EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008395 (Gene tree)
Gene ID: 100175965
Gene Symbol: -
Alias: -
Full Name: 39S ribosomal protein L3%2C mitochondrial-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2200 bases
Position: chr2:353235-355434
Accession: 100175965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017144	Ribosomal_L3	PF00297.22	1.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017144	-	1423	XM_002125615	ENSCINP00000017144	392 (aa)	XP_002125651	F6XR12

Gene Model

Click here to download ENSCING00000008395's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008395	-	75	46.959	ENSG00000114686	MRPL3	99	50.327	Homo_sapiens
ENSCING00000008395	-	74	45.946	ENSAPOG00000006179	mrpl3	89	45.946	Acanthochromis_polyacanthus
ENSCING00000008395	-	75	46.959	ENSAMEG00000014272	MRPL3	77	46.959	Ailuropoda_melanoleuca
ENSCING00000008395	-	74	46.284	ENSACIG00000015992	mrpl3	84	46.284	Amphilophus_citrinellus
ENSCING00000008395	-	53	34.434	ENSACIG00000009210	-	59	34.434	Amphilophus_citrinellus
ENSCING00000008395	-	74	45.608	ENSAOCG00000024456	mrpl3	84	45.608	Amphiprion_ocellaris
ENSCING00000008395	-	74	45.608	ENSAPEG00000015997	mrpl3	84	48.276	Amphiprion_percula
ENSCING00000008395	-	71	45.520	ENSATEG00000017145	mrpl3	85	45.302	Anabas_testudineus
ENSCING00000008395	-	76	44.333	ENSAPLG00000011128	MRPL3	92	44.333	Anas_platyrhynchos
ENSCING00000008395	-	77	46.382	ENSACAG00000001596	MRPL3	84	46.230	Anolis_carolinensis
ENSCING00000008395	-	75	44.595	ENSANAG00000023191	-	83	44.595	Aotus_nancymaae
ENSCING00000008395	-	75	47.297	ENSANAG00000021528	-	83	47.297	Aotus_nancymaae
ENSCING00000008395	-	71	45.035	ENSACLG00000020843	mrpl3	85	44.631	Astatotilapia_calliptera
ENSCING00000008395	-	76	46.000	ENSAMXG00000043612	mrpl3	84	46.000	Astyanax_mexicanus
ENSCING00000008395	-	75	47.297	ENSBTAG00000030942	MRPL3	83	47.297	Bos_taurus
ENSCING00000008395	-	60	31.727	WBGene00016142	mrps-18C	65	31.481	Caenorhabditis_elegans
ENSCING00000008395	-	75	47.297	ENSCJAG00000003143	MRPL3	83	47.297	Callithrix_jacchus
ENSCING00000008395	-	75	46.959	ENSCAFG00000006125	MRPL3	83	46.959	Canis_familiaris
ENSCING00000008395	-	75	46.959	ENSCAFG00020027448	MRPL3	83	46.959	Canis_lupus_dingo
ENSCING00000008395	-	75	46.959	ENSCHIG00000024783	MRPL3	83	46.959	Capra_hircus
ENSCING00000008395	-	75	46.622	ENSTSYG00000003691	MRPL3	83	46.622	Carlito_syrichta
ENSCING00000008395	-	77	42.857	ENSCAPG00000013574	MRPL3	85	42.857	Cavia_aperea
ENSCING00000008395	-	77	48.173	ENSCPOG00000021216	MRPL3	84	48.173	Cavia_porcellus
ENSCING00000008395	-	75	47.635	ENSCCAG00000030011	MRPL3	83	47.635	Cebus_capucinus
ENSCING00000008395	-	75	47.973	ENSCATG00000038023	MRPL3	83	47.973	Cercocebus_atys
ENSCING00000008395	-	77	48.505	ENSCLAG00000003513	MRPL3	84	48.505	Chinchilla_lanigera
ENSCING00000008395	-	75	47.973	ENSCSAG00000010510	MRPL3	83	47.973	Chlorocebus_sabaeus
ENSCING00000008395	-	76	47.333	ENSCPBG00000022852	MRPL3	84	47.333	Chrysemys_picta_bellii
ENSCING00000008395	-	72	84.698	ENSCSAVG00000006945	-	100	84.698	Ciona_savignyi
ENSCING00000008395	-	75	47.973	ENSCANG00000031568	MRPL3	83	47.973	Colobus_angolensis_palliatus
ENSCING00000008395	-	76	46.465	ENSCGRG00001016688	Mrpl3	83	46.465	Cricetulus_griseus_chok1gshd
ENSCING00000008395	-	76	46.465	ENSCGRG00000015457	Mrpl3	72	46.465	Cricetulus_griseus_crigri
ENSCING00000008395	-	76	43.434	ENSCSEG00000008636	mrpl3	85	43.434	Cynoglossus_semilaevis
ENSCING00000008395	-	73	44.983	ENSCVAG00000011820	mrpl3	85	44.667	Cyprinodon_variegatus
ENSCING00000008395	-	76	44.667	ENSDARG00000103318	mrpl3	85	44.667	Danio_rerio
ENSCING00000008395	-	75	47.297	ENSDNOG00000047253	MRPL3	82	47.297	Dasypus_novemcinctus
ENSCING00000008395	-	65	45.136	ENSDORG00000029436	Mrpl3	94	45.136	Dipodomys_ordii
ENSCING00000008395	-	79	32.432	FBgn0030686	mRpL3	88	33.333	Drosophila_melanogaster
ENSCING00000008395	-	80	41.009	ENSETEG00000010458	MRPL3	90	41.009	Echinops_telfairi
ENSCING00000008395	-	72	42.403	ENSEBUG00000009944	mrpl3	97	42.403	Eptatretus_burgeri
ENSCING00000008395	-	75	46.622	ENSEASG00005005550	MRPL3	80	46.622	Equus_asinus_asinus
ENSCING00000008395	-	75	46.284	ENSECAG00000016736	MRPL3	83	46.284	Equus_caballus
ENSCING00000008395	-	64	42.000	ENSEEUG00000015033	MRPL3	96	42.000	Erinaceus_europaeus
ENSCING00000008395	-	73	46.181	ENSELUG00000003470	mrpl3	81	48.819	Esox_lucius
ENSCING00000008395	-	78	45.574	ENSFCAG00000006335	MRPL3	86	45.574	Felis_catus
ENSCING00000008395	-	76	44.667	ENSFALG00000012506	MRPL3	86	44.667	Ficedula_albicollis
ENSCING00000008395	-	77	47.508	ENSFDAG00000017320	MRPL3	84	47.508	Fukomys_damarensis
ENSCING00000008395	-	76	46.333	ENSFHEG00000023451	mrpl3	87	46.959	Fundulus_heteroclitus
ENSCING00000008395	-	71	44.681	ENSGMOG00000017025	mrpl3	91	44.702	Gadus_morhua
ENSCING00000008395	-	76	43.333	ENSGALG00000040873	MRPL3	84	43.333	Gallus_gallus
ENSCING00000008395	-	76	46.026	ENSGAFG00000018445	mrpl3	84	46.026	Gambusia_affinis
ENSCING00000008395	-	76	45.695	ENSGACG00000006011	mrpl3	85	45.695	Gasterosteus_aculeatus
ENSCING00000008395	-	76	46.667	ENSGAGG00000019040	MRPL3	84	46.667	Gopherus_agassizii
ENSCING00000008395	-	75	46.959	ENSGGOG00000011128	MRPL3	83	46.959	Gorilla_gorilla
ENSCING00000008395	-	75	36.149	ENSGGOG00000025644	-	81	36.149	Gorilla_gorilla
ENSCING00000008395	-	71	44.681	ENSHBUG00000019966	mrpl3	85	44.295	Haplochromis_burtoni
ENSCING00000008395	-	77	48.173	ENSHGLG00000016782	MRPL3	84	48.173	Heterocephalus_glaber_female
ENSCING00000008395	-	77	48.173	ENSHGLG00100014743	MRPL3	84	48.173	Heterocephalus_glaber_male
ENSCING00000008395	-	75	45.819	ENSHCOG00000011011	mrpl3	85	45.819	Hippocampus_comes
ENSCING00000008395	-	76	44.667	ENSIPUG00000011902	mrpl3	84	44.667	Ictalurus_punctatus
ENSCING00000008395	-	76	47.475	ENSSTOG00000012804	MRPL3	83	47.475	Ictidomys_tridecemlineatus
ENSCING00000008395	-	75	46.959	ENSJJAG00000006706	Mrpl3	83	46.959	Jaculus_jaculus
ENSCING00000008395	-	73	48.097	ENSKMAG00000002193	mrpl3	86	48.197	Kryptolebias_marmoratus
ENSCING00000008395	-	76	45.333	ENSLBEG00000000445	mrpl3	85	45.333	Labrus_bergylta
ENSCING00000008395	-	77	44.884	ENSLOCG00000001514	mrpl3	87	44.884	Lepisosteus_oculatus
ENSCING00000008395	-	75	47.635	ENSLAFG00000012176	MRPL3	83	47.635	Loxodonta_africana
ENSCING00000008395	-	75	47.635	ENSMFAG00000003455	MRPL3	83	47.635	Macaca_fascicularis
ENSCING00000008395	-	75	47.635	ENSMMUG00000000220	MRPL3	83	47.635	Macaca_mulatta
ENSCING00000008395	-	75	47.973	ENSMNEG00000042711	MRPL3	83	47.973	Macaca_nemestrina
ENSCING00000008395	-	75	47.973	ENSMLEG00000029925	MRPL3	83	47.973	Mandrillus_leucophaeus
ENSCING00000008395	-	74	46.644	ENSMAMG00000010715	mrpl3	84	46.644	Mastacembelus_armatus
ENSCING00000008395	-	71	45.035	ENSMZEG00005006750	mrpl3	85	44.631	Maylandia_zebra
ENSCING00000008395	-	76	43.000	ENSMGAG00000011444	MRPL3	93	43.000	Meleagris_gallopavo
ENSCING00000008395	-	76	47.138	ENSMAUG00000006653	Mrpl3	83	47.138	Mesocricetus_auratus
ENSCING00000008395	-	75	42.761	ENSMICG00000033138	-	84	42.761	Microcebus_murinus
ENSCING00000008395	-	75	46.959	ENSMICG00000049541	-	83	46.959	Microcebus_murinus
ENSCING00000008395	-	76	47.475	ENSMOCG00000019372	Mrpl3	83	47.475	Microtus_ochrogaster
ENSCING00000008395	-	67	46.591	ENSMMOG00000019894	mrpl3	88	44.068	Mola_mola
ENSCING00000008395	-	78	45.752	ENSMODG00000011873	MRPL3	85	45.752	Monodelphis_domestica
ENSCING00000008395	-	74	47.119	ENSMALG00000017620	mrpl3	87	47.119	Monopterus_albus
ENSCING00000008395	-	75	46.622	MGP_CAROLIEiJ_G0032601	Mrpl3	84	47.059	Mus_caroli
ENSCING00000008395	-	75	46.622	ENSMUSG00000032563	Mrpl3	84	47.059	Mus_musculus
ENSCING00000008395	-	75	46.622	MGP_PahariEiJ_G0015469	Mrpl3	83	46.622	Mus_pahari
ENSCING00000008395	-	75	46.959	MGP_SPRETEiJ_G0033747	Mrpl3	84	47.059	Mus_spretus
ENSCING00000008395	-	78	46.230	ENSMPUG00000010052	MRPL3	86	46.230	Mustela_putorius_furo
ENSCING00000008395	-	78	45.955	ENSMLUG00000008515	MRPL3	86	45.955	Myotis_lucifugus
ENSCING00000008395	-	75	47.635	ENSNGAG00000010660	Mrpl3	83	47.635	Nannospalax_galili
ENSCING00000008395	-	71	45.070	ENSNBRG00000009401	mrpl3	85	44.667	Neolamprologus_brichardi
ENSCING00000008395	-	75	47.635	ENSNLEG00000002810	MRPL3	83	47.635	Nomascus_leucogenys
ENSCING00000008395	-	75	39.394	ENSMEUG00000016391	MRPL3	91	39.394	Notamacropus_eugenii
ENSCING00000008395	-	75	42.568	ENSOPRG00000000501	MRPL3	91	42.568	Ochotona_princeps
ENSCING00000008395	-	79	47.419	ENSODEG00000018670	-	87	47.419	Octodon_degus
ENSCING00000008395	-	69	47.778	ENSODEG00000018142	-	86	47.778	Octodon_degus
ENSCING00000008395	-	71	45.423	ENSONIG00000002051	mrpl3	74	45.485	Oreochromis_niloticus
ENSCING00000008395	-	60	49.160	ENSOANG00000006770	MRPL3	95	49.160	Ornithorhynchus_anatinus
ENSCING00000008395	-	75	46.622	ENSOCUG00000002951	MRPL3	83	46.622	Oryctolagus_cuniculus
ENSCING00000008395	-	79	45.367	ENSORLG00000003736	mrpl3	88	45.367	Oryzias_latipes
ENSCING00000008395	-	72	45.775	ENSORLG00020002193	mrpl3	88	45.016	Oryzias_latipes_hni
ENSCING00000008395	-	79	45.048	ENSORLG00015012654	mrpl3	88	45.048	Oryzias_latipes_hsok
ENSCING00000008395	-	74	46.644	ENSOMEG00000015235	mrpl3	84	46.644	Oryzias_melastigma
ENSCING00000008395	-	75	46.622	ENSOGAG00000016133	MRPL3	79	46.622	Otolemur_garnettii
ENSCING00000008395	-	75	46.959	ENSOARG00000009221	MRPL3	79	46.959	Ovis_aries
ENSCING00000008395	-	75	39.865	ENSPPAG00000034479	-	82	39.604	Pan_paniscus
ENSCING00000008395	-	75	46.622	ENSPPAG00000015358	MRPL3	83	46.622	Pan_paniscus
ENSCING00000008395	-	78	45.574	ENSPPRG00000015417	MRPL3	86	45.574	Panthera_pardus
ENSCING00000008395	-	78	45.574	ENSPTIG00000012251	MRPL3	79	45.574	Panthera_tigris_altaica
ENSCING00000008395	-	75	46.959	ENSPTRG00000015396	MRPL3	83	46.959	Pan_troglodytes
ENSCING00000008395	-	75	39.865	ENSPTRG00000045519	-	81	39.865	Pan_troglodytes
ENSCING00000008395	-	75	47.973	ENSPANG00000017085	MRPL3	83	47.973	Papio_anubis
ENSCING00000008395	-	77	45.098	ENSPKIG00000023678	mrpl3	86	45.098	Paramormyrops_kingsleyae
ENSCING00000008395	-	61	49.583	ENSPSIG00000002908	MRPL3	96	49.583	Pelodiscus_sinensis
ENSCING00000008395	-	70	45.652	ENSPMGG00000023558	mrpl3	85	47.266	Periophthalmus_magnuspinnatus
ENSCING00000008395	-	76	47.811	ENSPEMG00000012061	Mrpl3	83	47.811	Peromyscus_maniculatus_bairdii
ENSCING00000008395	-	78	43.607	ENSPMAG00000003407	mrpl3	93	43.607	Petromyzon_marinus
ENSCING00000008395	-	75	45.455	ENSPCIG00000023992	MRPL3	85	45.455	Phascolarctos_cinereus
ENSCING00000008395	-	76	45.515	ENSPFOG00000002850	mrpl3	85	45.515	Poecilia_formosa
ENSCING00000008395	-	76	45.667	ENSPLAG00000002981	mrpl3	84	45.667	Poecilia_latipinna
ENSCING00000008395	-	76	45.667	ENSPMEG00000002060	mrpl3	84	45.667	Poecilia_mexicana
ENSCING00000008395	-	76	45.333	ENSPREG00000003943	mrpl3	84	45.333	Poecilia_reticulata
ENSCING00000008395	-	75	46.284	ENSPPYG00000014102	MRPL3	83	46.284	Pongo_abelii
ENSCING00000008395	-	75	33.784	ENSPCAG00000008624	MRPL3	83	33.784	Procavia_capensis
ENSCING00000008395	-	75	46.959	ENSPCOG00000017228	MRPL3	83	46.959	Propithecus_coquereli
ENSCING00000008395	-	78	46.230	ENSPVAG00000012966	MRPL3	85	46.230	Pteropus_vampyrus
ENSCING00000008395	-	71	43.972	ENSPNYG00000008358	mrpl3	85	43.624	Pundamilia_nyererei
ENSCING00000008395	-	76	46.000	ENSPNAG00000000723	mrpl3	85	46.000	Pygocentrus_nattereri
ENSCING00000008395	-	75	47.297	ENSRNOG00000012650	Mrpl3	83	47.297	Rattus_norvegicus
ENSCING00000008395	-	75	47.635	ENSRBIG00000033474	MRPL3	83	47.635	Rhinopithecus_bieti
ENSCING00000008395	-	75	47.635	ENSRROG00000040393	MRPL3	83	47.635	Rhinopithecus_roxellana
ENSCING00000008395	-	54	32.558	YGR220C	MRPL9	79	32.558	Saccharomyces_cerevisiae
ENSCING00000008395	-	76	47.475	ENSSBOG00000021018	MRPL3	83	47.475	Saimiri_boliviensis_boliviensis
ENSCING00000008395	-	78	44.118	ENSSHAG00000000330	MRPL3	93	44.118	Sarcophilus_harrisii
ENSCING00000008395	-	77	47.541	ENSSFOG00015023683	mrpl3	92	47.541	Scleropages_formosus
ENSCING00000008395	-	84	42.687	ENSSMAG00000011689	mrpl3	94	42.687	Scophthalmus_maximus
ENSCING00000008395	-	72	46.831	ENSSDUG00000007598	mrpl3	83	46.758	Seriola_dumerili
ENSCING00000008395	-	72	46.479	ENSSLDG00000008264	mrpl3	83	46.416	Seriola_lalandi_dorsalis
ENSCING00000008395	-	75	37.838	ENSSARG00000003782	MRPL3	84	37.838	Sorex_araneus
ENSCING00000008395	-	78	45.574	ENSSPUG00000002872	MRPL3	85	45.574	Sphenodon_punctatus
ENSCING00000008395	-	76	45.638	ENSSPAG00000021726	mrpl3	85	45.638	Stegastes_partitus
ENSCING00000008395	-	75	46.959	ENSSSCG00000011179	MRPL3	72	46.959	Sus_scrofa
ENSCING00000008395	-	62	45.714	ENSTGUG00000004204	-	98	45.714	Taeniopygia_guttata
ENSCING00000008395	-	74	45.973	ENSTRUG00000009650	mrpl3	85	45.973	Takifugu_rubripes
ENSCING00000008395	-	70	46.953	ENSTNIG00000006434	mrpl3	85	46.488	Tetraodon_nigroviridis
ENSCING00000008395	-	75	42.568	ENSTTRG00000010358	MRPL3	83	42.568	Tursiops_truncatus
ENSCING00000008395	-	75	46.959	ENSUAMG00000000526	MRPL3	82	46.959	Ursus_americanus
ENSCING00000008395	-	75	46.959	ENSUMAG00000017621	MRPL3	74	46.959	Ursus_maritimus
ENSCING00000008395	-	75	33.446	ENSVPAG00000012253	MRPL3	91	33.446	Vicugna_pacos
ENSCING00000008395	-	75	47.297	ENSVVUG00000002847	MRPL3	83	47.297	Vulpes_vulpes
ENSCING00000008395	-	76	42.667	ENSXETG00000001845	mrpl3	85	42.667	Xenopus_tropicalis
ENSCING00000008395	-	70	44.727	ENSXCOG00000020178	mrpl3	84	44.727	Xiphophorus_couchianus
ENSCING00000008395	-	73	44.948	ENSXMAG00000002586	mrpl3	85	45.246	Xiphophorus_maculatus