EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008865 (Gene tree)
Gene ID: 100187293
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6228 bases
Position: chr4:4239331-4245558
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018043	MA3	PF02847.17	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018043	-	2417	-	ENSCINP00000018043	776 (aa)	-	F6R2U8

Gene Model

Click here to download ENSCING00000008865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008865	-	75	66.837	ENSG00000163510	CWC22	78	66.382	Homo_sapiens
ENSCING00000008865	-	72	67.851	ENSAMEG00000011004	CWC22	61	68.223	Ailuropoda_melanoleuca
ENSCING00000008865	-	71	69.384	ENSACIG00000020055	cwc22	62	69.853	Amphilophus_citrinellus
ENSCING00000008865	-	71	68.659	ENSAPEG00000002673	cwc22	58	67.135	Amphiprion_percula
ENSCING00000008865	-	71	68.116	ENSATEG00000005176	cwc22	54	68.934	Anabas_testudineus
ENSCING00000008865	-	71	66.369	ENSACAG00000009438	CWC22	62	66.007	Anolis_carolinensis
ENSCING00000008865	-	72	68.085	ENSANAG00000028324	CWC22	61	68.402	Aotus_nancymaae
ENSCING00000008865	-	71	68.841	ENSACLG00000025447	cwc22	78	69.301	Astatotilapia_calliptera
ENSCING00000008865	-	56	71.946	ENSAMXG00000014957	cwc22	53	72.811	Astyanax_mexicanus
ENSCING00000008865	-	72	67.673	ENSBTAG00000021726	CWC22	62	68.043	Bos_taurus
ENSCING00000008865	-	69	53.148	WBGene00002957	let-858	60	53.061	Caenorhabditis_elegans
ENSCING00000008865	-	72	67.851	ENSCAFG00000014160	CWC22	61	67.207	Canis_familiaris
ENSCING00000008865	-	72	67.851	ENSCAFG00020007223	CWC22	68	67.638	Canis_lupus_dingo
ENSCING00000008865	-	72	67.673	ENSCHIG00000017150	CWC22	62	67.684	Capra_hircus
ENSCING00000008865	-	98	51.480	ENSTSYG00000028686	-	63	61.091	Carlito_syrichta
ENSCING00000008865	-	71	68.829	ENSTSYG00000000218	-	61	69.091	Carlito_syrichta
ENSCING00000008865	-	98	50.065	ENSTSYG00000026635	-	61	60.584	Carlito_syrichta
ENSCING00000008865	-	92	52.005	ENSTSYG00000035591	-	67	61.594	Carlito_syrichta
ENSCING00000008865	-	71	64.568	ENSCAPG00000002064	CWC22	63	64.234	Cavia_aperea
ENSCING00000008865	-	71	68.231	ENSCPOG00000007492	CWC22	61	68.624	Cavia_porcellus
ENSCING00000008865	-	71	64.505	ENSCCAG00000021239	CWC22	60	63.914	Cebus_capucinus
ENSCING00000008865	-	71	68.829	ENSCATG00000035788	CWC22	61	68.223	Cercocebus_atys
ENSCING00000008865	-	71	68.051	ENSCLAG00000011118	CWC22	60	68.624	Chinchilla_lanigera
ENSCING00000008865	-	71	68.829	ENSCSAG00000012925	CWC22	61	68.223	Chlorocebus_sabaeus
ENSCING00000008865	-	72	59.965	ENSCHOG00000006362	CWC22	62	60.144	Choloepus_hoffmanni
ENSCING00000008865	-	90	76.371	ENSCSAVG00000003537	-	97	77.736	Ciona_savignyi
ENSCING00000008865	-	71	68.829	ENSCANG00000013762	CWC22	62	68.223	Colobus_angolensis_palliatus
ENSCING00000008865	-	71	68.100	ENSCGRG00001017005	-	76	68.354	Cricetulus_griseus_chok1gshd
ENSCING00000008865	-	71	68.100	ENSCGRG00000001934	-	61	68.354	Cricetulus_griseus_crigri
ENSCING00000008865	-	71	61.664	ENSCSEG00000005257	cwc22	60	61.835	Cynoglossus_semilaevis
ENSCING00000008865	-	71	68.841	ENSCVAG00000009836	cwc22	54	69.174	Cyprinodon_variegatus
ENSCING00000008865	-	72	66.254	ENSDARG00000014008	cwc22	56	67.204	Danio_rerio
ENSCING00000008865	-	71	53.832	ENSDNOG00000032640	-	76	53.818	Dasypus_novemcinctus
ENSCING00000008865	-	72	68.085	ENSDNOG00000003020	-	61	68.354	Dasypus_novemcinctus
ENSCING00000008865	-	71	68.468	ENSDORG00000011483	-	60	68.727	Dipodomys_ordii
ENSCING00000008865	-	72	57.876	ENSETEG00000013355	CWC22	77	58.244	Echinops_telfairi
ENSCING00000008865	-	71	68.592	ENSEASG00005022287	CWC22	61	68.223	Equus_asinus_asinus
ENSCING00000008865	-	71	68.592	ENSECAG00000010769	CWC22	60	68.909	Equus_caballus
ENSCING00000008865	-	61	67.857	ENSEEUG00000005336	CWC22	53	68.015	Erinaceus_europaeus
ENSCING00000008865	-	99	54.729	ENSELUG00000010536	cwc22	90	62.655	Esox_lucius
ENSCING00000008865	-	72	67.851	ENSFCAG00000018982	CWC22	61	68.223	Felis_catus
ENSCING00000008865	-	71	68.412	ENSFDAG00000010857	CWC22	60	68.566	Fukomys_damarensis
ENSCING00000008865	-	70	68.207	ENSFHEG00000009620	cwc22	57	66.785	Fundulus_heteroclitus
ENSCING00000008865	-	71	65.647	ENSGMOG00000009084	cwc22	88	65.942	Gadus_morhua
ENSCING00000008865	-	70	68.681	ENSGAFG00000021155	cwc22	65	68.566	Gambusia_affinis
ENSCING00000008865	-	71	67.631	ENSGACG00000002071	cwc22	66	68.073	Gasterosteus_aculeatus
ENSCING00000008865	-	72	66.310	ENSGAGG00000013471	CWC22	61	67.091	Gopherus_agassizii
ENSCING00000008865	-	72	68.085	ENSGGOG00000012484	CWC22	61	68.223	Gorilla_gorilla
ENSCING00000008865	-	76	64.636	ENSHBUG00000010504	cwc22	61	69.173	Haplochromis_burtoni
ENSCING00000008865	-	71	68.051	ENSHGLG00000005692	CWC22	62	67.658	Heterocephalus_glaber_female
ENSCING00000008865	-	71	68.051	ENSHGLG00100016497	CWC22	79	67.219	Heterocephalus_glaber_male
ENSCING00000008865	-	70	67.276	ENSHCOG00000004206	cwc22	66	66.306	Hippocampus_comes
ENSCING00000008865	-	71	67.754	ENSIPUG00000005831	cwc22	58	68.199	Ictalurus_punctatus
ENSCING00000008865	-	71	67.806	ENSSTOG00000009788	CWC22	60	68.190	Ictidomys_tridecemlineatus
ENSCING00000008865	-	71	68.829	ENSJJAG00000017012	-	61	69.091	Jaculus_jaculus
ENSCING00000008865	-	66	67.761	ENSLBEG00000020518	cwc22	61	67.761	Labrus_bergylta
ENSCING00000008865	-	72	64.591	ENSLACG00000005916	CWC22	52	62.862	Latimeria_chalumnae
ENSCING00000008865	-	70	67.897	ENSLOCG00000006456	cwc22	57	67.455	Lepisosteus_oculatus
ENSCING00000008865	-	72	66.903	ENSLAFG00000014802	CWC22	61	66.966	Loxodonta_africana
ENSCING00000008865	-	72	68.085	ENSMFAG00000000590	CWC22	65	68.223	Macaca_fascicularis
ENSCING00000008865	-	72	68.085	ENSMMUG00000020642	CWC22	64	68.223	Macaca_mulatta
ENSCING00000008865	-	72	68.085	ENSMNEG00000034567	CWC22	62	68.223	Macaca_nemestrina
ENSCING00000008865	-	71	68.829	ENSMLEG00000042344	CWC22	62	68.223	Mandrillus_leucophaeus
ENSCING00000008865	-	72	66.429	ENSMGAG00000009220	CWC22	62	65.591	Meleagris_gallopavo
ENSCING00000008865	-	60	67.230	ENSMAUG00000016154	-	62	67.308	Mesocricetus_auratus
ENSCING00000008865	-	71	68.705	ENSMICG00000016919	CWC22	62	67.921	Microcebus_murinus
ENSCING00000008865	-	66	67.961	ENSMMOG00000019720	cwc22	74	67.961	Mola_mola
ENSCING00000008865	-	71	68.478	ENSMODG00000010233	-	60	68.556	Monodelphis_domestica
ENSCING00000008865	-	70	64.717	ENSMODG00000020117	-	99	63.934	Monodelphis_domestica
ENSCING00000008865	-	70	64.587	ENSMODG00000003711	-	99	63.803	Monodelphis_domestica
ENSCING00000008865	-	92	58.300	MGP_CAROLIEiJ_G0023696	-	76	67.684	Mus_caroli
ENSCING00000008865	-	72	67.019	ENSMUSG00000094336	Gm13693	67	66.904	Mus_musculus
ENSCING00000008865	-	72	67.019	ENSMUSG00000096484	Gm13696	67	66.904	Mus_musculus
ENSCING00000008865	-	72	67.019	ENSMUSG00000079247	Gm13691	67	66.904	Mus_musculus
ENSCING00000008865	-	72	67.019	ENSMUSG00000096337	Gm13694	67	66.904	Mus_musculus
ENSCING00000008865	-	72	67.019	ENSMUSG00000095824	Gm13697	67	66.904	Mus_musculus
ENSCING00000008865	-	72	67.019	ENSMUSG00000096729	Gm13695	67	66.726	Mus_musculus
ENSCING00000008865	-	71	68.165	ENSMUSG00000027014	Cwc22	76	68.058	Mus_musculus
ENSCING00000008865	-	72	67.019	ENSMUSG00000094125	Gm13698	67	66.904	Mus_musculus
ENSCING00000008865	-	93	57.823	MGP_PahariEiJ_G0025147	-	75	68.354	Mus_pahari
ENSCING00000008865	-	72	67.673	ENSMPUG00000002432	CWC22	61	68.043	Mustela_putorius_furo
ENSCING00000008865	-	72	67.851	ENSMLUG00000013437	-	66	68.223	Myotis_lucifugus
ENSCING00000008865	-	72	66.607	ENSMLUG00000024966	-	70	66.905	Myotis_lucifugus
ENSCING00000008865	-	64	67.800	ENSNGAG00000013881	-	75	67.396	Nannospalax_galili
ENSCING00000008865	-	72	68.085	ENSNLEG00000006248	CWC22	61	68.223	Nomascus_leucogenys
ENSCING00000008865	-	69	63.119	ENSMEUG00000011026	CWC22	96	63.265	Notamacropus_eugenii
ENSCING00000008865	-	60	66.737	ENSOPRG00000007844	CWC22	57	66.880	Ochotona_princeps
ENSCING00000008865	-	60	62.553	ENSODEG00000005934	-	70	62.473	Octodon_degus
ENSCING00000008865	-	66	66.667	ENSODEG00000007673	CWC22	81	66.733	Octodon_degus
ENSCING00000008865	-	93	54.759	ENSOANG00000008649	CWC22	68	67.437	Ornithorhynchus_anatinus
ENSCING00000008865	-	69	68.785	ENSORLG00000010538	cwc22	57	68.199	Oryzias_latipes
ENSCING00000008865	-	69	68.785	ENSORLG00020015117	cwc22	57	68.199	Oryzias_latipes_hni
ENSCING00000008865	-	69	68.333	ENSORLG00015018073	cwc22	57	68.199	Oryzias_latipes_hsok
ENSCING00000008865	-	71	68.231	ENSOMEG00000015199	cwc22	58	68.681	Oryzias_melastigma
ENSCING00000008865	-	71	68.649	ENSOGAG00000015287	CWC22	61	68.402	Otolemur_garnettii
ENSCING00000008865	-	72	67.673	ENSOARG00000016905	CWC22	62	68.043	Ovis_aries
ENSCING00000008865	-	72	68.142	ENSPPAG00000027833	CWC22	62	68.043	Pan_paniscus
ENSCING00000008865	-	72	67.851	ENSPPRG00000001389	CWC22	61	68.223	Panthera_pardus
ENSCING00000008865	-	72	67.851	ENSPTIG00000019139	CWC22	61	68.223	Panthera_tigris_altaica
ENSCING00000008865	-	71	68.829	ENSPTRG00000012698	CWC22	61	68.223	Pan_troglodytes
ENSCING00000008865	-	71	68.829	ENSPANG00000018976	CWC22	62	68.223	Papio_anubis
ENSCING00000008865	-	71	67.384	ENSPKIG00000021346	cwc22	64	64.351	Paramormyrops_kingsleyae
ENSCING00000008865	-	71	67.148	ENSPSIG00000008632	CWC22	61	67.213	Pelodiscus_sinensis
ENSCING00000008865	-	71	62.007	ENSPMGG00000020129	cwc22	56	63.919	Periophthalmus_magnuspinnatus
ENSCING00000008865	-	91	54.354	ENSPEMG00000023936	-	79	65.586	Peromyscus_maniculatus_bairdii
ENSCING00000008865	-	92	53.958	ENSPMAG00000005914	cwc22	68	65.292	Petromyzon_marinus
ENSCING00000008865	-	72	67.979	ENSPCIG00000009903	-	77	68.108	Phascolarctos_cinereus
ENSCING00000008865	-	71	68.592	ENSPFOG00000015025	cwc22	75	66.491	Poecilia_formosa
ENSCING00000008865	-	71	68.592	ENSPLAG00000021405	cwc22	54	68.921	Poecilia_latipinna
ENSCING00000008865	-	71	68.592	ENSPMEG00000007850	cwc22	54	68.921	Poecilia_mexicana
ENSCING00000008865	-	71	64.748	ENSPREG00000004312	cwc22	64	64.621	Poecilia_reticulata
ENSCING00000008865	-	71	68.829	ENSPPYG00000012986	CWC22	60	68.909	Pongo_abelii
ENSCING00000008865	-	61	74.699	ENSPCOG00000010195	CWC22	57	66.833	Propithecus_coquereli
ENSCING00000008865	-	72	67.438	ENSPVAG00000011497	CWC22	61	67.806	Pteropus_vampyrus
ENSCING00000008865	-	71	66.123	ENSPNYG00000010435	cwc22	78	66.544	Pundamilia_nyererei
ENSCING00000008865	-	71	65.766	ENSRNOG00000012651	Cwc22	60	64.652	Rattus_norvegicus
ENSCING00000008865	-	71	65.108	ENSRNOG00000038322	LOC500684	60	64.534	Rattus_norvegicus
ENSCING00000008865	-	71	66.126	ENSRBIG00000036751	CWC22	61	65.889	Rhinopithecus_bieti
ENSCING00000008865	-	71	68.829	ENSRROG00000037520	CWC22	62	68.223	Rhinopithecus_roxellana
ENSCING00000008865	-	71	66.306	ENSSBOG00000021683	CWC22	60	65.889	Saimiri_boliviensis_boliviensis
ENSCING00000008865	-	71	62.138	ENSSHAG00000004040	-	75	62.088	Sarcophilus_harrisii
ENSCING00000008865	-	72	66.725	ENSSHAG00000016596	-	64	67.077	Sarcophilus_harrisii
ENSCING00000008865	-	66	65.422	ENSSFOG00015010559	cwc22	61	62.403	Scleropages_formosus
ENSCING00000008865	-	71	66.245	ENSSMAG00000004724	cwc22	56	66.545	Scophthalmus_maximus
ENSCING00000008865	-	71	68.297	ENSSDUG00000010656	cwc22	55	68.624	Seriola_dumerili
ENSCING00000008865	-	71	68.116	ENSSLDG00000023157	cwc22	78	68.440	Seriola_lalandi_dorsalis
ENSCING00000008865	-	70	64.964	ENSSPUG00000006395	CWC22	62	65.074	Sphenodon_punctatus
ENSCING00000008865	-	71	68.841	ENSSPAG00000008746	cwc22	54	69.174	Stegastes_partitus
ENSCING00000008865	-	72	68.028	ENSSSCG00000016008	CWC22	61	68.354	Sus_scrofa
ENSCING00000008865	-	71	66.727	ENSTRUG00000014411	cwc22	58	67.031	Takifugu_rubripes
ENSCING00000008865	-	71	65.845	ENSTNIG00000005074	cwc22	73	65.841	Tetraodon_nigroviridis
ENSCING00000008865	-	71	54.758	ENSTBEG00000014539	CWC22	51	67.742	Tupaia_belangeri
ENSCING00000008865	-	71	68.592	ENSTTRG00000012142	CWC22	62	68.223	Tursiops_truncatus
ENSCING00000008865	-	71	68.108	ENSVPAG00000008565	CWC22	60	68.545	Vicugna_pacos
ENSCING00000008865	-	72	67.851	ENSVVUG00000009738	CWC22	59	63.291	Vulpes_vulpes
ENSCING00000008865	-	70	66.545	ENSXETG00000014099	cwc22	71	66.182	Xenopus_tropicalis
ENSCING00000008865	-	71	68.051	ENSXMAG00000013201	cwc22	55	68.373	Xiphophorus_maculatus