EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008613 (Gene tree)
Gene ID: 100178604
Gene Symbol: -
Alias: -
Full Name: la-related protein 6
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 7397 bases
Position: chrHT001102.1:15030-22426
Accession: 100178604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017569	La	PF05383.17	4.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017569	-	1900	XM_002130770	ENSCINP00000017569	490 (aa)	XP_002130806	F6TNT4

Gene Model

Click here to download ENSCING00000008613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008613's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008613	-	59	31.525	ENSAPOG00000003568	-	78	31.525	Acanthochromis_polyacanthus
ENSCING00000008613	-	87	33.700	ENSAMXG00000018956	larp6b	90	33.480	Astyanax_mexicanus
ENSCING00000008613	-	61	79.866	ENSCSAVG00000011718	-	99	79.866	Ciona_savignyi
ENSCING00000008613	-	87	33.933	ENSDARG00000003968	larp6b	77	50.000	Danio_rerio
ENSCING00000008613	-	91	32.909	ENSELUG00000021677	larp6b	85	33.254	Esox_lucius
ENSCING00000008613	-	87	32.237	ENSIPUG00000007609	larp6b	90	32.812	Ictalurus_punctatus
ENSCING00000008613	-	85	33.784	ENSPKIG00000025605	larp6b	87	33.259	Paramormyrops_kingsleyae
ENSCING00000008613	-	85	33.258	ENSPNAG00000023854	larp6b	88	33.409	Pygocentrus_nattereri