EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008323 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribonucleases P/MRP protein subunit POP1
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 8427 bases
Position: chr1:4322566-4330992
Accession: 100175786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000016981	POP1	PF06978.11	2.4e-29	1	2
ENSCINP00000016981	POP1	PF06978.11	2.4e-29	2	2
ENSCINP00000016981	POPLD	PF08170.12	4.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000016981	-	3144	XM_002130338	ENSCINP00000016981	985 (aa)	XP_002130374	F6Q7D4

Gene Model

Click here to download ENSCING00000008323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008323	-	90	36.396	ENSG00000104356	POP1	82	38.132	Homo_sapiens
ENSCING00000008323	-	87	35.628	ENSAPOG00000008198	pop1	82	36.032	Acanthochromis_polyacanthus
ENSCING00000008323	-	90	35.827	ENSACIG00000004169	POP1	90	33.000	Amphilophus_citrinellus
ENSCING00000008323	-	87	35.223	ENSAOCG00000010991	pop1	82	35.628	Amphiprion_ocellaris
ENSCING00000008323	-	92	33.569	ENSAPEG00000007607	pop1	89	33.569	Amphiprion_percula
ENSCING00000008323	-	89	34.884	ENSATEG00000024814	POP1	83	35.271	Anabas_testudineus
ENSCING00000008323	-	75	38.866	ENSAPLG00000014418	POP1	74	38.866	Anas_platyrhynchos
ENSCING00000008323	-	79	38.132	ENSANAG00000026360	POP1	86	38.132	Aotus_nancymaae
ENSCING00000008323	-	89	36.032	ENSACLG00000010951	pop1	82	36.437	Astatotilapia_calliptera
ENSCING00000008323	-	77	35.743	ENSAMXG00000014483	POP1	67	35.743	Astyanax_mexicanus
ENSCING00000008323	-	77	37.456	ENSBTAG00000012596	POP1	82	39.689	Bos_taurus
ENSCING00000008323	-	90	36.749	ENSCJAG00000015567	POP1	83	38.132	Callithrix_jacchus
ENSCING00000008323	-	95	33.645	ENSCAFG00000000469	POP1	80	33.762	Canis_familiaris
ENSCING00000008323	-	94	33.762	ENSCAFG00020026765	POP1	80	33.762	Canis_lupus_dingo
ENSCING00000008323	-	75	39.689	ENSCHIG00000017066	POP1	82	39.689	Capra_hircus
ENSCING00000008323	-	90	36.861	ENSCAPG00000007251	POP1	82	37.795	Cavia_aperea
ENSCING00000008323	-	90	37.011	ENSCPOG00000002901	POP1	82	37.743	Cavia_porcellus
ENSCING00000008323	-	90	36.396	ENSCCAG00000018939	POP1	84	38.132	Cebus_capucinus
ENSCING00000008323	-	90	36.396	ENSCATG00000040916	POP1	82	38.132	Cercocebus_atys
ENSCING00000008323	-	90	37.722	ENSCLAG00000007208	POP1	79	38.911	Chinchilla_lanigera
ENSCING00000008323	-	88	37.121	ENSCSAG00000012340	POP1	89	39.076	Chlorocebus_sabaeus
ENSCING00000008323	-	90	37.102	ENSCHOG00000011432	POP1	70	38.911	Choloepus_hoffmanni
ENSCING00000008323	-	90	36.396	ENSCANG00000001647	POP1	82	37.743	Colobus_angolensis_palliatus
ENSCING00000008323	-	89	35.798	ENSCGRG00001017308	Pop1	82	35.798	Cricetulus_griseus_chok1gshd
ENSCING00000008323	-	87	36.842	ENSCSEG00000008737	POP1	81	36.842	Cynoglossus_semilaevis
ENSCING00000008323	-	87	35.200	ENSCVAG00000022248	pop1	82	36.400	Cyprinodon_variegatus
ENSCING00000008323	-	90	36.749	ENSDNOG00000019974	POP1	67	38.521	Dasypus_novemcinctus
ENSCING00000008323	-	71	51.351	ENSDORG00000015384	Pop1	69	51.351	Dipodomys_ordii
ENSCING00000008323	-	58	36.293	FBgn0026702	l(1)G0045	59	36.293	Drosophila_melanogaster
ENSCING00000008323	-	57	36.508	ENSETEG00000007839	POP1	56	36.508	Echinops_telfairi
ENSCING00000008323	-	92	36.486	ENSEASG00005003189	POP1	85	36.486	Equus_asinus_asinus
ENSCING00000008323	-	88	38.911	ENSECAG00000024236	POP1	82	38.911	Equus_caballus
ENSCING00000008323	-	52	50.667	ENSEEUG00000003050	-	51	50.667	Erinaceus_europaeus
ENSCING00000008323	-	76	37.743	ENSFCAG00000002168	POP1	69	37.743	Felis_catus
ENSCING00000008323	-	88	41.224	ENSFALG00000005711	POP1	82	41.224	Ficedula_albicollis
ENSCING00000008323	-	87	36.032	ENSFHEG00000019518	pop1	84	36.047	Fundulus_heteroclitus
ENSCING00000008323	-	92	30.375	ENSGMOG00000000659	POP1	90	30.375	Gadus_morhua
ENSCING00000008323	-	88	34.538	ENSGAFG00000019770	POP1	82	35.341	Gambusia_affinis
ENSCING00000008323	-	88	34.118	ENSGACG00000003499	pop1	82	33.721	Gasterosteus_aculeatus
ENSCING00000008323	-	87	38.956	ENSGAGG00000011737	POP1	79	38.956	Gopherus_agassizii
ENSCING00000008323	-	90	36.396	ENSGGOG00000003176	POP1	82	38.132	Gorilla_gorilla
ENSCING00000008323	-	89	36.032	ENSHBUG00000021583	pop1	82	36.437	Haplochromis_burtoni
ENSCING00000008323	-	89	38.911	ENSHGLG00000006029	POP1	82	38.911	Heterocephalus_glaber_female
ENSCING00000008323	-	89	38.911	ENSHGLG00100016879	POP1	82	38.911	Heterocephalus_glaber_male
ENSCING00000008323	-	81	31.410	ENSIPUG00000018336	pop1	73	31.410	Ictalurus_punctatus
ENSCING00000008323	-	88	38.521	ENSSTOG00000011455	POP1	80	38.521	Ictidomys_tridecemlineatus
ENSCING00000008323	-	88	36.653	ENSLACG00000012498	POP1	88	36.653	Latimeria_chalumnae
ENSCING00000008323	-	89	34.241	ENSLOCG00000009817	POP1	82	35.827	Lepisosteus_oculatus
ENSCING00000008323	-	89	38.132	ENSLAFG00000010770	POP1	82	38.132	Loxodonta_africana
ENSCING00000008323	-	90	36.749	ENSMFAG00000000347	POP1	82	38.132	Macaca_fascicularis
ENSCING00000008323	-	90	36.396	ENSMNEG00000036870	POP1	82	38.132	Macaca_nemestrina
ENSCING00000008323	-	77	36.396	ENSMLEG00000034986	POP1	68	38.132	Mandrillus_leucophaeus
ENSCING00000008323	-	89	36.965	ENSMAMG00000004040	pop1	82	36.965	Mastacembelus_armatus
ENSCING00000008323	-	89	36.032	ENSMZEG00005025448	pop1	82	36.437	Maylandia_zebra
ENSCING00000008323	-	88	40.000	ENSMGAG00000012167	POP1	82	40.000	Meleagris_gallopavo
ENSCING00000008323	-	88	36.576	ENSMAUG00000017537	Pop1	82	36.576	Mesocricetus_auratus
ENSCING00000008323	-	90	36.749	ENSMICG00000004361	POP1	82	38.521	Microcebus_murinus
ENSCING00000008323	-	88	36.965	ENSMOCG00000006356	Pop1	83	36.965	Microtus_ochrogaster
ENSCING00000008323	-	87	31.489	ENSMMOG00000018242	pop1	83	31.092	Mola_mola
ENSCING00000008323	-	89	36.140	ENSMODG00000006561	POP1	81	39.759	Monodelphis_domestica
ENSCING00000008323	-	89	35.686	ENSMALG00000012621	POP1	80	33.333	Monopterus_albus
ENSCING00000008323	-	88	36.965	MGP_CAROLIEiJ_G0019726	Pop1	83	36.965	Mus_caroli
ENSCING00000008323	-	89	38.521	ENSMPUG00000015250	POP1	82	38.521	Mustela_putorius_furo
ENSCING00000008323	-	75	38.132	ENSMLUG00000010204	POP1	82	38.132	Myotis_lucifugus
ENSCING00000008323	-	89	37.209	ENSNGAG00000001582	Pop1	82	37.209	Nannospalax_galili
ENSCING00000008323	-	93	31.818	ENSNBRG00000002356	pop1	89	31.818	Neolamprologus_brichardi
ENSCING00000008323	-	96	32.759	ENSNLEG00000002541	POP1	87	33.956	Nomascus_leucogenys
ENSCING00000008323	-	65	40.400	ENSMEUG00000003118	POP1	78	40.400	Notamacropus_eugenii
ENSCING00000008323	-	90	38.790	ENSODEG00000003984	POP1	82	39.689	Octodon_degus
ENSCING00000008323	-	89	36.032	ENSONIG00000016445	pop1	82	36.437	Oreochromis_niloticus
ENSCING00000008323	-	90	36.749	ENSOGAG00000001466	POP1	82	38.132	Otolemur_garnettii
ENSCING00000008323	-	90	36.396	ENSPPAG00000018410	POP1	82	38.132	Pan_paniscus
ENSCING00000008323	-	89	37.743	ENSPPRG00000005002	POP1	82	37.743	Panthera_pardus
ENSCING00000008323	-	89	37.743	ENSPTIG00000016527	POP1	82	37.743	Panthera_tigris_altaica
ENSCING00000008323	-	90	36.396	ENSPTRG00000020458	POP1	82	38.132	Pan_troglodytes
ENSCING00000008323	-	77	36.396	ENSPANG00000009704	POP1	68	38.132	Papio_anubis
ENSCING00000008323	-	89	32.955	ENSPKIG00000016325	POP1	82	35.769	Paramormyrops_kingsleyae
ENSCING00000008323	-	87	38.956	ENSPSIG00000012343	POP1	81	38.956	Pelodiscus_sinensis
ENSCING00000008323	-	93	33.007	ENSPMGG00000022253	POP1	91	34.899	Periophthalmus_magnuspinnatus
ENSCING00000008323	-	89	36.576	ENSPEMG00000023633	Pop1	82	36.576	Peromyscus_maniculatus_bairdii
ENSCING00000008323	-	87	33.333	ENSPMAG00000003209	POP1	90	33.333	Petromyzon_marinus
ENSCING00000008323	-	74	38.956	ENSPCIG00000012216	POP1	81	38.956	Phascolarctos_cinereus
ENSCING00000008323	-	89	32.830	ENSPFOG00000012490	POP1	84	33.208	Poecilia_formosa
ENSCING00000008323	-	89	32.830	ENSPLAG00000004646	POP1	84	33.208	Poecilia_latipinna
ENSCING00000008323	-	96	31.024	ENSPMEG00000019592	POP1	89	31.325	Poecilia_mexicana
ENSCING00000008323	-	89	33.208	ENSPREG00000020951	POP1	83	33.585	Poecilia_reticulata
ENSCING00000008323	-	88	38.132	ENSPPYG00000018777	POP1	82	38.132	Pongo_abelii
ENSCING00000008323	-	90	35.789	ENSPCAG00000016662	POP1	82	38.132	Procavia_capensis
ENSCING00000008323	-	88	39.370	ENSPCOG00000019420	POP1	82	39.370	Propithecus_coquereli
ENSCING00000008323	-	76	37.319	ENSPVAG00000014468	POP1	82	39.200	Pteropus_vampyrus
ENSCING00000008323	-	88	36.220	ENSPNAG00000000265	pop1	67	36.220	Pygocentrus_nattereri
ENSCING00000008323	-	91	35.395	ENSRNOG00000005243	Pop1	86	35.395	Rattus_norvegicus
ENSCING00000008323	-	95	33.528	ENSRBIG00000007996	POP1	87	34.700	Rhinopithecus_bieti
ENSCING00000008323	-	90	36.396	ENSRROG00000012334	POP1	82	38.132	Rhinopithecus_roxellana
ENSCING00000008323	-	90	36.749	ENSSBOG00000020830	POP1	83	38.132	Saimiri_boliviensis_boliviensis
ENSCING00000008323	-	87	38.554	ENSSHAG00000000296	POP1	82	38.554	Sarcophilus_harrisii
ENSCING00000008323	-	91	33.569	ENSSFOG00015007429	pop1	83	33.803	Scleropages_formosus
ENSCING00000008323	-	87	35.223	ENSSDUG00000007817	POP1	82	35.628	Seriola_dumerili
ENSCING00000008323	-	87	36.437	ENSSLDG00000012565	POP1	82	36.842	Seriola_lalandi_dorsalis
ENSCING00000008323	-	92	32.509	ENSSPAG00000014955	pop1	89	32.509	Stegastes_partitus
ENSCING00000008323	-	90	36.042	ENSSSCG00000006078	POP1	82	37.743	Sus_scrofa
ENSCING00000008323	-	86	34.956	ENSTRUG00000010856	pop1	82	34.956	Takifugu_rubripes
ENSCING00000008323	-	89	33.721	ENSTNIG00000013297	pop1	87	33.852	Tetraodon_nigroviridis
ENSCING00000008323	-	85	40.541	ENSTBEG00000014214	POP1	83	40.359	Tupaia_belangeri
ENSCING00000008323	-	68	35.336	ENSTTRG00000016071	POP1	75	37.354	Tursiops_truncatus
ENSCING00000008323	-	88	37.698	ENSUAMG00000017309	POP1	85	37.698	Ursus_americanus
ENSCING00000008323	-	75	37.354	ENSUMAG00000016952	POP1	75	30.744	Ursus_maritimus
ENSCING00000008323	-	65	45.405	ENSVPAG00000008278	POP1	58	45.405	Vicugna_pacos
ENSCING00000008323	-	94	33.441	ENSVVUG00000010994	POP1	86	33.441	Vulpes_vulpes
ENSCING00000008323	-	73	32.883	ENSXCOG00000017043	POP1	80	33.333	Xiphophorus_couchianus
ENSCING00000008323	-	76	33.585	ENSXMAG00000002472	POP1	84	33.585	Xiphophorus_maculatus