EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008473 (Gene tree)
Gene ID: 100175025
Gene Symbol: -
Alias: -
Full Name: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2651 bases
Position: chr2:1838211-1840861
Accession: 100175025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017279	FtsJ	PF01728.19	9.7e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017279	-	1260	XM_002127619	ENSCINP00000017279	322 (aa)	XP_002127655	F6TQG1

Gene Model

Click here to download ENSCING00000008473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008473	-	99	66.562	ENSG00000068438	FTSJ1	95	66.562	Homo_sapiens
ENSCING00000008473	-	92	79.661	ENSAPOG00000018541	ftsj1	93	79.661	Acanthochromis_polyacanthus
ENSCING00000008473	-	97	67.302	ENSAMEG00000012735	FTSJ1	93	67.302	Ailuropoda_melanoleuca
ENSCING00000008473	-	92	78.305	ENSACIG00000001541	ftsj1	93	78.305	Amphilophus_citrinellus
ENSCING00000008473	-	92	78.333	ENSAOCG00000009380	ftsj1	93	78.333	Amphiprion_ocellaris
ENSCING00000008473	-	92	78.000	ENSAPEG00000020434	ftsj1	93	78.000	Amphiprion_percula
ENSCING00000008473	-	92	78.595	ENSATEG00000008408	ftsj1	93	78.930	Anabas_testudineus
ENSCING00000008473	-	84	76.015	ENSACAG00000016605	FTSJ1	90	76.015	Anolis_carolinensis
ENSCING00000008473	-	99	64.062	ENSANAG00000035537	-	94	68.041	Aotus_nancymaae
ENSCING00000008473	-	99	66.250	ENSANAG00000030571	-	95	66.250	Aotus_nancymaae
ENSCING00000008473	-	92	78.333	ENSACLG00000014226	ftsj1	93	78.333	Astatotilapia_calliptera
ENSCING00000008473	-	93	80.201	ENSAMXG00000037663	ftsj1	92	80.201	Astyanax_mexicanus
ENSCING00000008473	-	82	66.288	ENSBTAG00000046593	-	86	65.918	Bos_taurus
ENSCING00000008473	-	97	63.259	ENSBTAG00000031829	FTSJ1	93	63.259	Bos_taurus
ENSCING00000008473	-	91	54.426	WBGene00011281	R74.7	88	54.426	Caenorhabditis_elegans
ENSCING00000008473	-	99	66.250	ENSCJAG00000002256	FTSJ1	95	66.250	Callithrix_jacchus
ENSCING00000008473	-	97	67.732	ENSCAFG00000015339	FTSJ1	93	67.732	Canis_familiaris
ENSCING00000008473	-	97	67.732	ENSCAFG00020021351	FTSJ1	93	67.732	Canis_lupus_dingo
ENSCING00000008473	-	97	67.732	ENSCHIG00000000441	-	93	67.732	Capra_hircus
ENSCING00000008473	-	97	56.508	ENSCHIG00000017370	-	93	56.508	Capra_hircus
ENSCING00000008473	-	82	66.920	ENSCHIG00000021392	-	86	66.920	Capra_hircus
ENSCING00000008473	-	97	68.051	ENSTSYG00000029207	FTSJ1	93	68.051	Carlito_syrichta
ENSCING00000008473	-	92	60.135	ENSCAPG00000011705	FTSJ1	94	60.135	Cavia_aperea
ENSCING00000008473	-	92	71.284	ENSCPOG00000030576	FTSJ1	94	68.153	Cavia_porcellus
ENSCING00000008473	-	92	70.847	ENSCCAG00000027731	FTSJ1	88	70.847	Cebus_capucinus
ENSCING00000008473	-	92	71.186	ENSCATG00000013045	FTSJ1	88	71.186	Cercocebus_atys
ENSCING00000008473	-	92	71.284	ENSCLAG00000011582	FTSJ1	89	71.284	Chinchilla_lanigera
ENSCING00000008473	-	92	70.847	ENSCSAG00000013278	FTSJ1	88	70.847	Chlorocebus_sabaeus
ENSCING00000008473	-	92	89.803	ENSCSAVG00000010259	-	97	89.803	Ciona_savignyi
ENSCING00000008473	-	92	71.525	ENSCANG00000033841	FTSJ1	88	71.525	Colobus_angolensis_palliatus
ENSCING00000008473	-	99	68.125	ENSCGRG00001023654	Ftsj1	96	68.125	Cricetulus_griseus_chok1gshd
ENSCING00000008473	-	99	67.812	ENSCGRG00000007253	Ftsj1	95	67.812	Cricetulus_griseus_crigri
ENSCING00000008473	-	92	64.214	ENSCSEG00000018843	ftsj1	90	64.214	Cynoglossus_semilaevis
ENSCING00000008473	-	94	74.919	ENSCVAG00000009618	ftsj1	97	74.919	Cyprinodon_variegatus
ENSCING00000008473	-	92	78.983	ENSDARG00000057089	ftsj1	100	84.615	Danio_rerio
ENSCING00000008473	-	92	69.492	ENSDNOG00000047923	-	88	69.492	Dasypus_novemcinctus
ENSCING00000008473	-	82	47.925	ENSDNOG00000044320	-	98	44.937	Dasypus_novemcinctus
ENSCING00000008473	-	96	67.742	ENSDORG00000000074	Ftsj1	97	67.742	Dipodomys_ordii
ENSCING00000008473	-	100	49.538	FBgn0038861	CG7009	98	49.538	Drosophila_melanogaster
ENSCING00000008473	-	78	62.055	FBgn0038471	CG5220	83	62.055	Drosophila_melanogaster
ENSCING00000008473	-	69	61.435	ENSETEG00000014092	-	65	61.435	Echinops_telfairi
ENSCING00000008473	-	92	50.508	ENSETEG00000018343	-	89	50.508	Echinops_telfairi
ENSCING00000008473	-	71	73.043	ENSEBUG00000005843	ftsj1	72	73.043	Eptatretus_burgeri
ENSCING00000008473	-	56	64.641	ENSEASG00005008272	FTSJ1	66	63.102	Equus_asinus_asinus
ENSCING00000008473	-	92	71.525	ENSECAG00000019260	FTSJ1	93	68.371	Equus_caballus
ENSCING00000008473	-	92	72.881	ENSEEUG00000001469	FTSJ1	99	72.881	Erinaceus_europaeus
ENSCING00000008473	-	92	79.866	ENSELUG00000011483	ftsj1	89	79.866	Esox_lucius
ENSCING00000008473	-	97	67.732	ENSFCAG00000026453	FTSJ1	93	67.732	Felis_catus
ENSCING00000008473	-	92	70.508	ENSFDAG00000011250	FTSJ1	88	70.508	Fukomys_damarensis
ENSCING00000008473	-	92	78.667	ENSFHEG00000008464	ftsj1	99	75.000	Fundulus_heteroclitus
ENSCING00000008473	-	92	78.451	ENSGMOG00000004562	ftsj1	99	78.451	Gadus_morhua
ENSCING00000008473	-	66	78.673	ENSGAFG00000002036	ftsj1	93	78.673	Gambusia_affinis
ENSCING00000008473	-	92	78.114	ENSGACG00000008843	ftsj1	92	78.114	Gasterosteus_aculeatus
ENSCING00000008473	-	99	66.562	ENSGGOG00000028552	FTSJ1	95	66.562	Gorilla_gorilla
ENSCING00000008473	-	92	78.333	ENSHBUG00000015883	ftsj1	93	78.333	Haplochromis_burtoni
ENSCING00000008473	-	92	70.847	ENSHGLG00000003132	FTSJ1	89	70.847	Heterocephalus_glaber_female
ENSCING00000008473	-	92	70.847	ENSHGLG00100014682	FTSJ1	89	70.847	Heterocephalus_glaber_male
ENSCING00000008473	-	92	78.114	ENSHCOG00000010145	ftsj1	94	78.114	Hippocampus_comes
ENSCING00000008473	-	92	78.983	ENSIPUG00000005052	FTSJ1	92	78.983	Ictalurus_punctatus
ENSCING00000008473	-	99	66.562	ENSSTOG00000027717	FTSJ1	95	66.250	Ictidomys_tridecemlineatus
ENSCING00000008473	-	97	66.026	ENSJJAG00000011596	-	99	66.026	Jaculus_jaculus
ENSCING00000008473	-	99	65.938	ENSJJAG00000014517	-	95	65.625	Jaculus_jaculus
ENSCING00000008473	-	93	78.859	ENSKMAG00000000645	ftsj1	93	78.859	Kryptolebias_marmoratus
ENSCING00000008473	-	92	78.333	ENSLBEG00000005293	ftsj1	84	78.333	Labrus_bergylta
ENSCING00000008473	-	80	80.882	ENSLACG00000009913	FTSJ1	76	80.882	Latimeria_chalumnae
ENSCING00000008473	-	93	78.523	ENSLOCG00000015688	ftsj1	88	78.523	Lepisosteus_oculatus
ENSCING00000008473	-	92	68.475	ENSLAFG00000032618	FTSJ1	88	68.475	Loxodonta_africana
ENSCING00000008473	-	99	66.562	ENSMFAG00000003467	FTSJ1	95	66.562	Macaca_fascicularis
ENSCING00000008473	-	92	71.186	ENSMMUG00000018894	FTSJ1	88	71.186	Macaca_mulatta
ENSCING00000008473	-	92	71.186	ENSMNEG00000044348	FTSJ1	88	71.186	Macaca_nemestrina
ENSCING00000008473	-	92	70.847	ENSMLEG00000016789	FTSJ1	88	70.847	Mandrillus_leucophaeus
ENSCING00000008473	-	92	79.392	ENSMAMG00000022841	ftsj1	89	79.392	Mastacembelus_armatus
ENSCING00000008473	-	92	78.333	ENSMZEG00005022583	ftsj1	93	78.333	Maylandia_zebra
ENSCING00000008473	-	99	68.438	ENSMAUG00000015442	Ftsj1	96	68.438	Mesocricetus_auratus
ENSCING00000008473	-	92	71.525	ENSMICG00000036228	-	98	71.525	Microcebus_murinus
ENSCING00000008473	-	93	66.777	ENSMOCG00000020523	-	93	66.777	Microtus_ochrogaster
ENSCING00000008473	-	70	76.339	ENSMOCG00000000507	-	100	76.339	Microtus_ochrogaster
ENSCING00000008473	-	92	70.034	ENSMOCG00000021218	-	95	65.938	Microtus_ochrogaster
ENSCING00000008473	-	92	75.421	ENSMMOG00000018969	ftsj1	93	75.421	Mola_mola
ENSCING00000008473	-	92	73.737	ENSMODG00000011356	FTSJ1	99	73.737	Monodelphis_domestica
ENSCING00000008473	-	92	78.041	ENSMALG00000014209	ftsj1	93	78.041	Monopterus_albus
ENSCING00000008473	-	98	69.401	MGP_CAROLIEiJ_G0032918	Ftsj1	96	69.401	Mus_caroli
ENSCING00000008473	-	98	69.401	ENSMUSG00000031171	Ftsj1	96	69.401	Mus_musculus
ENSCING00000008473	-	98	69.085	MGP_PahariEiJ_G0031467	Ftsj1	96	69.085	Mus_pahari
ENSCING00000008473	-	98	69.716	MGP_SPRETEiJ_G0034067	Ftsj1	96	69.716	Mus_spretus
ENSCING00000008473	-	98	67.619	ENSMPUG00000013493	FTSJ1	94	67.619	Mustela_putorius_furo
ENSCING00000008473	-	92	70.370	ENSMLUG00000003977	FTSJ1	88	70.370	Myotis_lucifugus
ENSCING00000008473	-	92	70.847	ENSNGAG00000018629	-	88	70.847	Nannospalax_galili
ENSCING00000008473	-	92	66.441	ENSNGAG00000016847	-	88	66.441	Nannospalax_galili
ENSCING00000008473	-	92	70.783	ENSNBRG00000012481	ftsj1	94	70.783	Neolamprologus_brichardi
ENSCING00000008473	-	99	61.875	ENSNLEG00000007816	FTSJ1	95	61.875	Nomascus_leucogenys
ENSCING00000008473	-	99	66.875	ENSODEG00000009855	FTSJ1	96	66.875	Octodon_degus
ENSCING00000008473	-	92	77.483	ENSONIG00000003966	ftsj1	96	77.483	Oreochromis_niloticus
ENSCING00000008473	-	88	41.404	ENSOANG00000013572	-	98	41.404	Ornithorhynchus_anatinus
ENSCING00000008473	-	92	71.186	ENSOCUG00000008009	-	87	71.186	Oryctolagus_cuniculus
ENSCING00000008473	-	92	69.831	ENSOCUG00000023277	-	90	69.831	Oryctolagus_cuniculus
ENSCING00000008473	-	92	68.814	ENSOCUG00000024620	-	90	68.814	Oryctolagus_cuniculus
ENSCING00000008473	-	93	77.852	ENSORLG00000028355	ftsj1	95	77.852	Oryzias_latipes
ENSCING00000008473	-	93	77.517	ENSORLG00020007897	ftsj1	95	77.517	Oryzias_latipes_hni
ENSCING00000008473	-	93	76.923	ENSOMEG00000018497	ftsj1	87	76.923	Oryzias_melastigma
ENSCING00000008473	-	92	62.373	ENSOGAG00000016174	-	93	59.425	Otolemur_garnettii
ENSCING00000008473	-	92	70.169	ENSOGAG00000032641	-	90	70.169	Otolemur_garnettii
ENSCING00000008473	-	83	65.299	ENSOARG00000012099	-	85	65.299	Ovis_aries
ENSCING00000008473	-	97	67.732	ENSOARG00000012432	-	93	67.732	Ovis_aries
ENSCING00000008473	-	99	66.562	ENSPPAG00000028540	FTSJ1	95	66.562	Pan_paniscus
ENSCING00000008473	-	99	66.562	ENSPPRG00000000249	FTSJ1	95	66.562	Panthera_pardus
ENSCING00000008473	-	97	67.732	ENSPTIG00000017680	FTSJ1	93	67.732	Panthera_tigris_altaica
ENSCING00000008473	-	99	66.562	ENSPTRG00000049433	FTSJ1	95	66.562	Pan_troglodytes
ENSCING00000008473	-	92	71.186	ENSPANG00000010102	FTSJ1	88	71.186	Papio_anubis
ENSCING00000008473	-	92	77.815	ENSPKIG00000019318	ftsj1	88	77.815	Paramormyrops_kingsleyae
ENSCING00000008473	-	88	53.659	ENSPSIG00000007020	FTSJ1	100	53.659	Pelodiscus_sinensis
ENSCING00000008473	-	99	67.610	ENSPEMG00000015698	-	95	67.610	Peromyscus_maniculatus_bairdii
ENSCING00000008473	-	92	65.878	ENSPEMG00000013262	-	91	65.878	Peromyscus_maniculatus_bairdii
ENSCING00000008473	-	92	76.271	ENSPMAG00000006943	FTSJ1	99	76.271	Petromyzon_marinus
ENSCING00000008473	-	98	70.064	ENSPCIG00000007236	FTSJ1	98	70.064	Phascolarctos_cinereus
ENSCING00000008473	-	92	76.949	ENSPFOG00000017003	ftsj1	94	76.949	Poecilia_formosa
ENSCING00000008473	-	81	80.769	ENSPLAG00000016190	ftsj1	91	80.769	Poecilia_latipinna
ENSCING00000008473	-	99	72.414	ENSPMEG00000021719	ftsj1	100	72.414	Poecilia_mexicana
ENSCING00000008473	-	92	77.288	ENSPREG00000016616	ftsj1	94	77.288	Poecilia_reticulata
ENSCING00000008473	-	92	70.169	ENSPCOG00000018822	-	88	70.169	Propithecus_coquereli
ENSCING00000008473	-	92	71.525	ENSPCOG00000022716	-	93	71.525	Propithecus_coquereli
ENSCING00000008473	-	64	59.524	ENSPVAG00000015621	FTSJ1	62	59.524	Pteropus_vampyrus
ENSCING00000008473	-	92	78.333	ENSPNYG00000011144	ftsj1	93	78.333	Pundamilia_nyererei
ENSCING00000008473	-	92	80.000	ENSPNAG00000016330	ftsj1	91	80.000	Pygocentrus_nattereri
ENSCING00000008473	-	98	68.139	ENSRNOG00000004776	Ftsj1	95	68.139	Rattus_norvegicus
ENSCING00000008473	-	92	71.525	ENSRBIG00000027511	FTSJ1	88	71.525	Rhinopithecus_bieti
ENSCING00000008473	-	92	71.525	ENSRROG00000029757	FTSJ1	88	71.525	Rhinopithecus_roxellana
ENSCING00000008473	-	91	53.247	YBR061C	TRM7	99	53.247	Saccharomyces_cerevisiae
ENSCING00000008473	-	92	70.847	ENSSBOG00000028146	FTSJ1	88	70.847	Saimiri_boliviensis_boliviensis
ENSCING00000008473	-	92	72.391	ENSSHAG00000012607	FTSJ1	95	72.391	Sarcophilus_harrisii
ENSCING00000008473	-	92	77.258	ENSSFOG00015006275	ftsj1	87	77.258	Scleropages_formosus
ENSCING00000008473	-	92	79.661	ENSSMAG00000001754	ftsj1	93	79.661	Scophthalmus_maximus
ENSCING00000008473	-	92	75.932	ENSSDUG00000015226	ftsj1	93	75.932	Seriola_dumerili
ENSCING00000008473	-	92	78.305	ENSSLDG00000019859	ftsj1	93	78.305	Seriola_lalandi_dorsalis
ENSCING00000008473	-	92	70.847	ENSSARG00000007091	-	91	70.847	Sorex_araneus
ENSCING00000008473	-	78	66.534	ENSSARG00000007246	-	97	66.534	Sorex_araneus
ENSCING00000008473	-	92	78.000	ENSSPAG00000022047	ftsj1	93	78.000	Stegastes_partitus
ENSCING00000008473	-	99	66.875	ENSSSCG00000025599	FTSJ1	95	66.875	Sus_scrofa
ENSCING00000008473	-	92	78.305	ENSTRUG00000016142	ftsj1	92	78.305	Takifugu_rubripes
ENSCING00000008473	-	92	78.305	ENSTNIG00000010402	ftsj1	94	78.305	Tetraodon_nigroviridis
ENSCING00000008473	-	97	66.134	ENSTTRG00000009027	FTSJ1	93	66.134	Tursiops_truncatus
ENSCING00000008473	-	97	67.732	ENSUAMG00000013296	FTSJ1	91	67.732	Ursus_americanus
ENSCING00000008473	-	97	61.342	ENSUMAG00000007966	FTSJ1	93	61.342	Ursus_maritimus
ENSCING00000008473	-	99	66.562	ENSVVUG00000017640	FTSJ1	95	66.562	Vulpes_vulpes
ENSCING00000008473	-	92	73.559	ENSXCOG00000003344	ftsj1	89	73.559	Xiphophorus_couchianus
ENSCING00000008473	-	92	78.305	ENSXMAG00000009372	ftsj1	95	78.305	Xiphophorus_maculatus