EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008383 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 14504 bases
Position: chr11:3503733-3518236
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017117	Ribonuclease_3	PF00636.26	2.6e-60	1	2
ENSCINP00000017117	Ribonuclease_3	PF00636.26	2.6e-60	2	2
ENSCINP00000017117	PAZ	PF02170.22	8e-33	1	1
ENSCINP00000017117	Ribonucleas_3_3	PF14622.6	4.7e-26	1	1
ENSCINP00000017117	Dicer_dimer	PF03368.14	3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017117	-	5647	-	ENSCINP00000017117	1872 (aa)	-	F6XSF3

Gene Model

Click here to download ENSCING00000008383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008383	-	99	44.184	ENSG00000100697	DICER1	96	41.503	Homo_sapiens
ENSCING00000008383	-	90	55.134	ENSAPOG00000020381	dicer1	81	79.000	Acanthochromis_polyacanthus
ENSCING00000008383	-	99	44.247	ENSAMEG00000006447	DICER1	70	41.973	Ailuropoda_melanoleuca
ENSCING00000008383	-	99	41.292	ENSACIG00000000890	dicer1	89	60.305	Amphilophus_citrinellus
ENSCING00000008383	-	99	42.908	ENSAOCG00000023381	dicer1	81	79.000	Amphiprion_ocellaris
ENSCING00000008383	-	99	42.923	ENSAPEG00000022809	dicer1	81	79.000	Amphiprion_percula
ENSCING00000008383	-	99	43.876	ENSATEG00000014048	dicer1	90	61.323	Anabas_testudineus
ENSCING00000008383	-	99	44.583	ENSAPLG00000012407	DICER1	91	62.278	Anas_platyrhynchos
ENSCING00000008383	-	99	43.874	ENSACAG00000013033	DICER1	70	41.919	Anolis_carolinensis
ENSCING00000008383	-	99	44.236	ENSANAG00000023622	DICER1	96	41.923	Aotus_nancymaae
ENSCING00000008383	-	99	43.766	ENSACLG00000007920	dicer1	81	77.670	Astatotilapia_calliptera
ENSCING00000008383	-	90	54.028	ENSAMXG00000010730	dicer1	62	75.472	Astyanax_mexicanus
ENSCING00000008383	-	88	40.429	WBGene00000939	dcr-1	80	40.099	Caenorhabditis_elegans
ENSCING00000008383	-	99	44.392	ENSCJAG00000006225	DICER1	96	41.979	Callithrix_jacchus
ENSCING00000008383	-	87	50.512	ENSTSYG00000002044	DICER1	62	64.865	Carlito_syrichta
ENSCING00000008383	-	97	42.606	ENSCAPG00000000101	DICER1	91	61.421	Cavia_aperea
ENSCING00000008383	-	99	44.404	ENSCPOG00000004221	DICER1	97	44.632	Cavia_porcellus
ENSCING00000008383	-	99	44.184	ENSCCAG00000027063	DICER1	96	41.695	Cebus_capucinus
ENSCING00000008383	-	99	44.178	ENSCATG00000031403	DICER1	98	44.054	Cercocebus_atys
ENSCING00000008383	-	99	44.021	ENSCSAG00000010696	DICER1	98	44.002	Chlorocebus_sabaeus
ENSCING00000008383	-	75	41.538	ENSCHOG00000002136	DICER1	66	47.115	Choloepus_hoffmanni
ENSCING00000008383	-	96	48.073	ENSCPBG00000009859	DICER1	91	61.929	Chrysemys_picta_bellii
ENSCING00000008383	-	67	72.261	ENSCSAVG00000006137	-	99	72.500	Ciona_savignyi
ENSCING00000008383	-	99	44.631	ENSCGRG00001008088	Dicer1	91	61.421	Cricetulus_griseus_chok1gshd
ENSCING00000008383	-	99	44.631	ENSCGRG00000012281	Dicer1	91	61.421	Cricetulus_griseus_crigri
ENSCING00000008383	-	99	44.462	ENSCSEG00000017078	dicer1	89	61.168	Cynoglossus_semilaevis
ENSCING00000008383	-	99	43.969	ENSCVAG00000020035	dicer1	98	44.248	Cyprinodon_variegatus
ENSCING00000008383	-	99	44.733	ENSDARG00000001129	dicer1	98	44.427	Danio_rerio
ENSCING00000008383	-	99	44.427	ENSDORG00000006215	Dicer1	71	42.261	Dipodomys_ordii
ENSCING00000008383	-	85	58.416	FBgn0039016	Dcr-1	73	58.416	Drosophila_melanogaster
ENSCING00000008383	-	75	75.576	ENSETEG00000011000	DICER1	75	75.758	Echinops_telfairi
ENSCING00000008383	-	90	50.520	ENSEBUG00000013802	dicer1	83	72.816	Eptatretus_burgeri
ENSCING00000008383	-	99	43.956	ENSEASG00005021485	DICER1	91	61.266	Equus_asinus_asinus
ENSCING00000008383	-	99	43.851	ENSECAG00000006079	DICER1	92	61.266	Equus_caballus
ENSCING00000008383	-	99	43.508	ENSELUG00000024317	dicer1	98	42.266	Esox_lucius
ENSCING00000008383	-	95	55.106	ENSFCAG00000003535	DICER1	91	61.421	Felis_catus
ENSCING00000008383	-	99	44.932	ENSFALG00000002516	DICER1	98	44.671	Ficedula_albicollis
ENSCING00000008383	-	93	48.465	ENSFHEG00000016839	dicer1	98	42.485	Fundulus_heteroclitus
ENSCING00000008383	-	83	61.013	ENSGMOG00000006057	dicer1	79	64.865	Gadus_morhua
ENSCING00000008383	-	88	71.739	ENSGALG00000010999	DICER1	93	71.739	Gallus_gallus
ENSCING00000008383	-	99	43.851	ENSGAFG00000010728	dicer1	98	44.075	Gambusia_affinis
ENSCING00000008383	-	99	43.041	ENSGACG00000020134	dicer1	90	61.111	Gasterosteus_aculeatus
ENSCING00000008383	-	63	48.290	ENSGAGG00000016379	DICER1	88	61.675	Gopherus_agassizii
ENSCING00000008383	-	99	44.213	ENSGGOG00000003760	DICER1	96	41.503	Gorilla_gorilla
ENSCING00000008383	-	90	52.736	ENSHBUG00000018941	dicer1	81	77.670	Haplochromis_burtoni
ENSCING00000008383	-	99	43.186	ENSHCOG00000015738	dicer1	78	58.095	Hippocampus_comes
ENSCING00000008383	-	90	55.609	ENSIPUG00000005080	dicer1	98	44.230	Ictalurus_punctatus
ENSCING00000008383	-	99	43.944	ENSJJAG00000010766	Dicer1	70	41.852	Jaculus_jaculus
ENSCING00000008383	-	84	75.701	ENSKMAG00000001429	dicer1	94	75.701	Kryptolebias_marmoratus
ENSCING00000008383	-	90	52.664	ENSLBEG00000008928	dicer1	90	60.560	Labrus_bergylta
ENSCING00000008383	-	99	44.601	ENSLACG00000008302	DICER1	91	60.202	Latimeria_chalumnae
ENSCING00000008383	-	90	53.762	ENSLOCG00000008544	dicer1	75	61.578	Lepisosteus_oculatus
ENSCING00000008383	-	99	44.877	ENSLAFG00000013632	DICER1	98	43.440	Loxodonta_africana
ENSCING00000008383	-	99	44.073	ENSMFAG00000002987	DICER1	98	44.002	Macaca_fascicularis
ENSCING00000008383	-	99	44.073	ENSMMUG00000023305	DICER1	98	44.002	Macaca_mulatta
ENSCING00000008383	-	99	44.073	ENSMNEG00000021073	DICER1	98	44.002	Macaca_nemestrina
ENSCING00000008383	-	99	43.539	ENSMLEG00000034800	DICER1	96	41.923	Mandrillus_leucophaeus
ENSCING00000008383	-	99	42.974	ENSMAMG00000016806	dicer1	90	60.560	Mastacembelus_armatus
ENSCING00000008383	-	99	43.766	ENSMZEG00005016989	dicer1	81	77.670	Maylandia_zebra
ENSCING00000008383	-	99	44.178	ENSMGAG00000013207	DICER1	91	61.421	Meleagris_gallopavo
ENSCING00000008383	-	99	44.654	ENSMAUG00000009936	Dicer1	91	61.421	Mesocricetus_auratus
ENSCING00000008383	-	99	43.806	ENSMICG00000011690	DICER1	96	41.718	Microcebus_murinus
ENSCING00000008383	-	99	44.822	ENSMMOG00000018531	dicer1	98	44.903	Mola_mola
ENSCING00000008383	-	99	44.410	ENSMODG00000012624	DICER1	91	61.421	Monodelphis_domestica
ENSCING00000008383	-	99	43.253	ENSMALG00000009445	dicer1	90	61.168	Monopterus_albus
ENSCING00000008383	-	99	44.502	ENSMUSG00000041415	Dicer1	91	32.461	Mus_musculus
ENSCING00000008383	-	99	43.737	ENSMLUG00000003991	DICER1	91	59.950	Myotis_lucifugus
ENSCING00000008383	-	99	44.730	ENSNGAG00000010103	Dicer1	97	44.748	Nannospalax_galili
ENSCING00000008383	-	99	43.149	ENSNBRG00000022306	dicer1	76	61.266	Neolamprologus_brichardi
ENSCING00000008383	-	99	44.357	ENSNLEG00000017309	DICER1	96	41.559	Nomascus_leucogenys
ENSCING00000008383	-	64	72.072	ENSMEUG00000000614	-	66	78.000	Notamacropus_eugenii
ENSCING00000008383	-	91	52.226	ENSONIG00000010424	dicer1	81	70.339	Oreochromis_niloticus
ENSCING00000008383	-	99	44.618	ENSOANG00000012034	DICER1	70	42.211	Ornithorhynchus_anatinus
ENSCING00000008383	-	99	43.639	ENSOCUG00000010849	DICER1	91	60.500	Oryctolagus_cuniculus
ENSCING00000008383	-	91	50.502	ENSORLG00000011022	dicer1	90	60.051	Oryzias_latipes
ENSCING00000008383	-	91	50.502	ENSORLG00020021795	dicer1	90	60.051	Oryzias_latipes_hni
ENSCING00000008383	-	91	50.646	ENSORLG00015019667	dicer1	90	60.051	Oryzias_latipes_hsok
ENSCING00000008383	-	99	43.584	ENSOMEG00000018679	dicer1	90	61.111	Oryzias_melastigma
ENSCING00000008383	-	99	43.887	ENSPPRG00000001322	DICER1	91	61.421	Panthera_pardus
ENSCING00000008383	-	99	43.992	ENSPTIG00000008215	DICER1	91	61.421	Panthera_tigris_altaica
ENSCING00000008383	-	99	44.236	ENSPTRG00000023484	DICER1	96	41.503	Pan_troglodytes
ENSCING00000008383	-	99	44.073	ENSPANG00000023078	DICER1	91	61.675	Papio_anubis
ENSCING00000008383	-	99	43.711	ENSPKIG00000019962	dicer1	94	54.741	Paramormyrops_kingsleyae
ENSCING00000008383	-	99	43.555	ENSPSIG00000010801	DICER1	91	59.148	Pelodiscus_sinensis
ENSCING00000008383	-	99	43.429	ENSPMGG00000010210	dicer1	98	43.975	Periophthalmus_magnuspinnatus
ENSCING00000008383	-	99	44.584	ENSPEMG00000014125	Dicer1	91	61.421	Peromyscus_maniculatus_bairdii
ENSCING00000008383	-	99	43.896	ENSPFOG00000008531	dicer1	90	61.323	Poecilia_formosa
ENSCING00000008383	-	99	43.844	ENSPLAG00000008539	dicer1	89	61.323	Poecilia_latipinna
ENSCING00000008383	-	99	43.740	ENSPMEG00000014284	dicer1	90	61.069	Poecilia_mexicana
ENSCING00000008383	-	99	43.688	ENSPREG00000012120	dicer1	90	61.323	Poecilia_reticulata
ENSCING00000008383	-	77	51.286	ENSPCAG00000010828	DICER1	74	58.904	Procavia_capensis
ENSCING00000008383	-	99	43.939	ENSPCOG00000022909	DICER1	96	41.620	Propithecus_coquereli
ENSCING00000008383	-	90	42.042	ENSPVAG00000004811	DICER1	69	40.523	Pteropus_vampyrus
ENSCING00000008383	-	99	43.640	ENSPNYG00000017939	dicer1	81	77.670	Pundamilia_nyererei
ENSCING00000008383	-	90	54.690	ENSPNAG00000001012	dicer1	88	55.167	Pygocentrus_nattereri
ENSCING00000008383	-	99	44.613	ENSRNOG00000010711	Dicer1	78	61.364	Rattus_norvegicus
ENSCING00000008383	-	99	44.073	ENSRBIG00000020932	DICER1	98	44.054	Rhinopithecus_bieti
ENSCING00000008383	-	99	44.073	ENSRROG00000031891	DICER1	96	41.559	Rhinopithecus_roxellana
ENSCING00000008383	-	99	44.288	ENSSBOG00000028660	DICER1	96	41.615	Saimiri_boliviensis_boliviensis
ENSCING00000008383	-	92	55.047	ENSSHAG00000012077	DICER1	91	61.421	Sarcophilus_harrisii
ENSCING00000008383	-	90	54.618	ENSSFOG00015010804	dicer1	96	54.864	Scleropages_formosus
ENSCING00000008383	-	90	51.824	ENSSMAG00000015520	dicer1	81	77.670	Scophthalmus_maximus
ENSCING00000008383	-	99	43.588	ENSSDUG00000021652	dicer1	90	61.168	Seriola_dumerili
ENSCING00000008383	-	99	42.410	ENSSLDG00000012087	dicer1	98	42.454	Seriola_lalandi_dorsalis
ENSCING00000008383	-	99	44.322	ENSSPUG00000016222	DICER1	98	44.270	Sphenodon_punctatus
ENSCING00000008383	-	99	43.517	ENSSPAG00000017128	dicer1	80	79.000	Stegastes_partitus
ENSCING00000008383	-	99	44.258	ENSSSCG00000028225	DICER1	95	54.957	Sus_scrofa
ENSCING00000008383	-	99	44.932	ENSTGUG00000012658	DICER1	91	62.183	Taeniopygia_guttata
ENSCING00000008383	-	99	44.046	ENSTRUG00000006156	dicer1	90	61.168	Takifugu_rubripes
ENSCING00000008383	-	90	53.446	ENSTNIG00000005441	dicer1	81	78.000	Tetraodon_nigroviridis
ENSCING00000008383	-	86	50.159	ENSTBEG00000012374	DICER1	92	54.020	Tupaia_belangeri
ENSCING00000008383	-	94	48.533	ENSTTRG00000013044	DICER1	64	46.790	Tursiops_truncatus
ENSCING00000008383	-	96	43.079	ENSUAMG00000011912	DICER1	72	41.901	Ursus_americanus
ENSCING00000008383	-	99	43.766	ENSUMAG00000003027	DICER1	99	45.776	Ursus_maritimus
ENSCING00000008383	-	91	46.111	ENSVPAG00000006817	DICER1	64	60.152	Vicugna_pacos
ENSCING00000008383	-	99	44.468	ENSVVUG00000018855	DICER1	91	62.183	Vulpes_vulpes
ENSCING00000008383	-	99	44.199	ENSXETG00000023315	dicer1	70	41.474	Xenopus_tropicalis
ENSCING00000008383	-	93	72.768	ENSXCOG00000009353	dicer1	99	72.768	Xiphophorus_couchianus
ENSCING00000008383	-	99	43.734	ENSXMAG00000015721	dicer1	70	41.849	Xiphophorus_maculatus