EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008750 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box ATP-dependent RNA helicase 20-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5783 bases
Position: chr7:4610504-4616286
Accession: 104265829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000017838	DEAD	PF00270.29	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000017838	-	1877	XM_009860722	ENSCINP00000017838	573 (aa)	XP_009859024	F6T0K4

Gene Model

Click here to download ENSCING00000008750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008750	-	82	45.781	ENSG00000100201	DDX17	63	71.429	Homo_sapiens
ENSCING00000008750	-	75	49.184	ENSAPOG00000017303	si:dkey-156n14.5	65	49.184	Acanthochromis_polyacanthus
ENSCING00000008750	-	82	45.781	ENSAMEG00000010601	DDX17	63	45.781	Ailuropoda_melanoleuca
ENSCING00000008750	-	75	48.951	ENSAOCG00000004874	si:dkey-156n14.5	65	48.951	Amphiprion_ocellaris
ENSCING00000008750	-	75	48.951	ENSAPEG00000018317	si:dkey-156n14.5	65	48.951	Amphiprion_percula
ENSCING00000008750	-	75	48.951	ENSATEG00000021733	si:dkey-156n14.5	68	48.951	Anabas_testudineus
ENSCING00000008750	-	76	48.055	ENSAPLG00000014334	-	72	48.055	Anas_platyrhynchos
ENSCING00000008750	-	79	45.852	ENSANAG00000035052	DDX17	71	45.852	Aotus_nancymaae
ENSCING00000008750	-	76	48.853	ENSACLG00000015882	DDX17	73	47.146	Astatotilapia_calliptera
ENSCING00000008750	-	75	49.184	ENSACLG00000015887	si:dkey-156n14.5	65	49.184	Astatotilapia_calliptera
ENSCING00000008750	-	76	48.284	ENSBTAG00000009887	DDX17	86	49.185	Bos_taurus
ENSCING00000008750	-	75	47.786	WBGene00010260	ddx-17	87	44.356	Caenorhabditis_elegans
ENSCING00000008750	-	82	45.781	ENSCJAG00000011797	DDX17	85	49.185	Callithrix_jacchus
ENSCING00000008750	-	82	45.781	ENSCAFG00000001395	DDX17	66	48.284	Canis_familiaris
ENSCING00000008750	-	82	43.249	ENSCAFG00020002867	DDX17	86	49.185	Canis_lupus_dingo
ENSCING00000008750	-	76	48.284	ENSCHIG00000021332	DDX17	86	49.185	Capra_hircus
ENSCING00000008750	-	82	45.781	ENSTSYG00000001303	DDX17	89	49.185	Carlito_syrichta
ENSCING00000008750	-	76	48.284	ENSCPOG00000011790	DDX17	86	49.185	Cavia_porcellus
ENSCING00000008750	-	82	45.781	ENSCCAG00000024116	DDX17	88	49.185	Cebus_capucinus
ENSCING00000008750	-	82	45.781	ENSCATG00000035701	DDX17	86	49.185	Cercocebus_atys
ENSCING00000008750	-	82	45.781	ENSCLAG00000017294	DDX17	86	49.185	Chinchilla_lanigera
ENSCING00000008750	-	76	48.284	ENSCSAG00000006649	DDX17	66	48.284	Chlorocebus_sabaeus
ENSCING00000008750	-	76	48.165	ENSCHOG00000001931	DDX17	59	48.165	Choloepus_hoffmanni
ENSCING00000008750	-	75	51.508	ENSCING00000004147	-	74	51.508	Ciona_intestinalis
ENSCING00000008750	-	82	45.781	ENSCANG00000002348	DDX17	86	49.185	Colobus_angolensis_palliatus
ENSCING00000008750	-	82	45.781	ENSCGRG00001023050	Ddx17	71	45.781	Cricetulus_griseus_chok1gshd
ENSCING00000008750	-	82	45.781	ENSCGRG00000007756	Ddx17	71	45.781	Cricetulus_griseus_crigri
ENSCING00000008750	-	64	49.591	ENSCSEG00000011351	si:dkey-156n14.5	87	49.591	Cynoglossus_semilaevis
ENSCING00000008750	-	75	49.650	ENSCVAG00000010921	si:dkey-156n14.5	65	49.650	Cyprinodon_variegatus
ENSCING00000008750	-	76	48.394	ENSDARG00000010873	DDX17	87	49.591	Danio_rerio
ENSCING00000008750	-	76	48.284	ENSDNOG00000006499	DDX17	59	48.284	Dasypus_novemcinctus
ENSCING00000008750	-	82	45.781	ENSDORG00000003358	Ddx17	71	45.781	Dipodomys_ordii
ENSCING00000008750	-	75	48.252	FBgn0035720	CG10077	75	48.333	Drosophila_melanogaster
ENSCING00000008750	-	76	48.284	ENSEASG00005018767	DDX17	66	48.284	Equus_asinus_asinus
ENSCING00000008750	-	76	48.284	ENSECAG00000025110	DDX17	86	49.185	Equus_caballus
ENSCING00000008750	-	82	45.781	ENSFCAG00000031570	DDX17	86	49.185	Felis_catus
ENSCING00000008750	-	76	48.055	ENSFALG00000012560	DDX17	58	48.055	Ficedula_albicollis
ENSCING00000008750	-	82	45.781	ENSFDAG00000009967	DDX17	73	45.781	Fukomys_damarensis
ENSCING00000008750	-	76	48.055	ENSGALG00000037360	DDX17	65	48.055	Gallus_gallus
ENSCING00000008750	-	74	42.166	ENSGACG00000019151	si:dkey-156n14.5	66	42.166	Gasterosteus_aculeatus
ENSCING00000008750	-	82	45.781	ENSGGOG00000008309	DDX17	86	49.185	Gorilla_gorilla
ENSCING00000008750	-	76	48.853	ENSHBUG00000022268	DDX17	73	47.146	Haplochromis_burtoni
ENSCING00000008750	-	75	48.951	ENSHBUG00000021303	si:dkey-156n14.5	65	48.951	Haplochromis_burtoni
ENSCING00000008750	-	76	48.284	ENSHGLG00000012568	DDX17	59	48.284	Heterocephalus_glaber_female
ENSCING00000008750	-	76	48.284	ENSHGLG00100011291	DDX17	86	49.185	Heterocephalus_glaber_male
ENSCING00000008750	-	76	48.853	ENSIPUG00000015768	si:dkey-156n14.5	90	50.136	Ictalurus_punctatus
ENSCING00000008750	-	76	48.284	ENSSTOG00000013699	DDX17	59	48.284	Ictidomys_tridecemlineatus
ENSCING00000008750	-	76	48.284	ENSJJAG00000011350	Ddx17	59	48.284	Jaculus_jaculus
ENSCING00000008750	-	82	45.781	ENSMFAG00000046051	DDX17	86	49.185	Macaca_fascicularis
ENSCING00000008750	-	76	48.284	ENSMMUG00000004304	DDX17	86	49.185	Macaca_mulatta
ENSCING00000008750	-	82	45.781	ENSMNEG00000022218	DDX17	86	49.185	Macaca_nemestrina
ENSCING00000008750	-	82	45.781	ENSMLEG00000029141	DDX17	86	49.185	Mandrillus_leucophaeus
ENSCING00000008750	-	70	49.752	ENSMAMG00000008427	si:dkey-156n14.5	62	49.752	Mastacembelus_armatus
ENSCING00000008750	-	75	49.184	ENSMZEG00005009937	si:dkey-156n14.5	65	49.184	Maylandia_zebra
ENSCING00000008750	-	76	48.055	ENSMGAG00000012423	DDX17	84	49.425	Meleagris_gallopavo
ENSCING00000008750	-	61	45.115	ENSMAUG00000020476	Ddx17	82	45.115	Mesocricetus_auratus
ENSCING00000008750	-	82	45.781	ENSMICG00000011601	DDX17	86	49.185	Microcebus_murinus
ENSCING00000008750	-	76	46.591	ENSMOCG00000010769	Ddx17	59	46.591	Microtus_ochrogaster
ENSCING00000008750	-	64	49.596	ENSMMOG00000007416	si:dkey-156n14.5	84	49.596	Mola_mola
ENSCING00000008750	-	64	49.322	ENSMMOG00000002806	-	96	46.883	Mola_mola
ENSCING00000008750	-	76	48.513	ENSMODG00000009681	DDX17	69	48.513	Monodelphis_domestica
ENSCING00000008750	-	75	49.654	ENSMALG00000002485	si:dkey-156n14.5	66	49.654	Monopterus_albus
ENSCING00000008750	-	82	45.781	MGP_CAROLIEiJ_G0020017	Ddx17	71	45.781	Mus_caroli
ENSCING00000008750	-	82	45.781	ENSMUSG00000055065	Ddx17	89	48.919	Mus_musculus
ENSCING00000008750	-	82	45.781	MGP_PahariEiJ_G0020019	Ddx17	71	45.781	Mus_pahari
ENSCING00000008750	-	82	45.781	MGP_SPRETEiJ_G0020915	Ddx17	71	45.781	Mus_spretus
ENSCING00000008750	-	76	48.284	ENSMPUG00000013125	DDX17	66	48.284	Mustela_putorius_furo
ENSCING00000008750	-	76	48.284	ENSMLUG00000013151	DDX17	67	48.284	Myotis_lucifugus
ENSCING00000008750	-	82	45.781	ENSNGAG00000004001	Ddx17	71	45.781	Nannospalax_galili
ENSCING00000008750	-	63	50.138	ENSNBRG00000020059	-	84	50.138	Neolamprologus_brichardi
ENSCING00000008750	-	65	49.194	ENSNBRG00000002592	DDX17	83	49.194	Neolamprologus_brichardi
ENSCING00000008750	-	82	45.781	ENSNLEG00000015117	DDX17	86	49.185	Nomascus_leucogenys
ENSCING00000008750	-	64	49.457	ENSMEUG00000009627	DDX17	57	49.457	Notamacropus_eugenii
ENSCING00000008750	-	76	48.284	ENSOPRG00000014734	DDX17	59	48.284	Ochotona_princeps
ENSCING00000008750	-	76	44.743	ENSODEG00000013118	DDX17	59	44.743	Octodon_degus
ENSCING00000008750	-	75	49.070	ENSONIG00000018880	si:dkey-156n14.5	85	50.556	Oreochromis_niloticus
ENSCING00000008750	-	76	48.284	ENSOCUG00000004982	DDX17	66	48.284	Oryctolagus_cuniculus
ENSCING00000008750	-	75	48.951	ENSORLG00000013685	si:dkey-156n14.5	65	48.951	Oryzias_latipes
ENSCING00000008750	-	75	48.951	ENSORLG00020021743	si:dkey-156n14.5	65	48.951	Oryzias_latipes_hni
ENSCING00000008750	-	74	49.296	ENSORLG00015022548	si:dkey-156n14.5	65	49.296	Oryzias_latipes_hsok
ENSCING00000008750	-	75	49.184	ENSOMEG00000009515	si:dkey-156n14.5	67	49.184	Oryzias_melastigma
ENSCING00000008750	-	82	45.781	ENSOGAG00000001539	DDX17	71	45.781	Otolemur_garnettii
ENSCING00000008750	-	76	48.284	ENSOARG00000015489	DDX17	68	48.284	Ovis_aries
ENSCING00000008750	-	82	45.781	ENSPPAG00000042301	DDX17	86	49.185	Pan_paniscus
ENSCING00000008750	-	82	45.781	ENSPPRG00000008444	DDX17	62	45.781	Panthera_pardus
ENSCING00000008750	-	82	45.781	ENSPTIG00000008733	DDX17	87	49.185	Panthera_tigris_altaica
ENSCING00000008750	-	82	45.781	ENSPTRG00000014369	DDX17	86	49.185	Pan_troglodytes
ENSCING00000008750	-	82	45.781	ENSPANG00000015143	DDX17	86	49.185	Papio_anubis
ENSCING00000008750	-	76	48.624	ENSPKIG00000002575	si:dkey-156n14.5	63	48.624	Paramormyrops_kingsleyae
ENSCING00000008750	-	76	49.083	ENSPKIG00000007831	DDX17	69	47.335	Paramormyrops_kingsleyae
ENSCING00000008750	-	82	45.781	ENSPEMG00000021115	Ddx17	71	45.781	Peromyscus_maniculatus_bairdii
ENSCING00000008750	-	76	48.513	ENSPCIG00000001652	DDX17	66	48.513	Phascolarctos_cinereus
ENSCING00000008750	-	75	48.951	ENSPREG00000000506	si:dkey-156n14.5	65	48.951	Poecilia_reticulata
ENSCING00000008750	-	76	48.284	ENSPPYG00000011821	DDX17	66	48.284	Pongo_abelii
ENSCING00000008750	-	76	48.284	ENSPCAG00000011672	DDX17	59	48.284	Procavia_capensis
ENSCING00000008750	-	82	45.781	ENSPCOG00000014360	DDX17	86	49.185	Propithecus_coquereli
ENSCING00000008750	-	76	48.284	ENSPVAG00000010133	DDX17	59	48.284	Pteropus_vampyrus
ENSCING00000008750	-	76	48.624	ENSPNYG00000019669	-	73	46.934	Pundamilia_nyererei
ENSCING00000008750	-	75	48.951	ENSPNYG00000005694	si:dkey-156n14.5	65	48.951	Pundamilia_nyererei
ENSCING00000008750	-	76	48.165	ENSPNAG00000029948	si:dkey-156n14.5	87	49.319	Pygocentrus_nattereri
ENSCING00000008750	-	82	45.781	ENSRNOG00000051170	Ddx17	71	45.781	Rattus_norvegicus
ENSCING00000008750	-	82	45.781	ENSRBIG00000031437	DDX17	83	47.851	Rhinopithecus_bieti
ENSCING00000008750	-	82	45.781	ENSRROG00000045378	DDX17	86	49.185	Rhinopithecus_roxellana
ENSCING00000008750	-	75	49.299	YNL112W	-	77	49.533	Saccharomyces_cerevisiae
ENSCING00000008750	-	82	40.717	ENSSBOG00000024547	DDX17	61	40.717	Saimiri_boliviensis_boliviensis
ENSCING00000008750	-	76	48.630	ENSSHAG00000004578	DDX17	68	48.630	Sarcophilus_harrisii
ENSCING00000008750	-	76	49.312	ENSSFOG00015012308	ddx17	68	47.335	Scleropages_formosus
ENSCING00000008750	-	75	48.951	ENSSMAG00000007794	si:dkey-156n14.5	64	48.951	Scophthalmus_maximus
ENSCING00000008750	-	76	49.545	ENSSMAG00000005509	DDX17	66	49.545	Scophthalmus_maximus
ENSCING00000008750	-	75	49.184	ENSSPAG00000017130	si:dkey-156n14.5	65	49.184	Stegastes_partitus
ENSCING00000008750	-	64	49.864	ENSSPAG00000019808	-	88	49.864	Stegastes_partitus
ENSCING00000008750	-	76	48.284	ENSSSCG00000000104	DDX17	86	49.185	Sus_scrofa
ENSCING00000008750	-	76	48.055	ENSTGUG00000010391	DDX17	66	48.055	Taeniopygia_guttata
ENSCING00000008750	-	75	48.718	ENSTRUG00000021931	si:dkey-156n14.5	66	48.718	Takifugu_rubripes
ENSCING00000008750	-	76	47.140	ENSTTRG00000005623	DDX17	68	47.140	Tursiops_truncatus
ENSCING00000008750	-	82	45.781	ENSUAMG00000007290	DDX17	87	48.284	Ursus_americanus
ENSCING00000008750	-	72	48.786	ENSVPAG00000001476	DDX17	55	48.786	Vicugna_pacos
ENSCING00000008750	-	64	49.185	ENSVVUG00000022762	DDX17	86	49.185	Vulpes_vulpes
ENSCING00000008750	-	76	47.706	ENSXETG00000006900	ddx17	70	47.706	Xenopus_tropicalis
ENSCING00000008750	-	75	48.951	ENSXMAG00000005078	si:dkey-156n14.5	65	48.951	Xiphophorus_maculatus