EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008201 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 10743 bases
Position: chr10:2100107-2110849
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000016756	RIO1	PF01163.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000016756	-	1154	-	ENSCINP00000016756	332 (aa)	-	F6PJL4

Gene Model

Click here to download ENSCING00000008201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008201	-	86	55.282	ENSBTAG00000052622	-	90	55.282	Bos_taurus
ENSCING00000008201	-	87	39.041	ENSCPOG00000034310	-	87	39.041	Cavia_porcellus
ENSCING00000008201	-	91	39.604	ENSCGRG00001007918	-	61	39.604	Cricetulus_griseus_chok1gshd
ENSCING00000008201	-	80	42.264	ENSCGRG00001006023	Gm4922	53	42.264	Cricetulus_griseus_chok1gshd
ENSCING00000008201	-	79	45.594	ENSCGRG00001010553	-	51	46.245	Cricetulus_griseus_chok1gshd
ENSCING00000008201	-	80	42.264	ENSCGRG00000009530	Gm4922	53	42.264	Cricetulus_griseus_crigri
ENSCING00000008201	-	93	35.577	ENSFDAG00000016208	-	66	35.987	Fukomys_damarensis
ENSCING00000008201	-	90	36.242	MGP_CAROLIEiJ_G0015144	Gm4922	59	36.242	Mus_caroli
ENSCING00000008201	-	88	38.000	MGP_CAROLIEiJ_G0021080	-	60	38.000	Mus_caroli
ENSCING00000008201	-	88	38.000	MGP_CAROLIEiJ_G0021081	-	60	38.000	Mus_caroli
ENSCING00000008201	-	88	38.000	MGP_CAROLIEiJ_G0021082	-	60	38.000	Mus_caroli
ENSCING00000008201	-	88	38.000	MGP_CAROLIEiJ_G0021079	-	60	38.000	Mus_caroli
ENSCING00000008201	-	88	36.770	ENSMUSG00000044624	Gm4922	57	36.770	Mus_musculus
ENSCING00000008201	-	75	45.565	ENSMUSG00000094682	Gm6902	81	45.565	Mus_musculus
ENSCING00000008201	-	75	45.161	ENSMUSG00000109060	Gm4513	81	45.161	Mus_musculus
ENSCING00000008201	-	75	45.161	ENSMUSG00000095683	Gm10662	78	45.161	Mus_musculus
ENSCING00000008201	-	80	42.545	ENSMUSG00000067941	Gm7168	54	42.545	Mus_musculus
ENSCING00000008201	-	88	38.667	ENSMUSG00000073458	Smok2a	57	38.667	Mus_musculus
ENSCING00000008201	-	80	40.659	ENSMUSG00000073457	Smok2b	56	40.659	Mus_musculus
ENSCING00000008201	-	75	45.565	ENSMUSG00000095363	Gm4567	81	45.565	Mus_musculus
ENSCING00000008201	-	75	45.565	ENSMUSG00000095190	Gm10668	81	45.565	Mus_musculus
ENSCING00000008201	-	75	45.161	ENSMUSG00000095976	Gm5891	78	45.161	Mus_musculus
ENSCING00000008201	-	75	45.161	ENSMUSG00000109396	Gm4565	81	45.161	Mus_musculus
ENSCING00000008201	-	75	45.161	ENSMUSG00000096283	Gm6176	81	45.161	Mus_musculus
ENSCING00000008201	-	75	44.758	ENSMUSG00000101436	Gm5157	81	44.758	Mus_musculus
ENSCING00000008201	-	88	39.333	ENSMUSG00000079156	Smok3b	57	39.333	Mus_musculus
ENSCING00000008201	-	75	45.161	ENSMUSG00000109516	Gm6882	78	45.161	Mus_musculus
ENSCING00000008201	-	88	39.333	ENSMUSG00000075598	Smok3c	57	39.333	Mus_musculus
ENSCING00000008201	-	88	39.333	ENSMUSG00000075599	Smok3a	57	39.333	Mus_musculus
ENSCING00000008201	-	80	42.545	ENSMUSG00000101307	Gm7358	55	41.844	Mus_musculus
ENSCING00000008201	-	80	42.545	ENSMUSG00000101361	Gm7356	54	42.545	Mus_musculus
ENSCING00000008201	-	88	37.801	MGP_PahariEiJ_G0023763	Gm4922	58	37.801	Mus_pahari
ENSCING00000008201	-	88	36.770	MGP_SPRETEiJ_G0015952	Gm4922	58	36.770	Mus_spretus
ENSCING00000008201	-	88	43.643	ENSNGAG00000008026	-	57	43.643	Nannospalax_galili
ENSCING00000008201	-	76	44.269	ENSOGAG00000033945	-	93	43.798	Otolemur_garnettii
ENSCING00000008201	-	83	39.636	ENSPEMG00000022024	-	65	40.613	Peromyscus_maniculatus_bairdii
ENSCING00000008201	-	88	40.956	ENSRNOG00000052093	Smok2a	58	40.956	Rattus_norvegicus
ENSCING00000008201	-	88	41.924	ENSRNOG00000024200	LOC690235	57	41.924	Rattus_norvegicus
ENSCING00000008201	-	88	39.590	ENSRNOG00000030145	RGD1561667	57	39.590	Rattus_norvegicus
ENSCING00000008201	-	80	39.015	ENSRNOG00000028913	AABR07028872.1	83	39.015	Rattus_norvegicus
ENSCING00000008201	-	88	41.638	ENSRNOG00000059551	RGD1560718	58	41.638	Rattus_norvegicus
ENSCING00000008201	-	88	38.488	ENSRNOG00000025799	RGD1560303	58	38.488	Rattus_norvegicus