EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000008855 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
9501 bases
Position
chr4:4379390-4388890
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000018021MA3PF02847.174.2e-0911
ENSCINP00000018021MIF4GPF02854.197.6e-5611
ENSCINP00000018021W2PF02020.183.4e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000018021-3647-ENSCINP000000180211037 (aa)-F6R3K6
Gene Model
Click here to download ENSCING00000008855's gene model file
Pathways
Pathway IDPathway NameSource
cin03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008855's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000008855-7345.368ENSG00000110321EIF4G28365.753Homo_sapiens
ENSCING00000008855-6356.055ENSAPOG00000014976eif4g2a7556.055Acanthochromis_polyacanthus
ENSCING00000008855-6357.093ENSAPOG00000016586eif4g2b7657.093Acanthochromis_polyacanthus
ENSCING00000008855-7345.368ENSAMEG00000014576EIF4G27845.368Ailuropoda_melanoleuca
ENSCING00000008855-6357.093ENSACIG00000000178eif4g2a7557.093Amphilophus_citrinellus
ENSCING00000008855-6357.093ENSACIG00000007752eif4g2b7657.093Amphilophus_citrinellus
ENSCING00000008855-6058.943ENSAOCG00000002148eif4g2a7359.438Amphiprion_ocellaris
ENSCING00000008855-6357.093ENSAOCG00000013778eif4g2b7657.093Amphiprion_ocellaris
ENSCING00000008855-6357.093ENSAPEG00000014252eif4g2b7657.093Amphiprion_percula
ENSCING00000008855-6356.597ENSATEG00000006003eif4g2a7856.597Anabas_testudineus
ENSCING00000008855-5458.065ENSATEG00000002419eif4g2b7458.065Anabas_testudineus
ENSCING00000008855-7045.913ENSAPLG00000005642EIF4G27645.913Anas_platyrhynchos
ENSCING00000008855-7047.520ENSACAG00000008398EIF4G27747.520Anolis_carolinensis
ENSCING00000008855-6740.865ENSANAG00000021255-7940.865Aotus_nancymaae
ENSCING00000008855-7345.368ENSANAG00000036301-8645.368Aotus_nancymaae
ENSCING00000008855-6555.709ENSACLG00000000429eif4g2a7355.709Astatotilapia_calliptera
ENSCING00000008855-6357.093ENSACLG00000021001eif4g2b7657.093Astatotilapia_calliptera
ENSCING00000008855-7050.000ENSAMXG00000003883eif4g2b7758.131Astyanax_mexicanus
ENSCING00000008855-6357.093ENSAMXG00000010137eif4g2a7257.093Astyanax_mexicanus
ENSCING00000008855-7345.368ENSBTAG00000020308EIF4G28345.368Bos_taurus
ENSCING00000008855-7345.368ENSCJAG00000010633EIF4G28645.368Callithrix_jacchus
ENSCING00000008855-7345.368ENSCAFG00000007666EIF4G28045.368Canis_familiaris
ENSCING00000008855-7544.018ENSCAFG00020015650EIF4G28545.368Canis_lupus_dingo
ENSCING00000008855-7345.368ENSCHIG00000017894EIF4G28845.368Capra_hircus
ENSCING00000008855-6243.020ENSTSYG00000028832-8542.308Carlito_syrichta
ENSCING00000008855-7345.606ENSTSYG00000000600-8645.606Carlito_syrichta
ENSCING00000008855-7345.368ENSCPOG00000009036EIF4G28645.368Cavia_porcellus
ENSCING00000008855-7345.368ENSCCAG00000020617EIF4G28744.111Cebus_capucinus
ENSCING00000008855-7644.568ENSCATG00000040907EIF4G28645.368Cercocebus_atys
ENSCING00000008855-7345.368ENSCLAG00000016511EIF4G28645.368Chinchilla_lanigera
ENSCING00000008855-7345.368ENSCSAG00000004613EIF4G27645.368Chlorocebus_sabaeus
ENSCING00000008855-6237.530ENSCHOG00000011414EIF4G27037.530Choloepus_hoffmanni
ENSCING00000008855-6057.364ENSCPBG00000005181EIF4G27157.364Chrysemys_picta_bellii
ENSCING00000008855-9664.585ENSCSAVG00000007466-9587.255Ciona_savignyi
ENSCING00000008855-7644.568ENSCANG00000038118EIF4G28645.368Colobus_angolensis_palliatus
ENSCING00000008855-7345.588ENSCGRG00001000464Eif4g28645.588Cricetulus_griseus_chok1gshd
ENSCING00000008855-7345.588ENSCGRG00000010654Eif4g28645.588Cricetulus_griseus_crigri
ENSCING00000008855-6255.636ENSCSEG00000019490eif4g2a7855.636Cynoglossus_semilaevis
ENSCING00000008855-6357.093ENSCSEG00000021334eif4g2b7757.093Cynoglossus_semilaevis
ENSCING00000008855-6356.747ENSCVAG00000008364eif4g2b7656.747Cyprinodon_variegatus
ENSCING00000008855-6251.118ENSCVAG00000018612eif4g2a7751.118Cyprinodon_variegatus
ENSCING00000008855-6449.459ENSDARG00000020377eif4g2a7449.459Danio_rerio
ENSCING00000008855-5957.292ENSDARG00000057167eif4g2b7057.292Danio_rerio
ENSCING00000008855-5840.873ENSDNOG00000002222EIF4G28340.873Dasypus_novemcinctus
ENSCING00000008855-7345.368ENSDORG00000014967Eif4g28645.368Dipodomys_ordii
ENSCING00000008855-6045.392FBgn0010488NAT15645.050Drosophila_melanogaster
ENSCING00000008855-6456.522ENSETEG00000018088EIF4G27255.914Echinops_telfairi
ENSCING00000008855-7345.368ENSEASG00005005881EIF4G28745.368Equus_asinus_asinus
ENSCING00000008855-7345.368ENSECAG00000014700EIF4G28745.368Equus_caballus
ENSCING00000008855-7046.982ENSEEUG00000000375EIF4G28746.982Erinaceus_europaeus
ENSCING00000008855-5556.747ENSELUG00000015787eif4g2a6756.747Esox_lucius
ENSCING00000008855-6355.363ENSELUG00000011497eif4g2b7655.363Esox_lucius
ENSCING00000008855-7345.368ENSFCAG00000022269EIF4G28645.368Felis_catus
ENSCING00000008855-7045.913ENSFALG00000001022EIF4G28045.913Ficedula_albicollis
ENSCING00000008855-7345.368ENSFDAG00000000106EIF4G28645.368Fukomys_damarensis
ENSCING00000008855-6856.747ENSFHEG00000010488eif4g2b8556.747Fundulus_heteroclitus
ENSCING00000008855-7145.989ENSFHEG00000006981eif4g2a8145.989Fundulus_heteroclitus
ENSCING00000008855-7045.913ENSGALG00000005587EIF4G28245.913Gallus_gallus
ENSCING00000008855-6356.747ENSGAFG00000007084eif4g2b7056.747Gambusia_affinis
ENSCING00000008855-6250.938ENSGAFG00000017112eif4g2a7750.938Gambusia_affinis
ENSCING00000008855-5456.401ENSGACG00000009454eif4g2b6256.401Gasterosteus_aculeatus
ENSCING00000008855-5243.689ENSGACG00000015701eif4g2a7643.689Gasterosteus_aculeatus
ENSCING00000008855-7346.154ENSGAGG00000000987EIF4G28446.154Gopherus_agassizii
ENSCING00000008855-7843.158ENSGGOG00000012972EIF4G28645.368Gorilla_gorilla
ENSCING00000008855-6159.231ENSHBUG00000004770eif4g2b7759.231Haplochromis_burtoni
ENSCING00000008855-6356.055ENSHBUG00000018065eif4g2a7756.055Haplochromis_burtoni
ENSCING00000008855-6135.448ENSHGLG00000010266-7135.316Heterocephalus_glaber_female
ENSCING00000008855-7345.368ENSHGLG00000007052-8645.368Heterocephalus_glaber_female
ENSCING00000008855-5840.506ENSHGLG00100001472-6640.506Heterocephalus_glaber_male
ENSCING00000008855-7345.368ENSHGLG00100008407-8345.368Heterocephalus_glaber_male
ENSCING00000008855-5957.093ENSHCOG00000016406eif4g2b7257.093Hippocampus_comes
ENSCING00000008855-6154.545ENSHCOG00000002542eif4g2a7154.545Hippocampus_comes
ENSCING00000008855-5756.944ENSIPUG00000018469eif4g2b6956.944Ictalurus_punctatus
ENSCING00000008855-6152.252ENSIPUG00000010253eif4g2a7552.252Ictalurus_punctatus
ENSCING00000008855-7345.833ENSSTOG00000013612EIF4G28245.833Ictidomys_tridecemlineatus
ENSCING00000008855-7345.024ENSJJAG00000021142-8645.024Jaculus_jaculus
ENSCING00000008855-5956.747ENSKMAG00000006260eif4g2b7256.747Kryptolebias_marmoratus
ENSCING00000008855-5956.655ENSKMAG00000005641eif4g2a7256.655Kryptolebias_marmoratus
ENSCING00000008855-6455.363ENSLBEG00000026992eif4g2a7855.363Labrus_bergylta
ENSCING00000008855-5157.439ENSLBEG00000002302eif4g2b6057.439Labrus_bergylta
ENSCING00000008855-7446.404ENSLACG00000018374EIF4G28146.404Latimeria_chalumnae
ENSCING00000008855-6448.429ENSLOCG00000003911eif4g2a7048.429Lepisosteus_oculatus
ENSCING00000008855-7345.368ENSLAFG00000012814EIF4G28345.368Loxodonta_africana
ENSCING00000008855-7644.568ENSMFAG00000036500EIF4G28645.368Macaca_fascicularis
ENSCING00000008855-7345.368ENSMMUG00000011436EIF4G28645.368Macaca_mulatta
ENSCING00000008855-7644.568ENSMNEG00000038132EIF4G28645.368Macaca_nemestrina
ENSCING00000008855-7644.568ENSMLEG00000037531EIF4G28645.368Mandrillus_leucophaeus
ENSCING00000008855-5557.093ENSMAMG00000022916eif4g2b6657.093Mastacembelus_armatus
ENSCING00000008855-6356.537ENSMAMG00000021721eif4g2a7256.537Mastacembelus_armatus
ENSCING00000008855-6555.709ENSMZEG00005014732eif4g2a7555.709Maylandia_zebra
ENSCING00000008855-6357.093ENSMZEG00005013091eif4g2b7657.093Maylandia_zebra
ENSCING00000008855-7445.913ENSMGAG00000005834EIF4G28645.913Meleagris_gallopavo
ENSCING00000008855-7345.833ENSMAUG00000012197Eif4g28345.833Mesocricetus_auratus
ENSCING00000008855-7345.368ENSMICG00000017460EIF4G28645.368Microcebus_murinus
ENSCING00000008855-7445.833ENSMOCG00000020486Eif4g27945.833Microtus_ochrogaster
ENSCING00000008855-5947.751ENSMMOG00000009007eif4g2b7147.751Mola_mola
ENSCING00000008855-5956.401ENSMMOG00000017008eif4g2a7456.401Mola_mola
ENSCING00000008855-5741.270ENSMODG00000008364EIF4G28241.270Monodelphis_domestica
ENSCING00000008855-6455.017ENSMALG00000020494eif4g2a7555.017Monopterus_albus
ENSCING00000008855-5657.093ENSMALG00000012881eif4g2b6857.093Monopterus_albus
ENSCING00000008855-7345.833ENSMUSG00000005610Eif4g28645.833Mus_musculus
ENSCING00000008855-7345.833MGP_PahariEiJ_G0013542Eif4g28645.833Mus_pahari
ENSCING00000008855-7345.833MGP_SPRETEiJ_G0031445Eif4g28645.833Mus_spretus
ENSCING00000008855-7345.368ENSMPUG00000012886EIF4G27745.368Mustela_putorius_furo
ENSCING00000008855-7345.368ENSMLUG00000016149EIF4G28045.368Myotis_lucifugus
ENSCING00000008855-7345.833ENSNGAG00000024067Eif4g28645.833Nannospalax_galili
ENSCING00000008855-6356.401ENSNBRG00000011756eif4g2a7956.401Neolamprologus_brichardi
ENSCING00000008855-6357.093ENSNBRG00000014520eif4g2b7657.093Neolamprologus_brichardi
ENSCING00000008855-7345.368ENSNLEG00000017628EIF4G28645.368Nomascus_leucogenys
ENSCING00000008855-7041.745ENSOPRG00000006302-8041.745Ochotona_princeps
ENSCING00000008855-6834.104ENSODEG00000001749-8234.104Octodon_degus
ENSCING00000008855-6147.312ENSODEG00000013796-7547.312Octodon_degus
ENSCING00000008855-6357.093ENSONIG00000003851eif4g2b7057.093Oreochromis_niloticus
ENSCING00000008855-6355.172ENSONIG00000006008eif4g2a7055.172Oreochromis_niloticus
ENSCING00000008855-7345.390ENSOCUG00000013326EIF4G28045.390Oryctolagus_cuniculus
ENSCING00000008855-5954.671ENSORLG00000007305eif4g2a7454.671Oryzias_latipes
ENSCING00000008855-5956.401ENSORLG00000018274eif4g2b7556.401Oryzias_latipes
ENSCING00000008855-5946.367ENSORLG00020010776eif4g2a7446.367Oryzias_latipes_hni
ENSCING00000008855-5956.401ENSORLG00015002298eif4g2b7256.401Oryzias_latipes_hsok
ENSCING00000008855-6256.747ENSOMEG00000022918-7256.747Oryzias_melastigma
ENSCING00000008855-7345.368ENSOARG00000010243EIF4G28045.368Ovis_aries
ENSCING00000008855-7843.158ENSPPAG00000028909EIF4G28645.368Pan_paniscus
ENSCING00000008855-7345.368ENSPPRG00000012435EIF4G28645.368Panthera_pardus
ENSCING00000008855-7345.368ENSPTIG00000012255EIF4G28645.368Panthera_tigris_altaica
ENSCING00000008855-7843.158ENSPTRG00000003362EIF4G28645.368Pan_troglodytes
ENSCING00000008855-7644.568ENSPANG00000005223EIF4G28645.368Papio_anubis
ENSCING00000008855-6353.681ENSPKIG00000011136-8253.681Paramormyrops_kingsleyae
ENSCING00000008855-5958.423ENSPKIG00000022719eif4g2b7158.423Paramormyrops_kingsleyae
ENSCING00000008855-7346.154ENSPSIG00000017589EIF4G28546.154Pelodiscus_sinensis
ENSCING00000008855-5956.747ENSPMGG00000019907eif4g2b7456.747Periophthalmus_magnuspinnatus
ENSCING00000008855-7345.833ENSPEMG00000014969Eif4g28645.833Peromyscus_maniculatus_bairdii
ENSCING00000008855-6257.986ENSPMAG00000003048eif4g2a7555.987Petromyzon_marinus
ENSCING00000008855-7345.368ENSPCIG00000024888EIF4G28245.368Phascolarctos_cinereus
ENSCING00000008855-6356.747ENSPFOG00000015554eif4g2b7056.747Poecilia_formosa
ENSCING00000008855-6250.000ENSPFOG00000011759eif4g2a7750.000Poecilia_formosa
ENSCING00000008855-6356.747ENSPLAG00000019338eif4g2b7856.747Poecilia_latipinna
ENSCING00000008855-6250.000ENSPLAG00000019119eif4g2a7550.000Poecilia_latipinna
ENSCING00000008855-6251.250ENSPMEG00000021509eif4g2a7551.250Poecilia_mexicana
ENSCING00000008855-6059.839ENSPREG00000003216eif4g2b7856.747Poecilia_reticulata
ENSCING00000008855-5950.920ENSPREG00000023123eif4g2a7250.920Poecilia_reticulata
ENSCING00000008855-7345.238ENSPPYG00000003485EIF4G28345.238Pongo_abelii
ENSCING00000008855-7345.368ENSPCAG00000014863EIF4G28345.368Procavia_capensis
ENSCING00000008855-7345.368ENSPCOG00000025142-8645.368Propithecus_coquereli
ENSCING00000008855-7345.476ENSPVAG00000016828EIF4G28345.476Pteropus_vampyrus
ENSCING00000008855-6357.093ENSPNYG00000012322eif4g2b7657.093Pundamilia_nyererei
ENSCING00000008855-6555.709ENSPNYG00000009089eif4g2a7355.709Pundamilia_nyererei
ENSCING00000008855-5557.785ENSPNAG00000003194eif4g2a7057.785Pygocentrus_nattereri
ENSCING00000008855-7049.459ENSPNAG00000017735eif4g2b7957.439Pygocentrus_nattereri
ENSCING00000008855-7345.833ENSRNOG00000017158Eif4g28345.833Rattus_norvegicus
ENSCING00000008855-7342.755ENSRBIG00000030029-8642.755Rhinopithecus_bieti
ENSCING00000008855-7644.568ENSRBIG00000028088-8645.368Rhinopithecus_bieti
ENSCING00000008855-7342.993ENSRROG00000034661-8742.993Rhinopithecus_roxellana
ENSCING00000008855-7644.568ENSRROG00000037908-8645.368Rhinopithecus_roxellana
ENSCING00000008855-7345.368ENSSBOG00000026537EIF4G28644.111Saimiri_boliviensis_boliviensis
ENSCING00000008855-7345.368ENSSHAG00000003530EIF4G28045.368Sarcophilus_harrisii
ENSCING00000008855-6949.589ENSSFOG00015004640eif4g2b8249.589Scleropages_formosus
ENSCING00000008855-6350.407ENSSFOG00015013848EIF4G27550.407Scleropages_formosus
ENSCING00000008855-6055.363ENSSMAG00000021426eif4g2a7152.667Scophthalmus_maximus
ENSCING00000008855-5955.034ENSSMAG00000000556eif4g2b7255.034Scophthalmus_maximus
ENSCING00000008855-6357.093ENSSDUG00000004703eif4g2b7657.093Seriola_dumerili
ENSCING00000008855-6747.838ENSSDUG00000023332eif4g2a8047.838Seriola_dumerili
ENSCING00000008855-7147.838ENSSLDG00000021890eif4g2a7247.838Seriola_lalandi_dorsalis
ENSCING00000008855-6357.093ENSSLDG00000023260eif4g2b7657.093Seriola_lalandi_dorsalis
ENSCING00000008855-6843.182ENSSARG00000010737EIF4G27643.182Sorex_araneus
ENSCING00000008855-7245.673ENSSPUG00000013839EIF4G28245.673Sphenodon_punctatus
ENSCING00000008855-6257.093ENSSPAG00000012058eif4g2b7757.093Stegastes_partitus
ENSCING00000008855-6447.213ENSSPAG00000012500eif4g2a7347.213Stegastes_partitus
ENSCING00000008855-5237.457ENSSSCG00000038354-6837.457Sus_scrofa
ENSCING00000008855-7345.368ENSSSCG00000013405-8245.368Sus_scrofa
ENSCING00000008855-7045.913ENSTGUG00000007840EIF4G27845.913Taeniopygia_guttata
ENSCING00000008855-6356.055ENSTRUG00000017454eif4g2a7856.055Takifugu_rubripes
ENSCING00000008855-6455.705ENSTNIG00000013720eif4g2b7455.705Tetraodon_nigroviridis
ENSCING00000008855-7336.580ENSTBEG00000000475EIF4G28136.580Tupaia_belangeri
ENSCING00000008855-5946.667ENSTTRG00000014047EIF4G26546.667Tursiops_truncatus
ENSCING00000008855-7444.884ENSUAMG00000021122EIF4G28545.368Ursus_americanus
ENSCING00000008855-7345.368ENSUMAG00000015347EIF4G28545.368Ursus_maritimus
ENSCING00000008855-7345.606ENSVPAG00000010174EIF4G28345.606Vicugna_pacos
ENSCING00000008855-7345.368ENSVVUG00000025335EIF4G28645.368Vulpes_vulpes
ENSCING00000008855-6648.352ENSXETG00000013674eif4g27548.352Xenopus_tropicalis
ENSCING00000008855-6356.747ENSXCOG00000003655eif4g2b7856.747Xiphophorus_couchianus
ENSCING00000008855-6356.747ENSXMAG00000013534eif4g2b7856.747Xiphophorus_maculatus
ENSCING00000008855-6251.250ENSXMAG00000009265eif4g2a7551.250Xiphophorus_maculatus

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