EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008497 (Gene tree)
Gene ID: 100175441
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 8072 bases
Position: chr11:4091505-4099576
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017328	tRNA-synt_1g	PF09334.11	2e-20	1	1
ENSCINP00000017328	Anticodon_1	PF08264.13	8.8e-19	1	1
ENSCINP00000017328	tRNA-synt_1	PF00133.22	1.5e-160	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017328	-	3006	-	ENSCINP00000017328	953 (aa)	-	F7B2M5

Gene Model

Click here to download ENSCING00000008497's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008497	-	98	45.350	ENSG00000067704	IARS2	94	45.350	Homo_sapiens
ENSCING00000008497	-	98	45.246	ENSAPOG00000007331	iars2	94	45.246	Acanthochromis_polyacanthus
ENSCING00000008497	-	98	44.943	ENSAMEG00000010055	IARS2	94	44.943	Ailuropoda_melanoleuca
ENSCING00000008497	-	99	43.537	ENSACIG00000004676	iars2	94	43.537	Amphilophus_citrinellus
ENSCING00000008497	-	98	46.458	ENSAOCG00000011811	iars2	95	46.458	Amphiprion_ocellaris
ENSCING00000008497	-	98	46.562	ENSAPEG00000003588	iars2	95	46.562	Amphiprion_percula
ENSCING00000008497	-	98	46.146	ENSATEG00000012272	iars2	94	46.146	Anabas_testudineus
ENSCING00000008497	-	93	46.171	ENSAPLG00000004136	IARS2	99	46.171	Anas_platyrhynchos
ENSCING00000008497	-	94	46.552	ENSACAG00000001566	IARS2	99	46.552	Anolis_carolinensis
ENSCING00000008497	-	98	43.365	ENSANAG00000013146	IARS2	94	43.365	Aotus_nancymaae
ENSCING00000008497	-	98	44.087	ENSACLG00000014763	iars2	94	44.087	Astatotilapia_calliptera
ENSCING00000008497	-	98	46.778	ENSACLG00000006953	-	94	46.778	Astatotilapia_calliptera
ENSCING00000008497	-	97	45.789	ENSAMXG00000018899	iars2	93	45.789	Astyanax_mexicanus
ENSCING00000008497	-	98	45.322	ENSBTAG00000012582	IARS2	94	45.322	Bos_taurus
ENSCING00000008497	-	97	33.641	WBGene00002153	iars-2	95	33.709	Caenorhabditis_elegans
ENSCING00000008497	-	95	44.214	ENSCJAG00000036768	IARS2	99	44.214	Callithrix_jacchus
ENSCING00000008497	-	96	45.551	ENSCAFG00000010952	IARS2	99	45.551	Canis_familiaris
ENSCING00000008497	-	98	45.492	ENSCAFG00020004022	IARS2	95	45.492	Canis_lupus_dingo
ENSCING00000008497	-	98	45.218	ENSCHIG00000022986	IARS2	94	45.218	Capra_hircus
ENSCING00000008497	-	98	45.873	ENSTSYG00000007722	IARS2	94	45.873	Carlito_syrichta
ENSCING00000008497	-	85	41.757	ENSCAPG00000016129	IARS2	92	41.757	Cavia_aperea
ENSCING00000008497	-	98	43.483	ENSCPOG00000012942	IARS2	94	43.483	Cavia_porcellus
ENSCING00000008497	-	91	46.441	ENSCCAG00000021848	IARS2	90	46.441	Cebus_capucinus
ENSCING00000008497	-	98	43.344	ENSCATG00000043392	IARS2	94	43.344	Cercocebus_atys
ENSCING00000008497	-	94	46.004	ENSCLAG00000003537	IARS2	99	46.004	Chinchilla_lanigera
ENSCING00000008497	-	98	44.041	ENSCSAG00000015833	IARS2	94	44.041	Chlorocebus_sabaeus
ENSCING00000008497	-	97	44.013	ENSCHOG00000007208	IARS2	94	44.013	Choloepus_hoffmanni
ENSCING00000008497	-	98	45.851	ENSCPBG00000000463	IARS2	96	45.851	Chrysemys_picta_bellii
ENSCING00000008497	-	98	62.449	ENSCSAVG00000004988	-	100	68.798	Ciona_savignyi
ENSCING00000008497	-	98	45.322	ENSCANG00000039390	IARS2	94	45.322	Colobus_angolensis_palliatus
ENSCING00000008497	-	98	45.664	ENSCGRG00001023111	Iars2	94	45.664	Cricetulus_griseus_chok1gshd
ENSCING00000008497	-	94	45.680	ENSCGRG00000014841	Iars2	99	45.680	Cricetulus_griseus_crigri
ENSCING00000008497	-	98	46.040	ENSCSEG00000000072	iars2	94	46.040	Cynoglossus_semilaevis
ENSCING00000008497	-	98	46.138	ENSCVAG00000006967	iars2	94	46.138	Cyprinodon_variegatus
ENSCING00000008497	-	99	45.258	ENSDARG00000044134	iars2	98	45.258	Danio_rerio
ENSCING00000008497	-	98	43.737	ENSDNOG00000001167	IARS2	94	43.737	Dasypus_novemcinctus
ENSCING00000008497	-	98	45.616	ENSDORG00000009975	Iars2	94	45.616	Dipodomys_ordii
ENSCING00000008497	-	98	38.542	FBgn0036569	IleRS-m	99	38.163	Drosophila_melanogaster
ENSCING00000008497	-	88	45.741	ENSETEG00000015309	IARS2	84	45.741	Echinops_telfairi
ENSCING00000008497	-	62	50.083	ENSEBUG00000014221	-	78	49.917	Eptatretus_burgeri
ENSCING00000008497	-	98	45.084	ENSEASG00005007698	IARS2	94	45.084	Equus_asinus_asinus
ENSCING00000008497	-	98	45.397	ENSECAG00000022576	IARS2	94	45.397	Equus_caballus
ENSCING00000008497	-	70	46.602	ENSEEUG00000014971	IARS2	85	46.602	Erinaceus_europaeus
ENSCING00000008497	-	98	46.002	ENSELUG00000002308	iars2	94	46.002	Esox_lucius
ENSCING00000008497	-	98	44.283	ENSFCAG00000002597	IARS2	94	44.283	Felis_catus
ENSCING00000008497	-	89	44.622	ENSFALG00000012124	IARS2	99	44.622	Ficedula_albicollis
ENSCING00000008497	-	94	44.589	ENSFDAG00000017577	IARS2	99	44.589	Fukomys_damarensis
ENSCING00000008497	-	98	45.124	ENSFHEG00000000205	iars2	94	45.124	Fundulus_heteroclitus
ENSCING00000008497	-	98	46.283	ENSGMOG00000016408	iars2	95	46.283	Gadus_morhua
ENSCING00000008497	-	98	46.258	ENSGALG00000009566	IARS2	95	46.258	Gallus_gallus
ENSCING00000008497	-	98	46.973	ENSGAFG00000019495	iars2	94	46.973	Gambusia_affinis
ENSCING00000008497	-	98	47.120	ENSGACG00000013305	iars2	94	47.120	Gasterosteus_aculeatus
ENSCING00000008497	-	95	45.887	ENSGAGG00000001959	IARS2	98	46.286	Gopherus_agassizii
ENSCING00000008497	-	98	45.559	ENSGGOG00000007340	IARS2	94	45.559	Gorilla_gorilla
ENSCING00000008497	-	98	45.426	ENSHBUG00000010898	iars2	94	45.426	Haplochromis_burtoni
ENSCING00000008497	-	97	44.806	ENSHGLG00000002201	IARS2	94	44.806	Heterocephalus_glaber_female
ENSCING00000008497	-	90	45.610	ENSHGLG00100011459	IARS2	98	45.610	Heterocephalus_glaber_male
ENSCING00000008497	-	98	46.283	ENSHCOG00000001452	iars2	94	46.283	Hippocampus_comes
ENSCING00000008497	-	97	44.889	ENSIPUG00000017082	iars2	94	44.889	Ictalurus_punctatus
ENSCING00000008497	-	98	45.921	ENSSTOG00000005879	IARS2	94	45.921	Ictidomys_tridecemlineatus
ENSCING00000008497	-	98	45.720	ENSJJAG00000017672	Iars2	94	45.720	Jaculus_jaculus
ENSCING00000008497	-	98	46.154	ENSKMAG00000002679	iars2	94	46.154	Kryptolebias_marmoratus
ENSCING00000008497	-	98	44.690	ENSLBEG00000003065	iars2	94	44.690	Labrus_bergylta
ENSCING00000008497	-	98	45.605	ENSLACG00000012668	IARS2	95	45.605	Latimeria_chalumnae
ENSCING00000008497	-	80	30.212	ENSLOCG00000017033	IARS2	99	30.212	Lepisosteus_oculatus
ENSCING00000008497	-	97	46.113	ENSLAFG00000011090	IARS2	95	46.113	Loxodonta_africana
ENSCING00000008497	-	98	45.768	ENSMFAG00000000345	IARS2	94	45.768	Macaca_fascicularis
ENSCING00000008497	-	98	45.768	ENSMMUG00000007783	IARS2	94	45.768	Macaca_mulatta
ENSCING00000008497	-	98	42.312	ENSMNEG00000038908	IARS2	94	42.312	Macaca_nemestrina
ENSCING00000008497	-	98	43.550	ENSMLEG00000002798	IARS2	94	43.550	Mandrillus_leucophaeus
ENSCING00000008497	-	98	46.960	ENSMAMG00000015306	iars2	94	46.960	Mastacembelus_armatus
ENSCING00000008497	-	98	46.778	ENSMZEG00005014151	iars2	94	46.778	Maylandia_zebra
ENSCING00000008497	-	94	46.825	ENSMGAG00000009158	IARS2	99	46.825	Meleagris_gallopavo
ENSCING00000008497	-	98	43.828	ENSMAUG00000012822	Iars2	94	43.828	Mesocricetus_auratus
ENSCING00000008497	-	98	45.265	ENSMICG00000017746	IARS2	94	45.265	Microcebus_murinus
ENSCING00000008497	-	98	45.816	ENSMOCG00000017822	Iars2	94	45.816	Microtus_ochrogaster
ENSCING00000008497	-	99	46.736	ENSMMOG00000005010	iars2	95	46.736	Mola_mola
ENSCING00000008497	-	98	44.756	ENSMODG00000004467	IARS2	94	44.756	Monodelphis_domestica
ENSCING00000008497	-	98	46.722	ENSMALG00000012599	iars2	95	46.722	Monopterus_albus
ENSCING00000008497	-	98	45.816	MGP_CAROLIEiJ_G0015021	Iars2	91	50.074	Mus_caroli
ENSCING00000008497	-	98	45.502	ENSMUSG00000026618	Iars2	91	49.630	Mus_musculus
ENSCING00000008497	-	98	45.816	MGP_PahariEiJ_G0028253	Iars2	91	49.926	Mus_pahari
ENSCING00000008497	-	98	45.397	MGP_SPRETEiJ_G0015821	Iars2	91	49.481	Mus_spretus
ENSCING00000008497	-	98	45.293	ENSMPUG00000004100	IARS2	88	45.293	Mustela_putorius_furo
ENSCING00000008497	-	94	45.189	ENSMLUG00000007322	IARS2	93	45.189	Myotis_lucifugus
ENSCING00000008497	-	98	45.502	ENSNGAG00000004930	Iars2	94	45.502	Nannospalax_galili
ENSCING00000008497	-	98	46.570	ENSNBRG00000024204	iars2	94	46.570	Neolamprologus_brichardi
ENSCING00000008497	-	98	45.502	ENSNLEG00000013853	IARS2	94	45.502	Nomascus_leucogenys
ENSCING00000008497	-	58	41.573	ENSMEUG00000007251	-	55	41.573	Notamacropus_eugenii
ENSCING00000008497	-	63	56.742	ENSOPRG00000014398	IARS2	61	56.742	Ochotona_princeps
ENSCING00000008497	-	94	44.973	ENSODEG00000014882	IARS2	92	44.973	Octodon_degus
ENSCING00000008497	-	98	46.466	ENSONIG00000012252	iars2	99	46.162	Oreochromis_niloticus
ENSCING00000008497	-	89	44.318	ENSOANG00000001426	IARS2	99	44.318	Ornithorhynchus_anatinus
ENSCING00000008497	-	95	45.533	ENSOCUG00000010419	IARS2	99	45.533	Oryctolagus_cuniculus
ENSCING00000008497	-	98	45.729	ENSORLG00000017813	iars2	95	45.729	Oryzias_latipes
ENSCING00000008497	-	98	45.625	ENSORLG00020014946	iars2	94	45.625	Oryzias_latipes_hni
ENSCING00000008497	-	98	45.625	ENSORLG00015011515	iars2	95	45.625	Oryzias_latipes_hsok
ENSCING00000008497	-	98	46.458	ENSOMEG00000019477	iars2	95	46.458	Oryzias_melastigma
ENSCING00000008497	-	98	37.243	ENSOGAG00000011364	IARS2	94	37.243	Otolemur_garnettii
ENSCING00000008497	-	95	45.064	ENSOARG00000012333	IARS2	98	45.064	Ovis_aries
ENSCING00000008497	-	98	45.559	ENSPPAG00000029870	IARS2	94	45.559	Pan_paniscus
ENSCING00000008497	-	98	45.530	ENSPPRG00000012244	IARS2	94	45.530	Panthera_pardus
ENSCING00000008497	-	95	45.356	ENSPTIG00000002279	IARS2	99	45.356	Panthera_tigris_altaica
ENSCING00000008497	-	98	45.559	ENSPTRG00000001997	IARS2	94	45.559	Pan_troglodytes
ENSCING00000008497	-	98	45.873	ENSPANG00000020678	IARS2	94	45.873	Papio_anubis
ENSCING00000008497	-	98	46.771	ENSPKIG00000022381	iars2	94	46.771	Paramormyrops_kingsleyae
ENSCING00000008497	-	90	44.330	ENSPSIG00000006220	IARS2	99	44.761	Pelodiscus_sinensis
ENSCING00000008497	-	51	40.600	ENSPMGG00000006183	iars2	89	40.600	Periophthalmus_magnuspinnatus
ENSCING00000008497	-	98	46.130	ENSPEMG00000000136	Iars2	94	46.130	Peromyscus_maniculatus_bairdii
ENSCING00000008497	-	98	37.998	ENSPMAG00000001894	iars2	95	37.692	Petromyzon_marinus
ENSCING00000008497	-	98	43.268	ENSPCIG00000008692	IARS2	100	42.206	Phascolarctos_cinereus
ENSCING00000008497	-	98	47.077	ENSPFOG00000007310	iars2	95	46.979	Poecilia_formosa
ENSCING00000008497	-	99	46.625	ENSPLAG00000013833	iars2	95	46.625	Poecilia_latipinna
ENSCING00000008497	-	98	47.077	ENSPMEG00000023132	iars2	86	47.077	Poecilia_mexicana
ENSCING00000008497	-	98	45.825	ENSPREG00000003827	iars2	89	45.621	Poecilia_reticulata
ENSCING00000008497	-	98	45.350	ENSPPYG00000000208	IARS2	94	45.350	Pongo_abelii
ENSCING00000008497	-	59	54.209	ENSPCAG00000016006	IARS2	56	54.209	Procavia_capensis
ENSCING00000008497	-	98	45.188	ENSPCOG00000019722	IARS2	94	45.188	Propithecus_coquereli
ENSCING00000008497	-	98	44.537	ENSPVAG00000013149	IARS2	95	44.537	Pteropus_vampyrus
ENSCING00000008497	-	98	46.570	ENSPNYG00000018793	iars2	94	46.570	Pundamilia_nyererei
ENSCING00000008497	-	97	43.519	ENSPNAG00000025742	iars2	96	43.519	Pygocentrus_nattereri
ENSCING00000008497	-	98	45.397	ENSRNOG00000002368	Iars2	91	49.037	Rattus_norvegicus
ENSCING00000008497	-	98	45.530	ENSRBIG00000002958	IARS2	94	45.530	Rhinopithecus_bieti
ENSCING00000008497	-	98	45.426	ENSRROG00000013275	IARS2	94	45.426	Rhinopithecus_roxellana
ENSCING00000008497	-	98	33.399	YPL040C	ISM1	98	33.399	Saccharomyces_cerevisiae
ENSCING00000008497	-	98	45.350	ENSSBOG00000020069	IARS2	94	45.350	Saimiri_boliviensis_boliviensis
ENSCING00000008497	-	98	44.731	ENSSHAG00000004762	IARS2	100	44.820	Sarcophilus_harrisii
ENSCING00000008497	-	98	42.797	ENSSFOG00015007814	iars2	98	42.797	Scleropages_formosus
ENSCING00000008497	-	98	47.114	ENSSMAG00000014304	iars2	85	47.114	Scophthalmus_maximus
ENSCING00000008497	-	98	46.250	ENSSDUG00000020153	iars2	94	46.250	Seriola_dumerili
ENSCING00000008497	-	98	46.250	ENSSLDG00000014169	iars2	95	46.250	Seriola_lalandi_dorsalis
ENSCING00000008497	-	94	43.413	ENSSARG00000012575	IARS2	99	43.413	Sorex_araneus
ENSCING00000008497	-	98	43.410	ENSSPUG00000009468	IARS2	96	43.678	Sphenodon_punctatus
ENSCING00000008497	-	98	45.994	ENSSPAG00000001847	iars2	95	45.994	Stegastes_partitus
ENSCING00000008497	-	97	45.798	ENSSSCG00000010823	IARS2	93	45.798	Sus_scrofa
ENSCING00000008497	-	98	45.171	ENSTGUG00000002764	IARS2	96	45.171	Taeniopygia_guttata
ENSCING00000008497	-	98	46.507	ENSTRUG00000004465	iars2	95	46.507	Takifugu_rubripes
ENSCING00000008497	-	98	46.451	ENSTNIG00000005422	iars2	98	46.451	Tetraodon_nigroviridis
ENSCING00000008497	-	84	50.877	ENSTBEG00000002312	IARS2	81	50.877	Tupaia_belangeri
ENSCING00000008497	-	86	51.908	ENSTTRG00000013026	IARS2	83	51.908	Tursiops_truncatus
ENSCING00000008497	-	98	45.084	ENSUAMG00000020811	IARS2	94	45.084	Ursus_americanus
ENSCING00000008497	-	75	55.263	ENSUMAG00000022077	IARS2	90	55.263	Ursus_maritimus
ENSCING00000008497	-	94	44.456	ENSVPAG00000008913	IARS2	99	44.456	Vicugna_pacos
ENSCING00000008497	-	98	45.285	ENSVVUG00000012804	IARS2	95	45.285	Vulpes_vulpes
ENSCING00000008497	-	98	44.433	ENSXETG00000002726	iars2	96	45.145	Xenopus_tropicalis
ENSCING00000008497	-	98	47.083	ENSXCOG00000011279	iars2	94	47.083	Xiphophorus_couchianus
ENSCING00000008497	-	98	47.188	ENSXMAG00000018636	iars2	94	47.188	Xiphophorus_maculatus