86	83.946	Ursus_maritimus
ENSCING00000007876	-	88	83.696	ENSVVUG00000015486	RRAGB	73	83.696	Vulpes_vulpes
ENSCING00000007876	-	95	83.278	ENSVVUG00000000604	RRAGA	87	83.278	Vulpes_vulpes
ENSCING00000007876	-	96	82.781	ENSXETG00000000887	rraga	96	82.781	Xenopus_tropicalis
ENSCING00000007876	-	96	82.178	ENSXMAG00000012105	rraga	96	82.178	Xiphophorus_maculatus