EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008937 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2025 bases
Position: chr3:5326588-5328612
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018157	HGTP_anticodon	PF03129.20	5.3e-17	1	1
ENSCINP00000018157	tRNA-synt_2b	PF00587.25	8.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018157	-	2025	-	ENSCINP00000018157	675 (aa)	-	F6Q9P9

Gene Model

Click here to download ENSCING00000008937's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008937	-	100	63.368	ENSG00000106105	GARS	91	63.368	Homo_sapiens
ENSCING00000008937	-	99	59.320	ENSAPOG00000020089	gars	99	59.320	Acanthochromis_polyacanthus
ENSCING00000008937	-	99	63.407	ENSAPOG00000019999	gars	90	63.407	Acanthochromis_polyacanthus
ENSCING00000008937	-	100	63.018	ENSAMEG00000006652	GARS	92	63.018	Ailuropoda_melanoleuca
ENSCING00000008937	-	99	60.000	ENSACIG00000020797	gars	98	60.000	Amphilophus_citrinellus
ENSCING00000008937	-	99	62.166	ENSACIG00000020744	gars	90	62.166	Amphilophus_citrinellus
ENSCING00000008937	-	75	59.802	ENSAOCG00000002479	gars	99	59.802	Amphiprion_ocellaris
ENSCING00000008937	-	99	63.407	ENSAOCG00000009108	gars	90	63.407	Amphiprion_ocellaris
ENSCING00000008937	-	99	63.259	ENSAPEG00000018850	gars	90	63.259	Amphiprion_percula
ENSCING00000008937	-	99	59.111	ENSAPEG00000018903	gars	98	59.111	Amphiprion_percula
ENSCING00000008937	-	99	62.353	ENSATEG00000008784	gars	99	63.387	Anabas_testudineus
ENSCING00000008937	-	66	66.815	ENSAPLG00000015638	-	96	66.815	Anas_platyrhynchos
ENSCING00000008937	-	99	62.593	ENSACAG00000005601	GARS	98	62.593	Anolis_carolinensis
ENSCING00000008937	-	100	63.959	ENSANAG00000022536	GARS	99	63.959	Aotus_nancymaae
ENSCING00000008937	-	99	62.611	ENSACLG00000027174	gars	90	62.611	Astatotilapia_calliptera
ENSCING00000008937	-	99	59.613	ENSACLG00000027158	gars	98	59.613	Astatotilapia_calliptera
ENSCING00000008937	-	99	58.990	ENSAMXG00000014895	gars	94	63.435	Astyanax_mexicanus
ENSCING00000008937	-	100	63.462	ENSBTAG00000018972	GARS	91	63.462	Bos_taurus
ENSCING00000008937	-	99	53.561	WBGene00001744	gars-1	99	53.561	Caenorhabditis_elegans
ENSCING00000008937	-	100	63.959	ENSCJAG00000008595	GARS	93	63.663	Callithrix_jacchus
ENSCING00000008937	-	100	63.314	ENSCAFG00000003086	GARS	85	63.314	Canis_familiaris
ENSCING00000008937	-	100	63.314	ENSCAFG00020004272	GARS	97	63.314	Canis_lupus_dingo
ENSCING00000008937	-	100	63.609	ENSCHIG00000016912	GARS	98	64.415	Capra_hircus
ENSCING00000008937	-	100	63.166	ENSTSYG00000008538	GARS	91	63.166	Carlito_syrichta
ENSCING00000008937	-	82	60.044	ENSCAPG00000007526	GARS	96	60.044	Cavia_aperea
ENSCING00000008937	-	99	64.168	ENSCPOG00000007547	GARS	92	64.168	Cavia_porcellus
ENSCING00000008937	-	100	63.959	ENSCCAG00000011512	GARS	91	63.959	Cebus_capucinus
ENSCING00000008937	-	100	63.663	ENSCATG00000036699	GARS	91	63.663	Cercocebus_atys
ENSCING00000008937	-	100	64.053	ENSCLAG00000007985	GARS	95	64.053	Chinchilla_lanigera
ENSCING00000008937	-	100	63.663	ENSCSAG00000014588	GARS	91	63.663	Chlorocebus_sabaeus
ENSCING00000008937	-	100	55.030	ENSCHOG00000003253	GARS	91	55.030	Choloepus_hoffmanni
ENSCING00000008937	-	97	63.014	ENSCPBG00000019482	GARS	90	63.014	Chrysemys_picta_bellii
ENSCING00000008937	-	100	63.663	ENSCANG00000027727	GARS	91	63.663	Colobus_angolensis_palliatus
ENSCING00000008937	-	99	63.636	ENSCGRG00001020450	Gars	92	63.338	Cricetulus_griseus_chok1gshd
ENSCING00000008937	-	97	63.775	ENSCGRG00000008342	Gars	93	63.775	Cricetulus_griseus_crigri
ENSCING00000008937	-	99	63.111	ENSCSEG00000017671	gars	90	63.111	Cynoglossus_semilaevis
ENSCING00000008937	-	99	54.086	ENSCSEG00000017654	gars	97	54.086	Cynoglossus_semilaevis
ENSCING00000008937	-	100	62.870	ENSCVAG00000007149	gars	90	62.870	Cyprinodon_variegatus
ENSCING00000008937	-	99	62.611	ENSDARG00000059070	gars	98	62.611	Danio_rerio
ENSCING00000008937	-	100	62.426	ENSDNOG00000046478	GARS	98	62.308	Dasypus_novemcinctus
ENSCING00000008937	-	100	63.811	ENSDORG00000002672	Gars	93	63.811	Dipodomys_ordii
ENSCING00000008937	-	100	56.509	FBgn0027088	GlyRS	99	56.509	Drosophila_melanogaster
ENSCING00000008937	-	90	61.765	ENSETEG00000012196	GARS	95	61.765	Echinops_telfairi
ENSCING00000008937	-	70	62.185	ENSEBUG00000002254	gars	88	62.185	Eptatretus_burgeri
ENSCING00000008937	-	71	58.921	ENSEBUG00000002654	gars	87	58.921	Eptatretus_burgeri
ENSCING00000008937	-	100	63.314	ENSEASG00005000388	GARS	91	63.314	Equus_asinus_asinus
ENSCING00000008937	-	100	63.314	ENSECAG00000019373	GARS	91	63.314	Equus_caballus
ENSCING00000008937	-	99	62.259	ENSELUG00000003692	gars	90	62.259	Esox_lucius
ENSCING00000008937	-	100	63.166	ENSFCAG00000011415	GARS	80	63.166	Felis_catus
ENSCING00000008937	-	90	63.427	ENSFALG00000006550	GARS	98	63.427	Ficedula_albicollis
ENSCING00000008937	-	97	65.145	ENSFDAG00000014466	GARS	98	65.145	Fukomys_damarensis
ENSCING00000008937	-	100	63.166	ENSFHEG00000013189	gars	90	63.166	Fundulus_heteroclitus
ENSCING00000008937	-	99	62.166	ENSGMOG00000010728	gars	90	62.166	Gadus_morhua
ENSCING00000008937	-	92	57.532	ENSGMOG00000008856	-	99	57.532	Gadus_morhua
ENSCING00000008937	-	100	62.870	ENSGALG00000005694	GARS	99	62.870	Gallus_gallus
ENSCING00000008937	-	100	63.314	ENSGAFG00000005228	gars	90	63.314	Gambusia_affinis
ENSCING00000008937	-	99	62.667	ENSGACG00000003410	gars	90	62.667	Gasterosteus_aculeatus
ENSCING00000008937	-	90	64.145	ENSGAGG00000017755	GARS	97	64.145	Gopherus_agassizii
ENSCING00000008937	-	100	63.516	ENSGGOG00000004916	GARS	91	63.516	Gorilla_gorilla
ENSCING00000008937	-	99	62.760	ENSHBUG00000016481	gars	90	62.760	Haplochromis_burtoni
ENSCING00000008937	-	99	59.613	ENSHBUG00000000815	gars	98	59.613	Haplochromis_burtoni
ENSCING00000008937	-	100	64.845	ENSHGLG00000016342	GARS	91	64.845	Heterocephalus_glaber_female
ENSCING00000008937	-	100	64.549	ENSHGLG00100006787	GARS	95	64.549	Heterocephalus_glaber_male
ENSCING00000008937	-	99	61.926	ENSHCOG00000005261	gars	98	61.926	Hippocampus_comes
ENSCING00000008937	-	52	52.125	ENSHCOG00000005286	gars	98	45.953	Hippocampus_comes
ENSCING00000008937	-	99	59.496	ENSIPUG00000011443	gars	90	59.496	Ictalurus_punctatus
ENSCING00000008937	-	100	62.958	ENSSTOG00000015493	GARS	90	62.958	Ictidomys_tridecemlineatus
ENSCING00000008937	-	100	63.609	ENSJJAG00000022474	Gars	97	63.609	Jaculus_jaculus
ENSCING00000008937	-	99	62.815	ENSKMAG00000010428	gars	89	62.815	Kryptolebias_marmoratus
ENSCING00000008937	-	99	62.815	ENSLBEG00000019228	gars	90	62.815	Labrus_bergylta
ENSCING00000008937	-	99	59.701	ENSLBEG00000019179	gars	99	59.701	Labrus_bergylta
ENSCING00000008937	-	57	55.352	ENSLBEG00000013122	-	98	55.352	Labrus_bergylta
ENSCING00000008937	-	76	62.427	ENSLACG00000002810	GARS	98	62.427	Latimeria_chalumnae
ENSCING00000008937	-	99	63.056	ENSLOCG00000009688	gars	89	63.056	Lepisosteus_oculatus
ENSCING00000008937	-	100	62.722	ENSLAFG00000002496	GARS	98	62.242	Loxodonta_africana
ENSCING00000008937	-	100	63.663	ENSMFAG00000038863	GARS	91	63.663	Macaca_fascicularis
ENSCING00000008937	-	100	63.663	ENSMMUG00000004719	GARS	91	63.663	Macaca_mulatta
ENSCING00000008937	-	100	58.198	ENSMNEG00000043203	GARS	91	58.198	Macaca_nemestrina
ENSCING00000008937	-	100	63.663	ENSMLEG00000044430	GARS	91	63.663	Mandrillus_leucophaeus
ENSCING00000008937	-	99	62.222	ENSMAMG00000001894	gars	97	61.760	Mastacembelus_armatus
ENSCING00000008937	-	99	59.851	ENSMZEG00005019754	gars	99	59.851	Maylandia_zebra
ENSCING00000008937	-	99	62.760	ENSMZEG00005019740	gars	90	62.760	Maylandia_zebra
ENSCING00000008937	-	100	62.870	ENSMGAG00000003162	GARS	91	62.870	Meleagris_gallopavo
ENSCING00000008937	-	99	63.934	ENSMAUG00000016852	Gars	92	63.934	Mesocricetus_auratus
ENSCING00000008937	-	100	63.462	ENSMICG00000046006	GARS	99	63.462	Microcebus_murinus
ENSCING00000008937	-	99	63.785	ENSMOCG00000017680	Gars	92	63.785	Microtus_ochrogaster
ENSCING00000008937	-	99	60.266	ENSMMOG00000009695	gars	90	60.266	Mola_mola
ENSCING00000008937	-	99	62.370	ENSMALG00000006592	gars	83	62.370	Monopterus_albus
ENSCING00000008937	-	99	64.083	MGP_CAROLIEiJ_G0028410	Gars	92	64.083	Mus_caroli
ENSCING00000008937	-	99	64.083	ENSMUSG00000029777	Gars	92	64.083	Mus_musculus
ENSCING00000008937	-	99	64.083	MGP_PahariEiJ_G0022160	Gars	92	64.083	Mus_pahari
ENSCING00000008937	-	99	64.083	MGP_SPRETEiJ_G0029412	Gars	97	69.466	Mus_spretus
ENSCING00000008937	-	100	63.314	ENSMPUG00000005116	GARS	91	63.314	Mustela_putorius_furo
ENSCING00000008937	-	100	62.870	ENSMLUG00000002043	GARS	92	62.870	Myotis_lucifugus
ENSCING00000008937	-	99	63.582	ENSNGAG00000021844	Gars	92	63.582	Nannospalax_galili
ENSCING00000008937	-	57	55.469	ENSNBRG00000018643	gars	98	55.469	Neolamprologus_brichardi
ENSCING00000008937	-	99	62.908	ENSNBRG00000018585	gars	90	62.908	Neolamprologus_brichardi
ENSCING00000008937	-	100	63.811	ENSNLEG00000015152	GARS	91	63.811	Nomascus_leucogenys
ENSCING00000008937	-	97	57.470	ENSMEUG00000001741	GARS	99	57.470	Notamacropus_eugenii
ENSCING00000008937	-	87	68.170	ENSOPRG00000005342	GARS	79	68.170	Ochotona_princeps
ENSCING00000008937	-	100	63.583	ENSODEG00000008246	GARS	86	63.583	Octodon_degus
ENSCING00000008937	-	97	62.614	ENSOANG00000006262	GARS	89	62.614	Ornithorhynchus_anatinus
ENSCING00000008937	-	100	62.870	ENSOCUG00000005295	GARS	99	62.870	Oryctolagus_cuniculus
ENSCING00000008937	-	100	61.947	ENSORLG00000009470	gars	90	61.947	Oryzias_latipes
ENSCING00000008937	-	95	63.354	ENSORLG00020013036	gars	97	57.069	Oryzias_latipes_hni
ENSCING00000008937	-	99	62.611	ENSORLG00015012886	gars	90	62.611	Oryzias_latipes_hsok
ENSCING00000008937	-	57	55.844	ENSOMEG00000000133	gars	97	55.844	Oryzias_melastigma
ENSCING00000008937	-	100	62.722	ENSOGAG00000013321	GARS	91	62.722	Otolemur_garnettii
ENSCING00000008937	-	100	63.609	ENSOARG00000008017	GARS	91	63.609	Ovis_aries
ENSCING00000008937	-	100	63.516	ENSPPAG00000037266	GARS	92	63.516	Pan_paniscus
ENSCING00000008937	-	100	63.166	ENSPPRG00000001917	GARS	91	63.166	Panthera_pardus
ENSCING00000008937	-	100	63.166	ENSPTIG00000016096	GARS	99	63.166	Panthera_tigris_altaica
ENSCING00000008937	-	100	63.516	ENSPTRG00000019042	GARS	91	63.516	Pan_troglodytes
ENSCING00000008937	-	100	63.663	ENSPANG00000026231	GARS	91	63.663	Papio_anubis
ENSCING00000008937	-	99	62.500	ENSPKIG00000014863	gars	87	62.500	Paramormyrops_kingsleyae
ENSCING00000008937	-	97	63.623	ENSPSIG00000010935	GARS	98	64.745	Pelodiscus_sinensis
ENSCING00000008937	-	99	59.416	ENSPMGG00000023644	gars	90	59.416	Periophthalmus_magnuspinnatus
ENSCING00000008937	-	57	55.784	ENSPMGG00000023648	gars	98	55.784	Periophthalmus_magnuspinnatus
ENSCING00000008937	-	97	63.720	ENSPEMG00000019930	Gars	98	63.720	Peromyscus_maniculatus_bairdii
ENSCING00000008937	-	100	59.677	ENSPMAG00000006586	gars	98	59.677	Petromyzon_marinus
ENSCING00000008937	-	100	61.538	ENSPCIG00000017010	GARS	89	61.538	Phascolarctos_cinereus
ENSCING00000008937	-	100	63.314	ENSPFOG00000004593	gars	90	63.314	Poecilia_formosa
ENSCING00000008937	-	100	63.314	ENSPLAG00000008038	gars	90	63.314	Poecilia_latipinna
ENSCING00000008937	-	100	63.314	ENSPMEG00000005901	gars	90	63.314	Poecilia_mexicana
ENSCING00000008937	-	100	63.166	ENSPREG00000020960	gars	88	63.166	Poecilia_reticulata
ENSCING00000008937	-	100	63.368	ENSPPYG00000017673	GARS	91	63.368	Pongo_abelii
ENSCING00000008937	-	100	61.982	ENSPCAG00000007199	GARS	91	61.982	Procavia_capensis
ENSCING00000008937	-	100	61.982	ENSPCOG00000008887	GARS	91	61.982	Propithecus_coquereli
ENSCING00000008937	-	100	63.609	ENSPVAG00000013565	GARS	91	63.609	Pteropus_vampyrus
ENSCING00000008937	-	99	59.613	ENSPNYG00000004960	gars	98	59.613	Pundamilia_nyererei
ENSCING00000008937	-	99	62.611	ENSPNYG00000005017	gars	90	62.611	Pundamilia_nyererei
ENSCING00000008937	-	99	61.276	ENSPNAG00000020164	gars	90	61.276	Pygocentrus_nattereri
ENSCING00000008937	-	99	64.083	ENSRNOG00000011052	Gars	92	64.083	Rattus_norvegicus
ENSCING00000008937	-	100	62.426	ENSRBIG00000040287	GARS	91	62.426	Rhinopithecus_bieti
ENSCING00000008937	-	100	63.811	ENSRROG00000044600	GARS	91	63.811	Rhinopithecus_roxellana
ENSCING00000008937	-	89	45.695	YPR081C	-	97	45.695	Saccharomyces_cerevisiae
ENSCING00000008937	-	91	47.531	YBR121C	GRS1	97	47.840	Saccharomyces_cerevisiae
ENSCING00000008937	-	100	63.811	ENSSBOG00000022287	GARS	91	63.811	Saimiri_boliviensis_boliviensis
ENSCING00000008937	-	99	58.050	ENSSHAG00000003419	GARS	98	58.050	Sarcophilus_harrisii
ENSCING00000008937	-	99	63.501	ENSSFOG00015000573	gars	88	63.501	Scleropages_formosus
ENSCING00000008937	-	99	60.896	ENSSMAG00000013709	gars	99	60.896	Scophthalmus_maximus
ENSCING00000008937	-	99	62.315	ENSSMAG00000013672	gars	90	62.315	Scophthalmus_maximus
ENSCING00000008937	-	99	62.315	ENSSDUG00000016795	gars	90	62.315	Seriola_dumerili
ENSCING00000008937	-	99	54.613	ENSSDUG00000016758	gars	99	54.613	Seriola_dumerili
ENSCING00000008937	-	99	62.611	ENSSLDG00000014279	gars	90	62.611	Seriola_lalandi_dorsalis
ENSCING00000008937	-	99	62.090	ENSSLDG00000014238	gars	99	62.090	Seriola_lalandi_dorsalis
ENSCING00000008937	-	76	62.454	ENSSARG00000008410	GARS	82	62.454	Sorex_araneus
ENSCING00000008937	-	99	62.722	ENSSPUG00000001815	-	90	62.722	Sphenodon_punctatus
ENSCING00000008937	-	53	57.103	ENSSPAG00000011882	gars	98	57.103	Stegastes_partitus
ENSCING00000008937	-	99	60.148	ENSSPAG00000012003	gars	89	60.148	Stegastes_partitus
ENSCING00000008937	-	100	63.018	ENSSSCG00000016677	GARS	91	63.018	Sus_scrofa
ENSCING00000008937	-	97	61.725	ENSTGUG00000000364	GARS	99	61.725	Taeniopygia_guttata
ENSCING00000008937	-	99	61.424	ENSTRUG00000017557	gars	90	61.424	Takifugu_rubripes
ENSCING00000008937	-	99	61.424	ENSTNIG00000012738	gars	95	61.424	Tetraodon_nigroviridis
ENSCING00000008937	-	95	58.685	ENSTBEG00000008972	GARS	86	58.685	Tupaia_belangeri
ENSCING00000008937	-	98	63.182	ENSTTRG00000000334	GARS	99	63.182	Tursiops_truncatus
ENSCING00000008937	-	100	63.314	ENSUAMG00000016756	GARS	91	63.314	Ursus_americanus
ENSCING00000008937	-	99	62.275	ENSUMAG00000002158	GARS	98	64.086	Ursus_maritimus
ENSCING00000008937	-	100	56.953	ENSVPAG00000009438	GARS	93	56.953	Vicugna_pacos
ENSCING00000008937	-	100	63.314	ENSVVUG00000020981	GARS	86	63.314	Vulpes_vulpes
ENSCING00000008937	-	100	62.281	ENSXETG00000018474	gars	91	62.281	Xenopus_tropicalis
ENSCING00000008937	-	100	62.647	ENSXCOG00000010005	gars	90	62.647	Xiphophorus_couchianus
ENSCING00000008937	-	100	63.314	ENSXMAG00000009402	gars	88	63.314	Xiphophorus_maculatus