EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008090 (Gene tree)
Gene ID: 100176470
Gene Symbol: -
Alias: -
Full Name: ribosome production factor 2 homolog
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2834 bases
Position: chrHT000262.1:244727-247560
Accession: 100176470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000025091	Brix	PF04427.18	3.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000025337	-	986	XM_002129380	ENSCINP00000025091	308 (aa)	XP_002129416	F6PM75

Gene Model

Click here to download ENSCING00000008090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008090	-	98	57.947	ENSG00000197498	RPF2	100	62.150	Homo_sapiens
ENSCING00000008090	-	91	59.786	ENSAPOG00000005714	rpf2	91	59.786	Acanthochromis_polyacanthus
ENSCING00000008090	-	98	56.291	ENSAMEG00000015753	RPF2	93	58.099	Ailuropoda_melanoleuca
ENSCING00000008090	-	53	56.442	ENSACIG00000006659	rpf2	87	61.379	Amphilophus_citrinellus
ENSCING00000008090	-	91	59.431	ENSAOCG00000005173	rpf2	91	59.431	Amphiprion_ocellaris
ENSCING00000008090	-	91	59.431	ENSAPEG00000004003	rpf2	91	59.431	Amphiprion_percula
ENSCING00000008090	-	92	57.951	ENSATEG00000012818	rpf2	92	57.951	Anabas_testudineus
ENSCING00000008090	-	87	62.172	ENSAPLG00000008812	RPF2	98	62.172	Anas_platyrhynchos
ENSCING00000008090	-	96	57.770	ENSACAG00000011270	RPF2	92	59.298	Anolis_carolinensis
ENSCING00000008090	-	97	44.631	ENSANAG00000033736	-	92	46.371	Aotus_nancymaae
ENSCING00000008090	-	97	41.275	ENSANAG00000021067	-	91	42.254	Aotus_nancymaae
ENSCING00000008090	-	86	50.379	ENSANAG00000025459	-	90	49.042	Aotus_nancymaae
ENSCING00000008090	-	97	53.691	ENSANAG00000034834	-	93	54.930	Aotus_nancymaae
ENSCING00000008090	-	98	55.629	ENSANAG00000026549	-	93	57.394	Aotus_nancymaae
ENSCING00000008090	-	92	58.451	ENSAMXG00000035201	rpf2	92	58.451	Astyanax_mexicanus
ENSCING00000008090	-	97	57.807	ENSBTAG00000016584	RPF2	93	59.507	Bos_taurus
ENSCING00000008090	-	92	41.696	WBGene00021830	Y54E10A.10	95	41.343	Caenorhabditis_elegans
ENSCING00000008090	-	98	57.947	ENSCJAG00000038330	RPF2	92	63.677	Callithrix_jacchus
ENSCING00000008090	-	98	57.285	ENSCAFG00000003918	RPF2	93	59.155	Canis_familiaris
ENSCING00000008090	-	98	55.150	ENSCHIG00000022499	RPF2	93	57.042	Capra_hircus
ENSCING00000008090	-	98	57.616	ENSTSYG00000013924	RPF2	93	59.507	Carlito_syrichta
ENSCING00000008090	-	96	44.746	ENSCAPG00000014257	RPF2	91	45.552	Cavia_aperea
ENSCING00000008090	-	97	57.047	ENSCPOG00000006797	RPF2	93	58.451	Cavia_porcellus
ENSCING00000008090	-	98	58.278	ENSCCAG00000030864	-	93	60.211	Cebus_capucinus
ENSCING00000008090	-	97	44.518	ENSCCAG00000028553	-	92	45.035	Cebus_capucinus
ENSCING00000008090	-	88	52.768	ENSCCAG00000028906	-	99	51.915	Cebus_capucinus
ENSCING00000008090	-	97	57.047	ENSCCAG00000030365	-	93	58.099	Cebus_capucinus
ENSCING00000008090	-	68	57.143	ENSCATG00000034352	-	81	57.143	Cercocebus_atys
ENSCING00000008090	-	85	46.816	ENSCATG00000029725	-	94	65.116	Cercocebus_atys
ENSCING00000008090	-	83	42.745	ENSCLAG00000013252	-	92	42.745	Chinchilla_lanigera
ENSCING00000008090	-	97	57.718	ENSCLAG00000010393	-	93	59.155	Chinchilla_lanigera
ENSCING00000008090	-	95	46.488	ENSCLAG00000010874	-	94	48.421	Chinchilla_lanigera
ENSCING00000008090	-	92	57.042	ENSCHOG00000005865	RPF2	92	57.042	Choloepus_hoffmanni
ENSCING00000008090	-	95	58.163	ENSCPBG00000006504	RPF2	93	59.441	Chrysemys_picta_bellii
ENSCING00000008090	-	94	83.162	ENSCSAVG00000010672	-	97	83.972	Ciona_savignyi
ENSCING00000008090	-	98	57.616	ENSCANG00000030665	RPF2	93	59.507	Colobus_angolensis_palliatus
ENSCING00000008090	-	98	57.616	ENSCGRG00001007331	-	93	58.803	Cricetulus_griseus_chok1gshd
ENSCING00000008090	-	98	46.865	ENSCGRG00001005262	-	90	48.239	Cricetulus_griseus_chok1gshd
ENSCING00000008090	-	97	58.389	ENSCGRG00000006083	Rpf2	98	52.688	Cricetulus_griseus_crigri
ENSCING00000008090	-	96	59.933	ENSCSEG00000015725	rpf2	94	61.053	Cynoglossus_semilaevis
ENSCING00000008090	-	91	60.142	ENSCVAG00000001072	rpf2	92	60.142	Cyprinodon_variegatus
ENSCING00000008090	-	91	57.651	ENSDARG00000043960	rpf2	91	57.651	Danio_rerio
ENSCING00000008090	-	65	57.426	ENSDNOG00000039270	RPF2	90	59.677	Dasypus_novemcinctus
ENSCING00000008090	-	69	52.632	ENSDORG00000026915	Rpf2	98	52.632	Dipodomys_ordii
ENSCING00000008090	-	94	45.205	FBgn0038585	Non3	89	45.775	Drosophila_melanogaster
ENSCING00000008090	-	97	53.846	ENSEBUG00000003640	rpf2	85	56.028	Eptatretus_burgeri
ENSCING00000008090	-	92	57.394	ENSEASG00005006927	-	93	57.394	Equus_asinus_asinus
ENSCING00000008090	-	92	59.507	ENSECAG00000017121	RPF2	93	59.507	Equus_caballus
ENSCING00000008090	-	91	47.143	ENSEEUG00000006169	RPF2	94	47.143	Erinaceus_europaeus
ENSCING00000008090	-	92	59.364	ENSELUG00000018518	rpf2	93	59.364	Esox_lucius
ENSCING00000008090	-	98	56.954	ENSFCAG00000001527	RPF2	93	58.803	Felis_catus
ENSCING00000008090	-	98	57.947	ENSFALG00000010816	RPF2	93	59.859	Ficedula_albicollis
ENSCING00000008090	-	86	48.485	ENSFDAG00000016721	-	98	48.485	Fukomys_damarensis
ENSCING00000008090	-	98	58.278	ENSFDAG00000005811	-	93	59.859	Fukomys_damarensis
ENSCING00000008090	-	91	58.007	ENSFHEG00000011243	rpf2	91	58.007	Fundulus_heteroclitus
ENSCING00000008090	-	91	51.971	ENSGMOG00000002521	rpf2	94	51.971	Gadus_morhua
ENSCING00000008090	-	97	59.136	ENSGALG00000037087	RPF2	93	60.211	Gallus_gallus
ENSCING00000008090	-	91	58.007	ENSGAFG00000009537	rpf2	92	58.007	Gambusia_affinis
ENSCING00000008090	-	93	59.298	ENSGACG00000006507	rpf2	93	59.298	Gasterosteus_aculeatus
ENSCING00000008090	-	95	55.102	ENSGAGG00000016221	RPF2	93	56.294	Gopherus_agassizii
ENSCING00000008090	-	92	53.546	ENSGGOG00000024187	-	99	53.546	Gorilla_gorilla
ENSCING00000008090	-	98	47.020	ENSGGOG00000001469	RPF2	91	48.239	Gorilla_gorilla
ENSCING00000008090	-	98	55.814	ENSHBUG00000021805	rpf2	92	58.304	Haplochromis_burtoni
ENSCING00000008090	-	98	55.960	ENSHGLG00000001322	RPF2	93	57.746	Heterocephalus_glaber_female
ENSCING00000008090	-	92	54.965	ENSHGLG00000012697	-	98	54.965	Heterocephalus_glaber_female
ENSCING00000008090	-	92	51.056	ENSHGLG00000012500	-	75	51.761	Heterocephalus_glaber_female
ENSCING00000008090	-	87	46.468	ENSHGLG00100009310	-	93	48.627	Heterocephalus_glaber_male
ENSCING00000008090	-	92	45.745	ENSHGLG00100002981	-	98	45.745	Heterocephalus_glaber_male
ENSCING00000008090	-	92	50.704	ENSHGLG00100012473	-	91	51.408	Heterocephalus_glaber_male
ENSCING00000008090	-	98	55.960	ENSHGLG00100012131	RPF2	93	57.746	Heterocephalus_glaber_male
ENSCING00000008090	-	92	54.965	ENSHGLG00100000462	-	98	54.965	Heterocephalus_glaber_male
ENSCING00000008090	-	91	58.007	ENSHCOG00000000225	rpf2	92	58.007	Hippocampus_comes
ENSCING00000008090	-	93	52.098	ENSIPUG00000016288	rpf2	93	52.098	Ictalurus_punctatus
ENSCING00000008090	-	98	45.033	ENSSTOG00000013114	RPF2	98	42.294	Ictidomys_tridecemlineatus
ENSCING00000008090	-	96	53.716	ENSJJAG00000009092	Rpf2	98	56.463	Jaculus_jaculus
ENSCING00000008090	-	92	60.702	ENSKMAG00000014609	rpf2	93	60.702	Kryptolebias_marmoratus
ENSCING00000008090	-	97	55.853	ENSLBEG00000011907	rpf2	91	51.761	Labrus_bergylta
ENSCING00000008090	-	92	57.394	ENSLACG00000003942	RPF2	92	57.394	Latimeria_chalumnae
ENSCING00000008090	-	92	58.042	ENSLOCG00000016992	rpf2	93	58.042	Lepisosteus_oculatus
ENSCING00000008090	-	92	59.155	ENSLAFG00000018219	RPF2	93	59.155	Loxodonta_africana
ENSCING00000008090	-	98	57.947	ENSMFAG00000000417	RPF2	93	59.859	Macaca_fascicularis
ENSCING00000008090	-	85	47.348	ENSMFAG00000036119	-	98	47.348	Macaca_fascicularis
ENSCING00000008090	-	97	45.819	ENSMMUG00000042376	-	93	46.667	Macaca_mulatta
ENSCING00000008090	-	98	57.947	ENSMMUG00000021532	RPF2	100	62.150	Macaca_mulatta
ENSCING00000008090	-	98	47.351	ENSMNEG00000031683	RPF2	91	48.592	Macaca_nemestrina
ENSCING00000008090	-	97	45.638	ENSMLEG00000042472	-	93	46.479	Mandrillus_leucophaeus
ENSCING00000008090	-	97	56.522	ENSMAMG00000004267	rpf2	91	59.075	Mastacembelus_armatus
ENSCING00000008090	-	98	55.814	ENSMZEG00005015632	rpf2	92	58.304	Maylandia_zebra
ENSCING00000008090	-	97	58.804	ENSMGAG00000013429	RPF2	93	59.859	Meleagris_gallopavo
ENSCING00000008090	-	62	57.143	ENSMAUG00000005049	Rpf2	100	57.143	Mesocricetus_auratus
ENSCING00000008090	-	96	49.495	ENSMICG00000028979	-	93	50.175	Microcebus_murinus
ENSCING00000008090	-	92	51.408	ENSMICG00000038169	-	92	51.408	Microcebus_murinus
ENSCING00000008090	-	98	58.278	ENSMICG00000032086	-	93	59.859	Microcebus_murinus
ENSCING00000008090	-	97	58.528	ENSMOCG00000005634	Rpf2	98	53.405	Microtus_ochrogaster
ENSCING00000008090	-	91	52.688	ENSMMOG00000014844	rpf2	92	52.688	Mola_mola
ENSCING00000008090	-	97	57.191	ENSMODG00000017919	RPF2	92	58.929	Monodelphis_domestica
ENSCING00000008090	-	98	55.814	ENSMALG00000019046	rpf2	93	57.692	Monopterus_albus
ENSCING00000008090	-	98	57.616	MGP_CAROLIEiJ_G0015254	Rpf2	97	60.909	Mus_caroli
ENSCING00000008090	-	98	57.947	ENSMUSG00000038510	Rpf2	97	61.818	Mus_musculus
ENSCING00000008090	-	98	57.947	MGP_PahariEiJ_G0030671	Rpf2	97	62.727	Mus_pahari
ENSCING00000008090	-	98	57.947	MGP_SPRETEiJ_G0016063	Rpf2	97	61.818	Mus_spretus
ENSCING00000008090	-	98	57.616	ENSMPUG00000010183	RPF2	81	59.507	Mustela_putorius_furo
ENSCING00000008090	-	82	59.843	ENSMLUG00000005676	RPF2	93	63.136	Myotis_lucifugus
ENSCING00000008090	-	97	57.047	ENSNGAG00000009701	Rpf2	93	58.451	Nannospalax_galili
ENSCING00000008090	-	98	55.814	ENSNBRG00000011087	rpf2	92	58.304	Neolamprologus_brichardi
ENSCING00000008090	-	98	57.616	ENSNLEG00000027819	RPF2	93	59.507	Nomascus_leucogenys
ENSCING00000008090	-	77	58.051	ENSNLEG00000011848	-	98	58.051	Nomascus_leucogenys
ENSCING00000008090	-	84	56.538	ENSNLEG00000033597	-	87	56.015	Nomascus_leucogenys
ENSCING00000008090	-	97	44.631	ENSMEUG00000006421	RPF2	94	45.324	Notamacropus_eugenii
ENSCING00000008090	-	97	51.342	ENSODEG00000006584	-	92	52.465	Octodon_degus
ENSCING00000008090	-	97	53.691	ENSODEG00000019144	-	93	54.930	Octodon_degus
ENSCING00000008090	-	92	48.763	ENSODEG00000002442	-	97	48.763	Octodon_degus
ENSCING00000008090	-	84	50.388	ENSODEG00000006939	-	94	50.388	Octodon_degus
ENSCING00000008090	-	89	48.000	ENSODEG00000003531	-	100	48.000	Octodon_degus
ENSCING00000008090	-	95	58.163	ENSODEG00000013529	-	92	59.643	Octodon_degus
ENSCING00000008090	-	98	55.150	ENSONIG00000011383	rpf2	92	57.597	Oreochromis_niloticus
ENSCING00000008090	-	98	58.278	ENSOCUG00000016028	RPF2	93	60.211	Oryctolagus_cuniculus
ENSCING00000008090	-	93	60.140	ENSORLG00000015183	rpf2	93	60.140	Oryzias_latipes
ENSCING00000008090	-	93	59.790	ENSORLG00020008756	rpf2	90	58.781	Oryzias_latipes_hni
ENSCING00000008090	-	93	60.140	ENSORLG00015003841	RPF2	93	60.140	Oryzias_latipes_hsok
ENSCING00000008090	-	99	58.497	ENSOMEG00000011508	rpf2	93	60.839	Oryzias_melastigma
ENSCING00000008090	-	98	57.616	ENSOGAG00000007438	RPF2	93	59.507	Otolemur_garnettii
ENSCING00000008090	-	97	57.807	ENSOARG00000015548	-	93	59.507	Ovis_aries
ENSCING00000008090	-	97	57.807	ENSOARG00000009886	-	93	59.507	Ovis_aries
ENSCING00000008090	-	98	57.947	ENSPPAG00000035622	RPF2	93	59.859	Pan_paniscus
ENSCING00000008090	-	87	55.597	ENSPPAG00000032089	-	96	55.597	Pan_paniscus
ENSCING00000008090	-	98	57.285	ENSPPRG00000000320	-	93	59.155	Panthera_pardus
ENSCING00000008090	-	97	49.498	ENSPPRG00000008363	-	93	50.175	Panthera_pardus
ENSCING00000008090	-	98	57.285	ENSPTIG00000002060	RPF2	93	59.155	Panthera_tigris_altaica
ENSCING00000008090	-	98	57.947	ENSPTRG00000018503	RPF2	93	59.859	Pan_troglodytes
ENSCING00000008090	-	98	57.947	ENSPANG00000018834	RPF2	93	59.859	Papio_anubis
ENSCING00000008090	-	92	58.657	ENSPKIG00000019506	rpf2	92	58.657	Paramormyrops_kingsleyae
ENSCING00000008090	-	98	57.285	ENSPSIG00000014887	RPF2	93	59.441	Pelodiscus_sinensis
ENSCING00000008090	-	91	52.330	ENSPEMG00000011413	Rpf2	98	52.330	Peromyscus_maniculatus_bairdii
ENSCING00000008090	-	92	57.746	ENSPCIG00000028172	RPF2	91	57.746	Phascolarctos_cinereus
ENSCING00000008090	-	91	58.363	ENSPFOG00000003396	rpf2	92	58.363	Poecilia_formosa
ENSCING00000008090	-	91	58.007	ENSPLAG00000001226	rpf2	92	58.007	Poecilia_latipinna
ENSCING00000008090	-	91	58.363	ENSPMEG00000007781	rpf2	92	58.363	Poecilia_mexicana
ENSCING00000008090	-	91	58.363	ENSPREG00000020525	rpf2	92	58.363	Poecilia_reticulata
ENSCING00000008090	-	98	57.947	ENSPPYG00000016925	RPF2	93	59.859	Pongo_abelii
ENSCING00000008090	-	63	63.077	ENSPCAG00000002562	RPF2	79	63.077	Procavia_capensis
ENSCING00000008090	-	97	48.495	ENSPCOG00000012785	RPF2	91	49.822	Propithecus_coquereli
ENSCING00000008090	-	77	63.136	ENSPVAG00000003446	RPF2	77	63.136	Pteropus_vampyrus
ENSCING00000008090	-	94	58.681	ENSPNAG00000000082	rpf2	94	58.681	Pygocentrus_nattereri
ENSCING00000008090	-	98	57.947	ENSRNOG00000000587	Rpf2	93	59.507	Rattus_norvegicus
ENSCING00000008090	-	92	58.803	ENSRBIG00000038389	RPF2	93	58.803	Rhinopithecus_bieti
ENSCING00000008090	-	79	55.967	ENSRROG00000036685	-	93	55.967	Rhinopithecus_roxellana
ENSCING00000008090	-	82	53.150	ENSRROG00000028992	-	79	55.042	Rhinopithecus_roxellana
ENSCING00000008090	-	98	58.472	ENSRROG00000036457	RPF2	93	60.211	Rhinopithecus_roxellana
ENSCING00000008090	-	85	52.632	ENSRROG00000039510	-	98	52.632	Rhinopithecus_roxellana
ENSCING00000008090	-	92	37.755	YKR081C	-	85	37.755	Saccharomyces_cerevisiae
ENSCING00000008090	-	82	54.941	ENSSBOG00000022486	-	87	54.941	Saimiri_boliviensis_boliviensis
ENSCING00000008090	-	97	41.860	ENSSBOG00000034420	-	90	43.590	Saimiri_boliviensis_boliviensis
ENSCING00000008090	-	79	46.914	ENSSBOG00000029182	-	93	46.914	Saimiri_boliviensis_boliviensis
ENSCING00000008090	-	85	49.237	ENSSBOG00000025434	-	91	49.237	Saimiri_boliviensis_boliviensis
ENSCING00000008090	-	81	42.742	ENSSBOG00000030264	-	91	42.742	Saimiri_boliviensis_boliviensis
ENSCING00000008090	-	98	57.096	ENSSHAG00000002212	RPF2	92	59.155	Sarcophilus_harrisii
ENSCING00000008090	-	91	55.872	ENSSFOG00015020916	rpf2	92	55.872	Scleropages_formosus
ENSCING00000008090	-	98	57.475	ENSSMAG00000017499	rpf2	93	59.441	Scophthalmus_maximus
ENSCING00000008090	-	97	55.369	ENSSDUG00000010383	rpf2	89	57.857	Seriola_dumerili
ENSCING00000008090	-	97	58.194	ENSSLDG00000022111	rpf2	91	60.854	Seriola_lalandi_dorsalis
ENSCING00000008090	-	97	41.611	ENSSARG00000012063	RPF2	93	41.901	Sorex_araneus
ENSCING00000008090	-	96	55.593	ENSSPUG00000005108	RPF2	91	57.651	Sphenodon_punctatus
ENSCING00000008090	-	91	59.075	ENSSPAG00000008035	rpf2	91	59.075	Stegastes_partitus
ENSCING00000008090	-	98	57.616	ENSSSCG00000004394	RPF2	93	59.507	Sus_scrofa
ENSCING00000008090	-	92	59.859	ENSTGUG00000012034	RPF2	93	59.859	Taeniopygia_guttata
ENSCING00000008090	-	98	56.478	ENSTRUG00000018264	rpf2	92	59.011	Takifugu_rubripes
ENSCING00000008090	-	97	54.027	ENSTNIG00000002749	rpf2	90	56.272	Tetraodon_nigroviridis
ENSCING00000008090	-	82	55.906	ENSTBEG00000017151	RPF2	77	58.475	Tupaia_belangeri
ENSCING00000008090	-	98	57.475	ENSTTRG00000012357	RPF2	93	59.507	Tursiops_truncatus
ENSCING00000008090	-	98	57.616	ENSUAMG00000013497	RPF2	93	59.507	Ursus_americanus
ENSCING00000008090	-	98	57.285	ENSUMAG00000025488	RPF2	93	59.155	Ursus_maritimus
ENSCING00000008090	-	98	56.478	ENSVPAG00000009562	RPF2	93	58.451	Vicugna_pacos
ENSCING00000008090	-	92	50.883	ENSVVUG00000021231	-	93	52.453	Vulpes_vulpes
ENSCING00000008090	-	98	51.656	ENSVVUG00000006593	-	92	53.169	Vulpes_vulpes
ENSCING00000008090	-	92	56.690	ENSXETG00000021335	rpf2	92	56.690	Xenopus_tropicalis
ENSCING00000008090	-	91	55.516	ENSXCOG00000001590	rpf2	92	55.516	Xiphophorus_couchianus
ENSCING00000008090	-	91	51.601	ENSXMAG00000021706	rpf2	91	51.601	Xiphophorus_maculatus