EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008630 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 62573 bases
Position: chr2:3970349-4032921
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017607	PABP	PF00658.18	2.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017607	-	8597	-	ENSCINP00000017607	2812 (aa)	-	F7AHP3

Gene Model

Click here to download ENSCING00000008630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008630's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008630	-	100	41.394	ENSG00000104517	UBR5	98	57.396	Homo_sapiens
ENSCING00000008630	-	100	40.338	ENSAPOG00000007770	ubr5	56	40.564	Acanthochromis_polyacanthus
ENSCING00000008630	-	100	41.075	ENSAMEG00000014808	UBR5	100	41.373	Ailuropoda_melanoleuca
ENSCING00000008630	-	91	40.749	ENSACIG00000003786	ubr5	51	40.713	Amphilophus_citrinellus
ENSCING00000008630	-	91	40.444	ENSAPEG00000007895	ubr5	51	40.760	Amphiprion_percula
ENSCING00000008630	-	99	40.993	ENSAPLG00000004191	UBR5	99	41.342	Anas_platyrhynchos
ENSCING00000008630	-	100	41.164	ENSANAG00000032305	UBR5	100	41.558	Aotus_nancymaae
ENSCING00000008630	-	100	40.687	ENSACLG00000011122	ubr5	55	40.725	Astatotilapia_calliptera
ENSCING00000008630	-	91	41.126	ENSAMXG00000020014	ubr5	51	40.899	Astyanax_mexicanus
ENSCING00000008630	-	100	41.073	ENSBTAG00000021209	UBR5	100	41.371	Bos_taurus
ENSCING00000008630	-	100	41.247	ENSCJAG00000015960	UBR5	100	41.641	Callithrix_jacchus
ENSCING00000008630	-	100	41.142	ENSCAFG00000000619	UBR5	100	41.440	Canis_familiaris
ENSCING00000008630	-	100	41.183	ENSCAFG00020000901	UBR5	100	41.411	Canis_lupus_dingo
ENSCING00000008630	-	100	41.073	ENSCHIG00000020937	UBR5	100	41.371	Capra_hircus
ENSCING00000008630	-	99	41.130	ENSTSYG00000011411	UBR5	99	41.589	Carlito_syrichta
ENSCING00000008630	-	94	50.123	ENSCPOG00000009637	UBR5	85	50.000	Cavia_porcellus
ENSCING00000008630	-	100	41.253	ENSCCAG00000037120	UBR5	100	41.552	Cebus_capucinus
ENSCING00000008630	-	100	41.136	ENSCATG00000035969	UBR5	100	41.529	Cercocebus_atys
ENSCING00000008630	-	99	41.179	ENSCLAG00000005604	UBR5	99	41.774	Chinchilla_lanigera
ENSCING00000008630	-	100	41.250	ENSCSAG00000011959	UBR5	100	41.644	Chlorocebus_sabaeus
ENSCING00000008630	-	77	67.110	ENSCHOG00000013701	UBR5	79	67.110	Choloepus_hoffmanni
ENSCING00000008630	-	100	41.059	ENSCPBG00000026166	UBR5	100	41.543	Chrysemys_picta_bellii
ENSCING00000008630	-	99	41.201	ENSCANG00000041171	UBR5	100	41.597	Colobus_angolensis_palliatus
ENSCING00000008630	-	84	50.183	ENSCGRG00001002960	Ubr5	85	50.493	Cricetulus_griseus_chok1gshd
ENSCING00000008630	-	56	39.683	ENSCGRG00000005867	Ubr5	54	41.032	Cricetulus_griseus_crigri
ENSCING00000008630	-	100	40.667	ENSCSEG00000008448	ubr5	54	40.736	Cynoglossus_semilaevis
ENSCING00000008630	-	91	41.260	ENSCVAG00000021987	ubr5	51	41.338	Cyprinodon_variegatus
ENSCING00000008630	-	100	40.824	ENSDARG00000018192	ubr5	55	41.291	Danio_rerio
ENSCING00000008630	-	99	40.260	ENSDNOG00000007897	UBR5	99	40.639	Dasypus_novemcinctus
ENSCING00000008630	-	99	41.081	ENSDORG00000007058	Ubr5	99	41.450	Dipodomys_ordii
ENSCING00000008630	-	95	45.322	FBgn0002431	hyd	76	45.322	Drosophila_melanogaster
ENSCING00000008630	-	71	55.556	ENSETEG00000020339	UBR5	68	49.265	Echinops_telfairi
ENSCING00000008630	-	100	41.160	ENSEASG00005001629	UBR5	100	41.549	Equus_asinus_asinus
ENSCING00000008630	-	91	40.836	ENSECAG00000015755	UBR5	100	40.461	Equus_caballus
ENSCING00000008630	-	91	40.682	ENSELUG00000005362	ubr5	51	40.672	Esox_lucius
ENSCING00000008630	-	100	41.280	ENSFCAG00000011214	UBR5	100	41.543	Felis_catus
ENSCING00000008630	-	99	41.038	ENSFALG00000005901	UBR5	99	41.514	Ficedula_albicollis
ENSCING00000008630	-	99	41.064	ENSFDAG00000014793	UBR5	99	41.545	Fukomys_damarensis
ENSCING00000008630	-	91	41.214	ENSFHEG00000019770	ubr5	51	41.220	Fundulus_heteroclitus
ENSCING00000008630	-	99	40.997	ENSGMOG00000018440	ubr5	55	41.188	Gadus_morhua
ENSCING00000008630	-	99	40.693	ENSGACG00000004642	ubr5	54	40.970	Gasterosteus_aculeatus
ENSCING00000008630	-	99	41.256	ENSGGOG00000003058	UBR5	99	41.652	Gorilla_gorilla
ENSCING00000008630	-	100	41.087	ENSHGLG00000010405	UBR5	100	41.506	Heterocephalus_glaber_female
ENSCING00000008630	-	99	41.221	ENSHGLG00100004167	UBR5	99	41.436	Heterocephalus_glaber_male
ENSCING00000008630	-	91	41.029	ENSHCOG00000014022	ubr5	51	40.997	Hippocampus_comes
ENSCING00000008630	-	99	41.360	ENSSTOG00000005328	UBR5	99	41.765	Ictidomys_tridecemlineatus
ENSCING00000008630	-	100	41.209	ENSJJAG00000013619	Ubr5	100	41.472	Jaculus_jaculus
ENSCING00000008630	-	100	40.451	ENSKMAG00000001452	ubr5	54	40.502	Kryptolebias_marmoratus
ENSCING00000008630	-	99	41.504	ENSLBEG00000024613	ubr5	100	40.357	Labrus_bergylta
ENSCING00000008630	-	100	40.851	ENSLACG00000012137	UBR5	100	41.112	Latimeria_chalumnae
ENSCING00000008630	-	100	40.558	ENSLOCG00000009882	ubr5	100	40.929	Lepisosteus_oculatus
ENSCING00000008630	-	100	41.164	ENSMFAG00000044216	UBR5	100	41.558	Macaca_fascicularis
ENSCING00000008630	-	100	41.310	ENSMMUG00000020766	UBR5	100	41.609	Macaca_mulatta
ENSCING00000008630	-	100	41.164	ENSMNEG00000028834	UBR5	100	41.558	Macaca_nemestrina
ENSCING00000008630	-	100	41.164	ENSMLEG00000039922	UBR5	100	41.558	Mandrillus_leucophaeus
ENSCING00000008630	-	91	41.051	ENSMZEG00005025460	ubr5	51	41.133	Maylandia_zebra
ENSCING00000008630	-	100	41.120	ENSMAUG00000018902	Ubr5	56	41.311	Mesocricetus_auratus
ENSCING00000008630	-	100	41.375	ENSMICG00000014824	UBR5	100	41.672	Microcebus_murinus
ENSCING00000008630	-	100	40.853	ENSMOCG00000019809	Ubr5	56	41.053	Microtus_ochrogaster
ENSCING00000008630	-	91	40.600	ENSMMOG00000018266	ubr5	51	40.253	Mola_mola
ENSCING00000008630	-	99	40.922	ENSMODG00000005976	UBR5	99	41.305	Monodelphis_domestica
ENSCING00000008630	-	91	40.726	ENSMALG00000008018	ubr5	51	40.446	Monopterus_albus
ENSCING00000008630	-	100	41.134	MGP_CAROLIEiJ_G0019748	Ubr5	100	41.423	Mus_caroli
ENSCING00000008630	-	100	41.325	ENSMUSG00000037487	Ubr5	100	41.543	Mus_musculus
ENSCING00000008630	-	100	41.325	MGP_PahariEiJ_G0019757	Ubr5	100	41.684	Mus_pahari
ENSCING00000008630	-	100	41.205	MGP_SPRETEiJ_G0020645	Ubr5	56	41.140	Mus_spretus
ENSCING00000008630	-	91	40.967	ENSMPUG00000015136	UBR5	51	40.415	Mustela_putorius_furo
ENSCING00000008630	-	99	41.407	ENSMLUG00000008052	UBR5	55	41.399	Myotis_lucifugus
ENSCING00000008630	-	100	41.176	ENSNGAG00000001915	Ubr5	100	41.474	Nannospalax_galili
ENSCING00000008630	-	99	41.166	ENSNLEG00000003404	UBR5	100	41.562	Nomascus_leucogenys
ENSCING00000008630	-	54	65.833	ENSMEUG00000004964	-	63	65.833	Notamacropus_eugenii
ENSCING00000008630	-	58	73.529	ENSOPRG00000004459	UBR5	64	73.529	Ochotona_princeps
ENSCING00000008630	-	100	41.114	ENSODEG00000001200	UBR5	100	41.543	Octodon_degus
ENSCING00000008630	-	100	41.080	ENSONIG00000016431	ubr5	55	41.677	Oreochromis_niloticus
ENSCING00000008630	-	91	40.748	ENSOANG00000013340	-	51	40.489	Ornithorhynchus_anatinus
ENSCING00000008630	-	100	40.759	ENSOCUG00000008549	UBR5	55	40.646	Oryctolagus_cuniculus
ENSCING00000008630	-	58	39.669	ENSORLG00000003009	ubr5	55	41.121	Oryzias_latipes
ENSCING00000008630	-	58	39.829	ENSORLG00015012347	ubr5	56	41.029	Oryzias_latipes_hsok
ENSCING00000008630	-	58	40.105	ENSOMEG00000014794	ubr5	61	41.349	Oryzias_melastigma
ENSCING00000008630	-	100	41.164	ENSOGAG00000004491	UBR5	100	41.558	Otolemur_garnettii
ENSCING00000008630	-	99	41.195	ENSOARG00000017554	UBR5	98	41.496	Ovis_aries
ENSCING00000008630	-	100	41.020	ENSPPAG00000040534	UBR5	100	41.346	Pan_paniscus
ENSCING00000008630	-	99	41.403	ENSPPRG00000001290	UBR5	100	41.670	Panthera_pardus
ENSCING00000008630	-	99	41.179	ENSPTIG00000016223	UBR5	99	41.444	Panthera_tigris_altaica
ENSCING00000008630	-	100	41.274	ENSPTRG00000020482	UBR5	100	41.572	Pan_troglodytes
ENSCING00000008630	-	100	41.250	ENSPANG00000017236	UBR5	100	41.644	Papio_anubis
ENSCING00000008630	-	100	40.068	ENSPKIG00000016015	UBR5	56	40.312	Paramormyrops_kingsleyae
ENSCING00000008630	-	85	43.298	ENSPKIG00000005940	ubr5	97	43.909	Paramormyrops_kingsleyae
ENSCING00000008630	-	99	40.997	ENSPSIG00000013244	UBR5	55	41.180	Pelodiscus_sinensis
ENSCING00000008630	-	100	40.395	ENSPMGG00000022205	ubr5	95	42.894	Periophthalmus_magnuspinnatus
ENSCING00000008630	-	100	40.990	ENSPEMG00000020823	Ubr5	100	41.245	Peromyscus_maniculatus_bairdii
ENSCING00000008630	-	91	41.139	ENSPFOG00000012957	ubr5	51	41.303	Poecilia_formosa
ENSCING00000008630	-	99	41.957	ENSPREG00000016584	ubr5	95	44.123	Poecilia_reticulata
ENSCING00000008630	-	92	53.715	ENSPPYG00000018797	UBR5	100	53.953	Pongo_abelii
ENSCING00000008630	-	77	49.301	ENSPCAG00000001160	UBR5	75	49.568	Procavia_capensis
ENSCING00000008630	-	100	40.495	ENSPCOG00000014399	UBR5	100	40.792	Propithecus_coquereli
ENSCING00000008630	-	84	72.483	ENSPVAG00000012646	UBR5	83	72.483	Pteropus_vampyrus
ENSCING00000008630	-	87	40.593	ENSRNOG00000006816	Ubr5	99	40.879	Rattus_norvegicus
ENSCING00000008630	-	100	40.851	ENSRROG00000040919	UBR5	100	41.243	Rhinopithecus_roxellana
ENSCING00000008630	-	100	41.158	ENSSBOG00000025123	UBR5	100	41.552	Saimiri_boliviensis_boliviensis
ENSCING00000008630	-	100	40.900	ENSSHAG00000017701	UBR5	100	41.383	Sarcophilus_harrisii
ENSCING00000008630	-	91	40.670	ENSSMAG00000010194	ubr5	50	40.045	Scophthalmus_maximus
ENSCING00000008630	-	91	40.759	ENSSDUG00000008072	ubr5	51	40.882	Seriola_dumerili
ENSCING00000008630	-	100	40.851	ENSSLDG00000013014	ubr5	55	40.590	Seriola_lalandi_dorsalis
ENSCING00000008630	-	86	67.910	ENSSARG00000000171	UBR5	84	67.910	Sorex_araneus
ENSCING00000008630	-	91	40.578	ENSSPAG00000015131	ubr5	51	40.522	Stegastes_partitus
ENSCING00000008630	-	100	41.138	ENSSSCG00000022479	UBR5	100	41.506	Sus_scrofa
ENSCING00000008630	-	99	40.950	ENSTGUG00000012099	UBR5	55	41.397	Taeniopygia_guttata
ENSCING00000008630	-	86	53.945	ENSTRUG00000010399	ubr5	76	54.254	Takifugu_rubripes
ENSCING00000008630	-	93	53.465	ENSTNIG00000013292	ubr5	77	53.960	Tetraodon_nigroviridis
ENSCING00000008630	-	70	82.857	ENSTBEG00000015656	UBR5	86	82.857	Tupaia_belangeri
ENSCING00000008630	-	83	58.511	ENSTTRG00000000492	UBR5	83	58.511	Tursiops_truncatus
ENSCING00000008630	-	98	41.156	ENSUMAG00000017960	UBR5	99	41.532	Ursus_maritimus
ENSCING00000008630	-	90	45.318	ENSVPAG00000008376	UBR5	90	45.552	Vicugna_pacos
ENSCING00000008630	-	98	41.352	ENSVVUG00000013461	UBR5	99	41.585	Vulpes_vulpes
ENSCING00000008630	-	100	40.843	ENSXETG00000031995	UBR5	56	40.932	Xenopus_tropicalis
ENSCING00000008630	-	74	38.917	ENSXCOG00000017034	ubr5	54	42.636	Xiphophorus_couchianus