EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008741 (Gene tree)
Gene ID: 445730
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3132 bases
Position: chr7:4549163-4552294
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017819	DcpS_C	PF11969.8	5.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017819	-	1413	-	ENSCINP00000017819	380 (aa)	-	F6TMD1

Gene Model

Click here to download ENSCING00000008741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008741	-	98	40.160	ENSG00000137074	APTX	93	54.348	Homo_sapiens
ENSCING00000008741	-	95	39.612	ENSAPOG00000008785	aptx	98	39.612	Acanthochromis_polyacanthus
ENSCING00000008741	-	94	40.111	ENSAMEG00000007648	APTX	93	40.111	Ailuropoda_melanoleuca
ENSCING00000008741	-	95	36.927	ENSACIG00000002035	aptx	98	36.927	Amphilophus_citrinellus
ENSCING00000008741	-	95	38.462	ENSAOCG00000000634	aptx	98	38.462	Amphiprion_ocellaris
ENSCING00000008741	-	95	38.462	ENSAPEG00000017253	aptx	98	38.462	Amphiprion_percula
ENSCING00000008741	-	95	39.674	ENSATEG00000017383	aptx	98	39.674	Anabas_testudineus
ENSCING00000008741	-	87	38.507	ENSAPLG00000015645	APTX	98	38.507	Anas_platyrhynchos
ENSCING00000008741	-	94	39.276	ENSACAG00000003581	APTX	93	39.276	Anolis_carolinensis
ENSCING00000008741	-	94	40.669	ENSANAG00000030160	APTX	95	40.525	Aotus_nancymaae
ENSCING00000008741	-	95	41.033	ENSACLG00000018887	aptx	98	41.033	Astatotilapia_calliptera
ENSCING00000008741	-	94	40.548	ENSAMXG00000039899	aptx	97	40.548	Astyanax_mexicanus
ENSCING00000008741	-	98	36.997	ENSBTAG00000013947	APTX	96	38.440	Bos_taurus
ENSCING00000008741	-	94	40.496	ENSCJAG00000007940	APTX	97	40.496	Callithrix_jacchus
ENSCING00000008741	-	94	41.047	ENSCAFG00000001812	APTX	97	41.047	Canis_familiaris
ENSCING00000008741	-	94	41.047	ENSCAFG00020015598	APTX	97	41.047	Canis_lupus_dingo
ENSCING00000008741	-	94	38.997	ENSCHIG00000012896	APTX	97	38.997	Capra_hircus
ENSCING00000008741	-	94	39.945	ENSTSYG00000003041	APTX	97	39.945	Carlito_syrichta
ENSCING00000008741	-	94	39.833	ENSCPOG00000005975	APTX	96	48.677	Cavia_porcellus
ENSCING00000008741	-	94	40.496	ENSCCAG00000036783	APTX	97	40.496	Cebus_capucinus
ENSCING00000008741	-	94	40.220	ENSCATG00000042639	APTX	94	40.439	Cercocebus_atys
ENSCING00000008741	-	94	39.833	ENSCLAG00000012185	APTX	96	48.148	Chinchilla_lanigera
ENSCING00000008741	-	94	39.945	ENSCSAG00000009885	APTX	93	39.945	Chlorocebus_sabaeus
ENSCING00000008741	-	94	41.600	ENSCPBG00000023973	APTX	95	43.169	Chrysemys_picta_bellii
ENSCING00000008741	-	96	62.670	ENSCSAVG00000008038	-	98	63.488	Ciona_savignyi
ENSCING00000008741	-	94	39.669	ENSCANG00000037253	APTX	97	39.669	Colobus_angolensis_palliatus
ENSCING00000008741	-	94	38.997	ENSCGRG00001000705	Aptx	96	48.214	Cricetulus_griseus_chok1gshd
ENSCING00000008741	-	94	38.997	ENSCGRG00000014159	Aptx	96	48.214	Cricetulus_griseus_crigri
ENSCING00000008741	-	95	41.551	ENSCSEG00000009549	aptx	98	41.551	Cynoglossus_semilaevis
ENSCING00000008741	-	95	41.576	ENSCVAG00000011942	aptx	98	41.576	Cyprinodon_variegatus
ENSCING00000008741	-	94	39.833	ENSDARG00000027143	aptx	97	40.390	Danio_rerio
ENSCING00000008741	-	94	40.055	ENSDNOG00000018498	APTX	93	40.055	Dasypus_novemcinctus
ENSCING00000008741	-	94	40.390	ENSDORG00000002139	Aptx	96	47.644	Dipodomys_ordii
ENSCING00000008741	-	79	38.538	ENSETEG00000012459	APTX	77	38.816	Echinops_telfairi
ENSCING00000008741	-	98	37.333	ENSEBUG00000013914	aptx	98	37.037	Eptatretus_burgeri
ENSCING00000008741	-	94	40.669	ENSEASG00005004566	APTX	97	40.669	Equus_asinus_asinus
ENSCING00000008741	-	94	40.947	ENSECAG00000012674	APTX	90	40.947	Equus_caballus
ENSCING00000008741	-	82	40.256	ENSEEUG00000010693	APTX	94	40.256	Erinaceus_europaeus
ENSCING00000008741	-	94	40.390	ENSFCAG00000008728	APTX	92	45.673	Felis_catus
ENSCING00000008741	-	94	42.897	ENSFALG00000001230	APTX	97	42.897	Ficedula_albicollis
ENSCING00000008741	-	94	39.945	ENSFDAG00000013752	APTX	96	49.735	Fukomys_damarensis
ENSCING00000008741	-	80	39.432	ENSFHEG00000021328	aptx	72	39.432	Fundulus_heteroclitus
ENSCING00000008741	-	94	41.111	ENSGMOG00000012505	aptx	97	41.111	Gadus_morhua
ENSCING00000008741	-	94	39.394	ENSGALG00000001954	APTX	97	39.945	Gallus_gallus
ENSCING00000008741	-	95	40.934	ENSGAFG00000005086	aptx	98	40.934	Gambusia_affinis
ENSCING00000008741	-	95	39.612	ENSGACG00000017887	aptx	98	39.612	Gasterosteus_aculeatus
ENSCING00000008741	-	94	39.946	ENSGAGG00000013230	APTX	97	41.734	Gopherus_agassizii
ENSCING00000008741	-	86	40.184	ENSGGOG00000014232	APTX	96	38.037	Gorilla_gorilla
ENSCING00000008741	-	95	41.033	ENSHBUG00000021058	aptx	98	41.033	Haplochromis_burtoni
ENSCING00000008741	-	94	39.554	ENSHGLG00000015093	APTX	96	48.214	Heterocephalus_glaber_female
ENSCING00000008741	-	94	39.833	ENSHGLG00100013482	APTX	96	48.214	Heterocephalus_glaber_male
ENSCING00000008741	-	95	38.122	ENSHCOG00000018216	aptx	94	38.122	Hippocampus_comes
ENSCING00000008741	-	94	38.504	ENSIPUG00000017548	aptx	97	38.504	Ictalurus_punctatus
ENSCING00000008741	-	94	40.390	ENSSTOG00000005185	APTX	96	48.677	Ictidomys_tridecemlineatus
ENSCING00000008741	-	94	39.554	ENSJJAG00000015653	Aptx	97	39.554	Jaculus_jaculus
ENSCING00000008741	-	95	39.566	ENSKMAG00000000117	aptx	98	39.566	Kryptolebias_marmoratus
ENSCING00000008741	-	95	41.047	ENSLBEG00000015353	aptx	98	41.047	Labrus_bergylta
ENSCING00000008741	-	95	37.190	ENSLBEG00000021489	APTX	98	37.190	Labrus_bergylta
ENSCING00000008741	-	91	41.954	ENSLACG00000003376	APTX	94	42.241	Latimeria_chalumnae
ENSCING00000008741	-	95	37.705	ENSLOCG00000011556	aptx	94	37.705	Lepisosteus_oculatus
ENSCING00000008741	-	94	40.111	ENSLAFG00000005665	APTX	97	40.111	Loxodonta_africana
ENSCING00000008741	-	94	40.220	ENSMFAG00000043141	APTX	94	40.439	Macaca_fascicularis
ENSCING00000008741	-	94	40.220	ENSMMUG00000007724	APTX	94	40.439	Macaca_mulatta
ENSCING00000008741	-	94	40.220	ENSMNEG00000042341	APTX	97	40.220	Macaca_nemestrina
ENSCING00000008741	-	94	40.220	ENSMLEG00000035137	APTX	97	40.220	Mandrillus_leucophaeus
ENSCING00000008741	-	95	39.402	ENSMAMG00000018377	aptx	98	39.402	Mastacembelus_armatus
ENSCING00000008741	-	95	40.872	ENSMZEG00005022621	aptx	98	40.872	Maylandia_zebra
ENSCING00000008741	-	94	37.883	ENSMAUG00000006039	Aptx	96	46.429	Mesocricetus_auratus
ENSCING00000008741	-	94	40.220	ENSMICG00000006603	APTX	95	40.220	Microcebus_murinus
ENSCING00000008741	-	94	39.833	ENSMOCG00000000869	Aptx	96	50.000	Microtus_ochrogaster
ENSCING00000008741	-	95	40.443	ENSMMOG00000007028	aptx	98	40.443	Mola_mola
ENSCING00000008741	-	94	39.335	ENSMODG00000003365	APTX	97	39.335	Monodelphis_domestica
ENSCING00000008741	-	95	35.180	ENSMALG00000003828	aptx	98	35.180	Monopterus_albus
ENSCING00000008741	-	63	48.214	MGP_CAROLIEiJ_G0025897	-	96	48.214	Mus_caroli
ENSCING00000008741	-	94	39.669	ENSMUSG00000028411	Aptx	96	48.214	Mus_musculus
ENSCING00000008741	-	96	38.525	MGP_PahariEiJ_G0024020	Aptx	98	38.525	Mus_pahari
ENSCING00000008741	-	94	39.669	MGP_SPRETEiJ_G0026846	Aptx	94	39.669	Mus_spretus
ENSCING00000008741	-	94	38.997	ENSMPUG00000004290	APTX	97	38.997	Mustela_putorius_furo
ENSCING00000008741	-	94	40.390	ENSMLUG00000016081	APTX	92	40.390	Myotis_lucifugus
ENSCING00000008741	-	94	40.111	ENSNGAG00000016314	Aptx	96	48.677	Nannospalax_galili
ENSCING00000008741	-	95	40.217	ENSNBRG00000014199	aptx	98	40.217	Neolamprologus_brichardi
ENSCING00000008741	-	94	41.047	ENSNLEG00000032184	APTX	97	41.047	Nomascus_leucogenys
ENSCING00000008741	-	95	36.915	ENSMEUG00000004153	APTX	98	36.915	Notamacropus_eugenii
ENSCING00000008741	-	82	39.365	ENSOPRG00000012403	APTX	94	39.365	Ochotona_princeps
ENSCING00000008741	-	66	47.179	ENSODEG00000000097	-	93	47.030	Octodon_degus
ENSCING00000008741	-	94	39.612	ENSODEG00000015832	-	96	48.214	Octodon_degus
ENSCING00000008741	-	95	41.304	ENSONIG00000014541	aptx	82	41.304	Oreochromis_niloticus
ENSCING00000008741	-	83	40.000	ENSOANG00000009878	APTX	97	40.000	Ornithorhynchus_anatinus
ENSCING00000008741	-	75	48.969	ENSOCUG00000025059	-	89	48.969	Oryctolagus_cuniculus
ENSCING00000008741	-	94	41.274	ENSOCUG00000000738	-	97	42.222	Oryctolagus_cuniculus
ENSCING00000008741	-	94	39.669	ENSORLG00000006237	aptx	97	39.669	Oryzias_latipes
ENSCING00000008741	-	94	39.669	ENSORLG00020021478	aptx	97	39.669	Oryzias_latipes_hni
ENSCING00000008741	-	94	39.560	ENSORLG00015021873	aptx	97	39.560	Oryzias_latipes_hsok
ENSCING00000008741	-	84	38.941	ENSOMEG00000007875	aptx	79	38.941	Oryzias_melastigma
ENSCING00000008741	-	94	40.771	ENSOGAG00000005388	APTX	93	40.771	Otolemur_garnettii
ENSCING00000008741	-	94	38.440	ENSOARG00000009598	APTX	93	38.440	Ovis_aries
ENSCING00000008741	-	94	40.771	ENSPPAG00000030295	APTX	97	40.060	Pan_paniscus
ENSCING00000008741	-	94	40.390	ENSPPRG00000017524	APTX	92	45.673	Panthera_pardus
ENSCING00000008741	-	94	40.390	ENSPTIG00000020000	APTX	92	45.673	Panthera_tigris_altaica
ENSCING00000008741	-	98	37.634	ENSPTRG00000020850	APTX	97	40.771	Pan_troglodytes
ENSCING00000008741	-	94	40.220	ENSPANG00000025301	APTX	94	40.439	Papio_anubis
ENSCING00000008741	-	95	38.356	ENSPKIG00000013601	aptx	98	38.356	Paramormyrops_kingsleyae
ENSCING00000008741	-	94	40.970	ENSPSIG00000010521	APTX	93	40.970	Pelodiscus_sinensis
ENSCING00000008741	-	95	37.500	ENSPMGG00000018649	aptx	98	37.500	Periophthalmus_magnuspinnatus
ENSCING00000008741	-	94	38.997	ENSPEMG00000007747	Aptx	96	50.000	Peromyscus_maniculatus_bairdii
ENSCING00000008741	-	95	35.440	ENSPMAG00000008417	aptx	96	35.440	Petromyzon_marinus
ENSCING00000008741	-	95	39.730	ENSPCIG00000029852	APTX	98	39.730	Phascolarctos_cinereus
ENSCING00000008741	-	95	39.835	ENSPFOG00000005131	-	98	39.835	Poecilia_formosa
ENSCING00000008741	-	95	39.835	ENSPFOG00000004992	aptx	98	39.835	Poecilia_formosa
ENSCING00000008741	-	95	39.835	ENSPLAG00000007960	APTX	98	39.835	Poecilia_latipinna
ENSCING00000008741	-	95	39.835	ENSPLAG00000007906	aptx	98	39.835	Poecilia_latipinna
ENSCING00000008741	-	95	39.835	ENSPMEG00000019789	APTX	98	39.835	Poecilia_mexicana
ENSCING00000008741	-	95	39.835	ENSPMEG00000018504	aptx	98	39.835	Poecilia_mexicana
ENSCING00000008741	-	95	36.538	ENSPREG00000004375	aptx	98	36.538	Poecilia_reticulata
ENSCING00000008741	-	94	40.771	ENSPPYG00000019142	APTX	93	40.771	Pongo_abelii
ENSCING00000008741	-	94	32.312	ENSPCAG00000010014	APTX	97	32.312	Procavia_capensis
ENSCING00000008741	-	94	41.322	ENSPCOG00000016780	APTX	97	41.322	Propithecus_coquereli
ENSCING00000008741	-	94	40.111	ENSPVAG00000011468	APTX	94	40.111	Pteropus_vampyrus
ENSCING00000008741	-	95	41.033	ENSPNYG00000007675	aptx	98	41.033	Pundamilia_nyererei
ENSCING00000008741	-	94	42.897	ENSPNAG00000015984	aptx	97	42.897	Pygocentrus_nattereri
ENSCING00000008741	-	94	37.604	ENSRNOG00000006582	Aptx	97	37.604	Rattus_norvegicus
ENSCING00000008741	-	94	40.771	ENSRBIG00000042913	APTX	97	40.771	Rhinopithecus_bieti
ENSCING00000008741	-	94	40.496	ENSRROG00000035395	APTX	97	40.496	Rhinopithecus_roxellana
ENSCING00000008741	-	94	40.496	ENSSBOG00000025215	APTX	97	40.496	Saimiri_boliviensis_boliviensis
ENSCING00000008741	-	98	39.410	ENSSHAG00000012205	APTX	96	39.410	Sarcophilus_harrisii
ENSCING00000008741	-	95	37.950	ENSSFOG00015009267	aptx	98	37.950	Scleropages_formosus
ENSCING00000008741	-	95	40.000	ENSSMAG00000008839	aptx	98	40.000	Scophthalmus_maximus
ENSCING00000008741	-	95	39.402	ENSSDUG00000001989	aptx	98	39.402	Seriola_dumerili
ENSCING00000008741	-	95	39.674	ENSSLDG00000004915	aptx	98	39.674	Seriola_lalandi_dorsalis
ENSCING00000008741	-	92	41.011	ENSSPUG00000008994	APTX	82	41.011	Sphenodon_punctatus
ENSCING00000008741	-	95	40.166	ENSSPAG00000020373	aptx	98	40.166	Stegastes_partitus
ENSCING00000008741	-	94	40.669	ENSSSCG00000011001	APTX	97	40.669	Sus_scrofa
ENSCING00000008741	-	94	41.160	ENSTGUG00000001441	APTX	97	41.160	Taeniopygia_guttata
ENSCING00000008741	-	95	40.659	ENSTRUG00000009794	aptx	98	40.659	Takifugu_rubripes
ENSCING00000008741	-	95	39.344	ENSTNIG00000010570	aptx	98	39.344	Tetraodon_nigroviridis
ENSCING00000008741	-	94	37.604	ENSTBEG00000008504	APTX	93	37.604	Tupaia_belangeri
ENSCING00000008741	-	90	37.101	ENSTTRG00000007384	APTX	95	37.101	Tursiops_truncatus
ENSCING00000008741	-	94	40.390	ENSUAMG00000003700	APTX	95	40.390	Ursus_americanus
ENSCING00000008741	-	94	40.390	ENSUMAG00000005837	APTX	97	40.390	Ursus_maritimus
ENSCING00000008741	-	55	39.904	ENSVPAG00000001297	APTX	60	39.904	Vicugna_pacos
ENSCING00000008741	-	94	41.047	ENSVVUG00000021130	APTX	97	41.047	Vulpes_vulpes
ENSCING00000008741	-	95	39.835	ENSXETG00000024143	aptx	98	41.436	Xenopus_tropicalis
ENSCING00000008741	-	95	40.489	ENSXCOG00000005020	aptx	98	40.489	Xiphophorus_couchianus
ENSCING00000008741	-	95	40.659	ENSXMAG00000022086	aptx	94	40.659	Xiphophorus_maculatus