EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008831 (Gene tree)
Gene ID: 100187445
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX49
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2824 bases
Position: chr4:4688155-4690978
Accession: 100187445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000024709	ResIII	PF04851.15	3.6e-07	1	1
ENSCINP00000024709	DEAD	PF00270.29	2.8e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024955	-	1448	-	ENSCINP00000024709	457 (aa)	XP_002129152	F6SDQ3

Gene Model

Click here to download ENSCING00000008831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008831	-	99	60.088	ENSG00000105671	DDX49	94	60.088	Homo_sapiens
ENSCING00000008831	-	94	62.791	ENSAPOG00000010961	ddx49	93	61.726	Acanthochromis_polyacanthus
ENSCING00000008831	-	99	59.956	ENSAMEG00000011566	DDX49	93	59.956	Ailuropoda_melanoleuca
ENSCING00000008831	-	94	63.256	ENSACIG00000011029	ddx49	93	61.384	Amphilophus_citrinellus
ENSCING00000008831	-	94	62.791	ENSAOCG00000006257	ddx49	93	60.938	Amphiprion_ocellaris
ENSCING00000008831	-	98	60.938	ENSAPEG00000006367	ddx49	93	60.938	Amphiprion_percula
ENSCING00000008831	-	98	60.491	ENSATEG00000016661	ddx49	93	60.491	Anabas_testudineus
ENSCING00000008831	-	81	60.976	ENSAPLG00000008420	DDX49	92	59.335	Anas_platyrhynchos
ENSCING00000008831	-	98	59.560	ENSANAG00000031415	DDX49	94	59.560	Aotus_nancymaae
ENSCING00000008831	-	94	62.326	ENSACLG00000022538	ddx49	99	62.470	Astatotilapia_calliptera
ENSCING00000008831	-	98	61.435	ENSAMXG00000016919	ddx49	96	60.526	Astyanax_mexicanus
ENSCING00000008831	-	99	59.211	ENSBTAG00000000811	DDX49	93	65.421	Bos_taurus
ENSCING00000008831	-	98	49.667	WBGene00019219	H20J04.4	79	49.667	Caenorhabditis_elegans
ENSCING00000008831	-	98	59.560	ENSCJAG00000042114	DDX49	94	59.560	Callithrix_jacchus
ENSCING00000008831	-	99	59.430	ENSCAFG00000014512	DDX49	93	59.430	Canis_familiaris
ENSCING00000008831	-	99	59.430	ENSCAFG00020012375	DDX49	71	59.430	Canis_lupus_dingo
ENSCING00000008831	-	99	58.991	ENSCHIG00000019910	DDX49	94	58.991	Capra_hircus
ENSCING00000008831	-	98	60.444	ENSTSYG00000028117	DDX49	94	60.444	Carlito_syrichta
ENSCING00000008831	-	96	58.652	ENSCAPG00000012222	DDX49	95	58.652	Cavia_aperea
ENSCING00000008831	-	98	60.220	ENSCPOG00000013626	DDX49	95	60.220	Cavia_porcellus
ENSCING00000008831	-	98	59.341	ENSCCAG00000036092	DDX49	94	59.341	Cebus_capucinus
ENSCING00000008831	-	98	60.220	ENSCATG00000032577	DDX49	94	60.220	Cercocebus_atys
ENSCING00000008831	-	98	59.341	ENSCLAG00000012844	DDX49	96	59.341	Chinchilla_lanigera
ENSCING00000008831	-	98	57.582	ENSCSAG00000005251	DDX49	94	57.582	Chlorocebus_sabaeus
ENSCING00000008831	-	98	62.054	ENSCPBG00000012500	DDX49	93	62.054	Chrysemys_picta_bellii
ENSCING00000008831	-	93	87.765	ENSCSAVG00000000522	-	100	87.765	Ciona_savignyi
ENSCING00000008831	-	98	56.484	ENSCANG00000030901	DDX49	94	56.484	Colobus_angolensis_palliatus
ENSCING00000008831	-	99	60.486	ENSCGRG00001009467	Ddx49	93	60.486	Cricetulus_griseus_chok1gshd
ENSCING00000008831	-	99	60.486	ENSCGRG00000011487	Ddx49	93	60.486	Cricetulus_griseus_crigri
ENSCING00000008831	-	99	60.486	ENSCSEG00000016139	ddx49	93	60.486	Cynoglossus_semilaevis
ENSCING00000008831	-	99	57.173	ENSCVAG00000010466	ddx49	94	59.598	Cyprinodon_variegatus
ENSCING00000008831	-	94	60.000	ENSDARG00000012899	ddx49	97	58.242	Danio_rerio
ENSCING00000008831	-	87	61.869	ENSDORG00000004301	Ddx49	87	61.869	Dipodomys_ordii
ENSCING00000008831	-	96	47.875	FBgn0010220	Dbp45A	85	47.875	Drosophila_melanogaster
ENSCING00000008831	-	99	59.649	ENSEASG00005006560	DDX49	94	59.649	Equus_asinus_asinus
ENSCING00000008831	-	99	59.565	ENSECAG00000012194	DDX49	93	65.049	Equus_caballus
ENSCING00000008831	-	98	62.198	ENSELUG00000012963	ddx49	95	62.198	Esox_lucius
ENSCING00000008831	-	99	59.956	ENSFCAG00000009760	DDX49	93	59.956	Felis_catus
ENSCING00000008831	-	98	59.780	ENSFDAG00000011064	DDX49	96	59.780	Fukomys_damarensis
ENSCING00000008831	-	94	61.860	ENSGMOG00000007556	ddx49	95	60.491	Gadus_morhua
ENSCING00000008831	-	99	61.062	ENSGALG00000003130	DDX49	99	63.317	Gallus_gallus
ENSCING00000008831	-	94	61.305	ENSGAFG00000004779	ddx49	94	59.508	Gambusia_affinis
ENSCING00000008831	-	94	63.023	ENSGACG00000008047	ddx49	98	62.736	Gasterosteus_aculeatus
ENSCING00000008831	-	98	60.045	ENSGAGG00000022213	DDX49	93	60.045	Gopherus_agassizii
ENSCING00000008831	-	99	59.868	ENSGGOG00000037966	DDX49	94	59.868	Gorilla_gorilla
ENSCING00000008831	-	94	62.326	ENSHBUG00000008991	ddx49	93	60.491	Haplochromis_burtoni
ENSCING00000008831	-	98	60.045	ENSHGLG00000006789	DDX49	94	60.045	Heterocephalus_glaber_female
ENSCING00000008831	-	98	58.482	ENSHGLG00100006283	DDX49	94	58.482	Heterocephalus_glaber_male
ENSCING00000008831	-	98	59.821	ENSHCOG00000008961	ddx49	93	59.821	Hippocampus_comes
ENSCING00000008831	-	98	60.268	ENSIPUG00000005386	ddx49	93	60.538	Ictalurus_punctatus
ENSCING00000008831	-	98	60.000	ENSSTOG00000006749	DDX49	93	60.000	Ictidomys_tridecemlineatus
ENSCING00000008831	-	94	61.860	ENSKMAG00000004909	ddx49	93	60.045	Kryptolebias_marmoratus
ENSCING00000008831	-	94	61.860	ENSLBEG00000027804	ddx49	90	61.860	Labrus_bergylta
ENSCING00000008831	-	94	59.674	ENSLACG00000008244	DDX49	93	58.259	Latimeria_chalumnae
ENSCING00000008831	-	96	61.435	ENSLOCG00000002119	ddx49	95	60.613	Lepisosteus_oculatus
ENSCING00000008831	-	98	60.132	ENSLAFG00000002934	DDX49	95	60.132	Loxodonta_africana
ENSCING00000008831	-	98	60.220	ENSMFAG00000044697	DDX49	94	60.220	Macaca_fascicularis
ENSCING00000008831	-	98	60.220	ENSMMUG00000023293	DDX49	94	60.220	Macaca_mulatta
ENSCING00000008831	-	98	60.220	ENSMNEG00000029654	DDX49	94	60.220	Macaca_nemestrina
ENSCING00000008831	-	98	56.484	ENSMLEG00000042550	DDX49	94	56.484	Mandrillus_leucophaeus
ENSCING00000008831	-	98	60.714	ENSMAMG00000006297	ddx49	93	60.714	Mastacembelus_armatus
ENSCING00000008831	-	94	62.326	ENSMZEG00005016366	ddx49	93	60.491	Maylandia_zebra
ENSCING00000008831	-	99	61.099	ENSMGAG00000004605	DDX49	99	62.060	Meleagris_gallopavo
ENSCING00000008831	-	99	60.706	ENSMAUG00000010235	Ddx49	95	60.706	Mesocricetus_auratus
ENSCING00000008831	-	77	63.522	ENSMICG00000003640	DDX49	87	63.522	Microcebus_murinus
ENSCING00000008831	-	99	60.044	ENSMOCG00000018690	Ddx49	94	60.044	Microtus_ochrogaster
ENSCING00000008831	-	94	61.860	ENSMMOG00000007532	ddx49	94	60.177	Mola_mola
ENSCING00000008831	-	99	59.081	ENSMODG00000003745	DDX49	93	59.081	Monodelphis_domestica
ENSCING00000008831	-	98	61.161	ENSMALG00000018053	ddx49	94	61.161	Monopterus_albus
ENSCING00000008831	-	99	59.823	MGP_CAROLIEiJ_G0031139	Ddx49	93	59.823	Mus_caroli
ENSCING00000008831	-	99	59.823	ENSMUSG00000057788	Ddx49	93	59.823	Mus_musculus
ENSCING00000008831	-	99	59.603	MGP_PahariEiJ_G0021604	Ddx49	93	59.603	Mus_pahari
ENSCING00000008831	-	99	59.823	MGP_SPRETEiJ_G0032257	Ddx49	93	59.823	Mus_spretus
ENSCING00000008831	-	99	59.956	ENSMPUG00000015485	DDX49	93	59.956	Mustela_putorius_furo
ENSCING00000008831	-	99	59.211	ENSMLUG00000012159	DDX49	95	59.211	Myotis_lucifugus
ENSCING00000008831	-	98	59.778	ENSNGAG00000019673	Ddx49	93	59.778	Nannospalax_galili
ENSCING00000008831	-	94	62.326	ENSNBRG00000022025	ddx49	93	60.491	Neolamprologus_brichardi
ENSCING00000008831	-	99	59.868	ENSNLEG00000006136	DDX49	94	59.868	Nomascus_leucogenys
ENSCING00000008831	-	98	59.641	ENSMEUG00000011888	DDX49	99	59.641	Notamacropus_eugenii
ENSCING00000008831	-	98	58.222	ENSOPRG00000003824	DDX49	95	58.222	Ochotona_princeps
ENSCING00000008831	-	99	59.607	ENSODEG00000011203	DDX49	94	59.607	Octodon_degus
ENSCING00000008831	-	94	62.326	ENSONIG00000012731	ddx49	93	60.491	Oreochromis_niloticus
ENSCING00000008831	-	94	62.326	ENSORLG00000008509	ddx49	95	60.619	Oryzias_latipes
ENSCING00000008831	-	94	62.326	ENSORLG00020014661	ddx49	95	60.619	Oryzias_latipes_hni
ENSCING00000008831	-	99	60.619	ENSORLG00015010071	ddx49	96	60.619	Oryzias_latipes_hsok
ENSCING00000008831	-	94	61.860	ENSOMEG00000003733	ddx49	97	59.825	Oryzias_melastigma
ENSCING00000008831	-	99	60.526	ENSOGAG00000008259	DDX49	94	60.526	Otolemur_garnettii
ENSCING00000008831	-	99	58.297	ENSOARG00000010119	-	94	58.297	Ovis_aries
ENSCING00000008831	-	99	60.088	ENSPPAG00000035217	DDX49	94	60.088	Pan_paniscus
ENSCING00000008831	-	99	59.956	ENSPPRG00000013274	DDX49	93	59.956	Panthera_pardus
ENSCING00000008831	-	98	59.560	ENSPTIG00000011259	DDX49	92	60.538	Panthera_tigris_altaica
ENSCING00000008831	-	99	60.088	ENSPTRG00000010725	DDX49	94	60.088	Pan_troglodytes
ENSCING00000008831	-	98	60.220	ENSPANG00000003161	DDX49	94	60.220	Papio_anubis
ENSCING00000008831	-	98	62.054	ENSPKIG00000006013	ddx49	92	62.054	Paramormyrops_kingsleyae
ENSCING00000008831	-	90	59.854	ENSPSIG00000008625	DDX49	93	59.854	Pelodiscus_sinensis
ENSCING00000008831	-	87	61.209	ENSPMGG00000017693	ddx49	95	58.685	Periophthalmus_magnuspinnatus
ENSCING00000008831	-	99	60.044	ENSPEMG00000009238	Ddx49	95	60.044	Peromyscus_maniculatus_bairdii
ENSCING00000008831	-	94	62.269	ENSPMAG00000001195	ddx49	99	60.043	Petromyzon_marinus
ENSCING00000008831	-	98	59.375	ENSPCIG00000001050	DDX49	86	59.375	Phascolarctos_cinereus
ENSCING00000008831	-	94	62.093	ENSPFOG00000000870	ddx49	94	60.268	Poecilia_formosa
ENSCING00000008831	-	94	62.326	ENSPLAG00000016185	ddx49	94	60.491	Poecilia_latipinna
ENSCING00000008831	-	94	62.326	ENSPMEG00000016243	ddx49	94	60.491	Poecilia_mexicana
ENSCING00000008831	-	94	61.628	ENSPREG00000011214	ddx49	94	59.821	Poecilia_reticulata
ENSCING00000008831	-	99	60.088	ENSPPYG00000009755	DDX49	94	60.088	Pongo_abelii
ENSCING00000008831	-	98	60.000	ENSPCAG00000002310	DDX49	93	60.000	Procavia_capensis
ENSCING00000008831	-	99	59.170	ENSPCOG00000024973	DDX49	96	59.170	Propithecus_coquereli
ENSCING00000008831	-	98	56.703	ENSPVAG00000015468	DDX49	94	56.703	Pteropus_vampyrus
ENSCING00000008831	-	94	62.558	ENSPNYG00000016672	ddx49	94	60.714	Pundamilia_nyererei
ENSCING00000008831	-	94	62.383	ENSPNAG00000003429	ddx49	99	58.114	Pygocentrus_nattereri
ENSCING00000008831	-	99	60.177	ENSRNOG00000022368	Ddx49	93	60.177	Rattus_norvegicus
ENSCING00000008831	-	98	60.220	ENSRBIG00000030758	DDX49	94	60.220	Rhinopithecus_bieti
ENSCING00000008831	-	98	60.000	ENSRROG00000032460	DDX49	94	60.000	Rhinopithecus_roxellana
ENSCING00000008831	-	91	45.540	YHR169W	-	98	45.540	Saccharomyces_cerevisiae
ENSCING00000008831	-	98	60.000	ENSSBOG00000035812	DDX49	96	60.690	Saimiri_boliviensis_boliviensis
ENSCING00000008831	-	98	59.732	ENSSHAG00000010982	DDX49	87	59.732	Sarcophilus_harrisii
ENSCING00000008831	-	98	60.938	ENSSFOG00015021150	ddx49	93	60.938	Scleropages_formosus
ENSCING00000008831	-	94	62.093	ENSSMAG00000021016	ddx49	94	60.044	Scophthalmus_maximus
ENSCING00000008831	-	94	62.791	ENSSDUG00000009696	ddx49	91	60.938	Seriola_dumerili
ENSCING00000008831	-	94	62.791	ENSSLDG00000006958	ddx49	93	60.938	Seriola_lalandi_dorsalis
ENSCING00000008831	-	62	59.507	ENSSARG00000003669	DDX49	99	59.507	Sorex_araneus
ENSCING00000008831	-	98	60.491	ENSSPUG00000010688	DDX49	93	60.491	Sphenodon_punctatus
ENSCING00000008831	-	94	62.326	ENSSPAG00000011486	ddx49	93	60.491	Stegastes_partitus
ENSCING00000008831	-	99	59.649	ENSSSCG00000025329	DDX49	96	59.649	Sus_scrofa
ENSCING00000008831	-	94	62.326	ENSTRUG00000021524	ddx49	93	60.491	Takifugu_rubripes
ENSCING00000008831	-	94	62.500	ENSTNIG00000010188	ddx49	93	60.667	Tetraodon_nigroviridis
ENSCING00000008831	-	59	69.880	ENSTBEG00000005967	-	56	69.880	Tupaia_belangeri
ENSCING00000008831	-	99	55.263	ENSTTRG00000003818	DDX49	94	55.263	Tursiops_truncatus
ENSCING00000008831	-	99	60.044	ENSUAMG00000007088	DDX49	90	60.044	Ursus_americanus
ENSCING00000008831	-	92	61.995	ENSUMAG00000006489	DDX49	90	61.995	Ursus_maritimus
ENSCING00000008831	-	99	59.735	ENSVVUG00000007767	DDX49	90	59.735	Vulpes_vulpes
ENSCING00000008831	-	94	62.791	ENSXETG00000010135	ddx49	92	61.726	Xenopus_tropicalis
ENSCING00000008831	-	81	58.445	ENSXCOG00000005756	ddx49	90	56.522	Xiphophorus_couchianus
ENSCING00000008831	-	94	62.093	ENSXMAG00000002554	ddx49	94	60.268	Xiphophorus_maculatus