EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008340 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2430 bases
Position: chr1:4292255-4294684
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017019	Methyltransf_31	PF13847.6	4.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017019	-	975	-	ENSCINP00000017019	325 (aa)	-	F7B499

Gene Model

Click here to download ENSCING00000008340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008340	-	86	49.822	ENSG00000101247	NDUFAF5	81	49.822	Homo_sapiens
ENSCING00000008340	-	91	48.148	ENSAPOG00000024361	ndufaf5	87	48.148	Acanthochromis_polyacanthus
ENSCING00000008340	-	89	48.276	ENSAMEG00000008837	NDUFAF5	83	48.276	Ailuropoda_melanoleuca
ENSCING00000008340	-	92	47.492	ENSACIG00000018247	ndufaf5	89	47.492	Amphilophus_citrinellus
ENSCING00000008340	-	91	47.475	ENSAPEG00000022351	ndufaf5	84	47.475	Amphiprion_percula
ENSCING00000008340	-	92	48.829	ENSATEG00000016301	ndufaf5	84	48.829	Anabas_testudineus
ENSCING00000008340	-	79	52.140	ENSAPLG00000012410	NDUFAF5	98	52.140	Anas_platyrhynchos
ENSCING00000008340	-	91	49.000	ENSACAG00000000870	NDUFAF5	91	49.000	Anolis_carolinensis
ENSCING00000008340	-	86	49.466	ENSANAG00000025436	NDUFAF5	81	49.466	Aotus_nancymaae
ENSCING00000008340	-	89	48.110	ENSACLG00000002961	ndufaf5	85	48.110	Astatotilapia_calliptera
ENSCING00000008340	-	89	48.276	ENSAMXG00000001169	ndufaf5	80	48.276	Astyanax_mexicanus
ENSCING00000008340	-	89	49.310	ENSBTAG00000004302	NDUFAF5	83	49.310	Bos_taurus
ENSCING00000008340	-	89	48.621	ENSCJAG00000004655	NDUFAF5	84	48.621	Callithrix_jacchus
ENSCING00000008340	-	89	48.276	ENSCAFG00000005571	NDUFAF5	83	48.276	Canis_familiaris
ENSCING00000008340	-	89	48.276	ENSCAFG00020027529	NDUFAF5	83	48.276	Canis_lupus_dingo
ENSCING00000008340	-	89	49.310	ENSCHIG00000019544	NDUFAF5	83	50.206	Capra_hircus
ENSCING00000008340	-	86	50.534	ENSTSYG00000010000	NDUFAF5	81	50.534	Carlito_syrichta
ENSCING00000008340	-	73	47.368	ENSCAPG00000012917	NDUFAF5	92	42.034	Cavia_aperea
ENSCING00000008340	-	89	46.897	ENSCPOG00000014030	NDUFAF5	84	46.897	Cavia_porcellus
ENSCING00000008340	-	86	50.534	ENSCATG00000036297	NDUFAF5	81	50.534	Cercocebus_atys
ENSCING00000008340	-	89	47.241	ENSCLAG00000015585	NDUFAF5	84	47.241	Chinchilla_lanigera
ENSCING00000008340	-	86	49.822	ENSCSAG00000011769	NDUFAF5	81	49.822	Chlorocebus_sabaeus
ENSCING00000008340	-	86	45.196	ENSCHOG00000007201	NDUFAF5	81	45.196	Choloepus_hoffmanni
ENSCING00000008340	-	90	47.279	ENSCPBG00000023288	NDUFAF5	84	47.138	Chrysemys_picta_bellii
ENSCING00000008340	-	89	47.931	ENSCGRG00001000888	Ndufaf5	83	47.931	Cricetulus_griseus_chok1gshd
ENSCING00000008340	-	89	47.931	ENSCGRG00000006297	-	83	47.931	Cricetulus_griseus_crigri
ENSCING00000008340	-	89	47.931	ENSCSEG00000001166	ndufaf5	83	47.931	Cynoglossus_semilaevis
ENSCING00000008340	-	95	47.097	ENSCVAG00000007958	ndufaf5	88	47.097	Cyprinodon_variegatus
ENSCING00000008340	-	98	48.125	ENSDARG00000061629	ndufaf5	95	48.125	Danio_rerio
ENSCING00000008340	-	86	49.822	ENSDNOG00000019414	NDUFAF5	81	49.822	Dasypus_novemcinctus
ENSCING00000008340	-	89	47.931	ENSDORG00000016314	Ndufaf5	83	47.931	Dipodomys_ordii
ENSCING00000008340	-	92	45.545	FBgn0033891	CG8067	90	45.545	Drosophila_melanogaster
ENSCING00000008340	-	86	49.822	ENSEASG00005001785	NDUFAF5	81	49.822	Equus_asinus_asinus
ENSCING00000008340	-	89	49.655	ENSECAG00000011021	NDUFAF5	85	47.744	Equus_caballus
ENSCING00000008340	-	89	51.034	ENSELUG00000000412	ndufaf5	77	51.034	Esox_lucius
ENSCING00000008340	-	89	48.966	ENSFCAG00000027094	NDUFAF5	83	48.966	Felis_catus
ENSCING00000008340	-	89	51.211	ENSFALG00000010903	NDUFAF5	84	51.211	Ficedula_albicollis
ENSCING00000008340	-	89	46.897	ENSFDAG00000015496	NDUFAF5	84	46.897	Fukomys_damarensis
ENSCING00000008340	-	90	51.712	ENSGALG00000020729	NDUFAF5	87	51.171	Gallus_gallus
ENSCING00000008340	-	89	47.931	ENSGAFG00000000563	ndufaf5	83	47.492	Gambusia_affinis
ENSCING00000008340	-	92	50.000	ENSGACG00000019689	ndufaf5	84	50.000	Gasterosteus_aculeatus
ENSCING00000008340	-	83	50.370	ENSGAGG00000008600	NDUFAF5	95	50.370	Gopherus_agassizii
ENSCING00000008340	-	86	49.466	ENSGGOG00000006702	NDUFAF5	81	49.466	Gorilla_gorilla
ENSCING00000008340	-	93	44.040	ENSHBUG00000001909	ndufaf5	94	44.040	Haplochromis_burtoni
ENSCING00000008340	-	89	47.241	ENSHGLG00000012482	NDUFAF5	84	47.241	Heterocephalus_glaber_female
ENSCING00000008340	-	89	47.241	ENSHGLG00100012870	NDUFAF5	84	47.241	Heterocephalus_glaber_male
ENSCING00000008340	-	92	48.829	ENSIPUG00000006437	ndufaf5	80	48.829	Ictalurus_punctatus
ENSCING00000008340	-	94	46.104	ENSSTOG00000009865	NDUFAF5	88	46.104	Ictidomys_tridecemlineatus
ENSCING00000008340	-	86	48.043	ENSJJAG00000021926	Ndufaf5	81	48.043	Jaculus_jaculus
ENSCING00000008340	-	63	46.569	ENSKMAG00000005075	ndufaf5	75	46.569	Kryptolebias_marmoratus
ENSCING00000008340	-	89	47.931	ENSLBEG00000022833	ndufaf5	84	47.931	Labrus_bergylta
ENSCING00000008340	-	95	49.515	ENSLACG00000016605	NDUFAF5	95	51.228	Latimeria_chalumnae
ENSCING00000008340	-	94	47.727	ENSLOCG00000015981	ndufaf5	85	47.727	Lepisosteus_oculatus
ENSCING00000008340	-	86	49.466	ENSLAFG00000005487	NDUFAF5	81	49.466	Loxodonta_africana
ENSCING00000008340	-	86	50.178	ENSMFAG00000044840	NDUFAF5	81	50.178	Macaca_fascicularis
ENSCING00000008340	-	86	50.178	ENSMMUG00000012354	NDUFAF5	81	50.178	Macaca_mulatta
ENSCING00000008340	-	86	50.534	ENSMNEG00000040246	NDUFAF5	81	50.534	Macaca_nemestrina
ENSCING00000008340	-	86	50.178	ENSMLEG00000029043	NDUFAF5	81	50.178	Mandrillus_leucophaeus
ENSCING00000008340	-	89	48.110	ENSMZEG00005013897	ndufaf5	85	48.110	Maylandia_zebra
ENSCING00000008340	-	76	53.226	ENSMGAG00000006004	NDUFAF5	97	53.226	Meleagris_gallopavo
ENSCING00000008340	-	89	48.276	ENSMAUG00000017597	Ndufaf5	84	48.276	Mesocricetus_auratus
ENSCING00000008340	-	89	48.797	ENSMICG00000011449	NDUFAF5	84	48.000	Microcebus_murinus
ENSCING00000008340	-	89	47.586	ENSMOCG00000000938	Ndufaf5	84	47.586	Microtus_ochrogaster
ENSCING00000008340	-	92	46.179	ENSMMOG00000018697	ndufaf5	87	46.179	Mola_mola
ENSCING00000008340	-	76	47.368	ENSMALG00000007286	ndufaf5	66	47.368	Monopterus_albus
ENSCING00000008340	-	89	47.586	MGP_CAROLIEiJ_G0024366	Ndufaf5	84	47.586	Mus_caroli
ENSCING00000008340	-	89	47.931	ENSMUSG00000027384	Ndufaf5	84	47.931	Mus_musculus
ENSCING00000008340	-	89	41.411	MGP_PahariEiJ_G0025812	Ndufaf5	85	41.411	Mus_pahari
ENSCING00000008340	-	89	47.931	MGP_SPRETEiJ_G0025286	Ndufaf5	84	47.931	Mus_spretus
ENSCING00000008340	-	89	48.966	ENSMPUG00000001446	NDUFAF5	83	48.966	Mustela_putorius_furo
ENSCING00000008340	-	86	50.178	ENSMLUG00000013089	NDUFAF5	81	50.178	Myotis_lucifugus
ENSCING00000008340	-	62	52.709	ENSNBRG00000020263	ndufaf5	50	52.709	Neolamprologus_brichardi
ENSCING00000008340	-	86	49.822	ENSNLEG00000014575	NDUFAF5	81	49.822	Nomascus_leucogenys
ENSCING00000008340	-	53	50.867	ENSOPRG00000001410	-	99	50.867	Ochotona_princeps
ENSCING00000008340	-	89	46.897	ENSODEG00000006100	NDUFAF5	84	46.897	Octodon_degus
ENSCING00000008340	-	89	46.897	ENSONIG00000006801	ndufaf5	84	46.897	Oreochromis_niloticus
ENSCING00000008340	-	76	52.016	ENSOANG00000008433	NDUFAF5	96	52.016	Ornithorhynchus_anatinus
ENSCING00000008340	-	89	50.000	ENSOCUG00000005419	NDUFAF5	83	50.000	Oryctolagus_cuniculus
ENSCING00000008340	-	92	46.488	ENSORLG00015022812	ndufaf5	86	46.488	Oryzias_latipes_hsok
ENSCING00000008340	-	92	47.492	ENSOMEG00000009351	ndufaf5	92	47.492	Oryzias_melastigma
ENSCING00000008340	-	89	48.966	ENSOGAG00000016916	NDUFAF5	83	48.966	Otolemur_garnettii
ENSCING00000008340	-	86	50.890	ENSOARG00000011254	NDUFAF5	82	50.890	Ovis_aries
ENSCING00000008340	-	86	49.822	ENSPPAG00000044089	NDUFAF5	81	49.822	Pan_paniscus
ENSCING00000008340	-	89	48.966	ENSPPRG00000012600	NDUFAF5	83	48.966	Panthera_pardus
ENSCING00000008340	-	89	48.966	ENSPTIG00000019550	NDUFAF5	83	48.966	Panthera_tigris_altaica
ENSCING00000008340	-	86	49.822	ENSPTRG00000013259	NDUFAF5	81	49.822	Pan_troglodytes
ENSCING00000008340	-	86	50.534	ENSPANG00000022387	NDUFAF5	81	50.534	Papio_anubis
ENSCING00000008340	-	92	50.502	ENSPKIG00000024484	ndufaf5	78	50.502	Paramormyrops_kingsleyae
ENSCING00000008340	-	66	52.778	ENSPSIG00000016473	NDUFAF5	95	52.778	Pelodiscus_sinensis
ENSCING00000008340	-	92	46.844	ENSPMGG00000016889	ndufaf5	97	43.871	Periophthalmus_magnuspinnatus
ENSCING00000008340	-	89	47.931	ENSPEMG00000018620	Ndufaf5	84	47.931	Peromyscus_maniculatus_bairdii
ENSCING00000008340	-	89	50.000	ENSPCIG00000019329	NDUFAF5	75	51.838	Phascolarctos_cinereus
ENSCING00000008340	-	89	49.310	ENSPFOG00000010169	ndufaf5	83	48.829	Poecilia_formosa
ENSCING00000008340	-	89	49.310	ENSPLAG00000006424	ndufaf5	83	48.829	Poecilia_latipinna
ENSCING00000008340	-	89	50.000	ENSPREG00000004464	ndufaf5	82	50.890	Poecilia_reticulata
ENSCING00000008340	-	86	49.822	ENSPPYG00000010716	NDUFAF5	61	49.822	Pongo_abelii
ENSCING00000008340	-	75	48.780	ENSPCAG00000013363	NDUFAF5	84	48.780	Procavia_capensis
ENSCING00000008340	-	89	43.793	ENSPVAG00000001297	NDUFAF5	81	44.840	Pteropus_vampyrus
ENSCING00000008340	-	85	43.682	ENSPNYG00000015685	ndufaf5	79	43.682	Pundamilia_nyererei
ENSCING00000008340	-	90	47.797	ENSPNAG00000003247	ndufaf5	86	46.580	Pygocentrus_nattereri
ENSCING00000008340	-	89	47.931	ENSRNOG00000004784	Ndufaf5	84	47.931	Rattus_norvegicus
ENSCING00000008340	-	86	50.178	ENSRBIG00000028518	NDUFAF5	81	50.178	Rhinopithecus_bieti
ENSCING00000008340	-	86	49.822	ENSRROG00000042190	NDUFAF5	81	49.822	Rhinopithecus_roxellana
ENSCING00000008340	-	86	49.822	ENSSBOG00000027006	NDUFAF5	81	49.822	Saimiri_boliviensis_boliviensis
ENSCING00000008340	-	75	52.439	ENSSHAG00000015542	NDUFAF5	96	52.439	Sarcophilus_harrisii
ENSCING00000008340	-	89	51.379	ENSSFOG00015010167	ndufaf5	93	51.379	Scleropages_formosus
ENSCING00000008340	-	89	48.443	ENSSMAG00000021065	ndufaf5	88	48.443	Scophthalmus_maximus
ENSCING00000008340	-	89	48.966	ENSSDUG00000019500	ndufaf5	80	48.966	Seriola_dumerili
ENSCING00000008340	-	94	48.366	ENSSPUG00000012616	NDUFAF5	96	48.366	Sphenodon_punctatus
ENSCING00000008340	-	93	47.351	ENSSPAG00000019035	ndufaf5	87	47.351	Stegastes_partitus
ENSCING00000008340	-	89	49.310	ENSSSCG00000007076	NDUFAF5	83	49.310	Sus_scrofa
ENSCING00000008340	-	89	47.260	ENSTGUG00000015623	-	93	47.260	Taeniopygia_guttata
ENSCING00000008340	-	89	50.519	ENSTGUG00000002444	-	93	48.123	Taeniopygia_guttata
ENSCING00000008340	-	91	47.315	ENSTRUG00000009337	ndufaf5	83	47.315	Takifugu_rubripes
ENSCING00000008340	-	88	47.038	ENSTNIG00000002738	ndufaf5	83	47.038	Tetraodon_nigroviridis
ENSCING00000008340	-	86	49.110	ENSTTRG00000005391	NDUFAF5	81	49.110	Tursiops_truncatus
ENSCING00000008340	-	83	50.368	ENSUAMG00000005927	NDUFAF5	81	50.368	Ursus_americanus
ENSCING00000008340	-	89	48.276	ENSUMAG00000008586	NDUFAF5	84	48.276	Ursus_maritimus
ENSCING00000008340	-	89	47.586	ENSVVUG00000014314	NDUFAF5	83	47.586	Vulpes_vulpes
ENSCING00000008340	-	84	48.375	ENSXETG00000008078	ndufaf5	73	48.432	Xenopus_tropicalis