EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008962 (Gene tree)
Gene ID: 100182665
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1848 bases
Position: chr3:5167980-5169827
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018197	tRNA_SAD	PF07973.14	2.8e-09	1	1
ENSCINP00000018197	tRNA-synt_2c	PF01411.19	6.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018197	-	1244	-	ENSCINP00000018197	405 (aa)	-	F6Q5L2

Gene Model

Click here to download ENSCING00000008962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008962's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008962	-	97	51.786	ENSG00000108825	PTGES3L-AARSD1	79	51.786	Homo_sapiens
ENSCING00000008962	-	100	51.852	ENSG00000266967	AARSD1	100	58.571	Homo_sapiens
ENSCING00000008962	-	100	52.840	ENSAPOG00000006776	aarsd1	98	52.840	Acanthochromis_polyacanthus
ENSCING00000008962	-	97	51.786	ENSAMEG00000000205	-	67	51.786	Ailuropoda_melanoleuca
ENSCING00000008962	-	100	53.827	ENSACIG00000001519	aarsd1	98	53.827	Amphilophus_citrinellus
ENSCING00000008962	-	100	50.370	ENSAOCG00000014735	aarsd1	97	50.370	Amphiprion_ocellaris
ENSCING00000008962	-	100	53.086	ENSAPEG00000004670	aarsd1	98	53.086	Amphiprion_percula
ENSCING00000008962	-	100	50.246	ENSATEG00000014178	aarsd1	97	50.246	Anabas_testudineus
ENSCING00000008962	-	86	55.587	ENSAPLG00000004132	-	95	55.587	Anas_platyrhynchos
ENSCING00000008962	-	98	54.293	ENSACAG00000013559	-	96	54.293	Anolis_carolinensis
ENSCING00000008962	-	98	51.768	ENSANAG00000028981	-	97	51.768	Aotus_nancymaae
ENSCING00000008962	-	100	53.086	ENSANAG00000022313	-	98	53.086	Aotus_nancymaae
ENSCING00000008962	-	100	53.086	ENSACLG00000013655	aarsd1	97	48.276	Astatotilapia_calliptera
ENSCING00000008962	-	100	54.321	ENSAMXG00000031615	aarsd1	98	54.321	Astyanax_mexicanus
ENSCING00000008962	-	100	48.276	ENSBTAG00000015136	AARSD1	98	48.276	Bos_taurus
ENSCING00000008962	-	100	52.840	ENSCJAG00000013086	-	98	52.840	Callithrix_jacchus
ENSCING00000008962	-	97	51.276	ENSCAFG00000014638	-	67	51.276	Canis_familiaris
ENSCING00000008962	-	100	51.358	ENSCAFG00020013016	-	80	51.358	Canis_lupus_dingo
ENSCING00000008962	-	100	51.605	ENSCHIG00000006766	-	98	51.605	Capra_hircus
ENSCING00000008962	-	75	47.059	ENSTSYG00000034407	-	89	47.059	Carlito_syrichta
ENSCING00000008962	-	92	50.267	ENSCAPG00000014195	-	79	50.267	Cavia_aperea
ENSCING00000008962	-	100	51.358	ENSCPOG00000030193	-	98	51.358	Cavia_porcellus
ENSCING00000008962	-	100	53.086	ENSCCAG00000033455	-	98	53.086	Cebus_capucinus
ENSCING00000008962	-	100	52.593	ENSCATG00000023451	-	98	52.593	Cercocebus_atys
ENSCING00000008962	-	100	47.202	ENSCLAG00000016486	-	98	47.202	Chinchilla_lanigera
ENSCING00000008962	-	100	52.346	ENSCSAG00000003373	-	98	52.346	Chlorocebus_sabaeus
ENSCING00000008962	-	97	43.622	ENSCHOG00000004531	-	74	43.622	Choloepus_hoffmanni
ENSCING00000008962	-	100	52.346	ENSCPBG00000016295	-	84	52.346	Chrysemys_picta_bellii
ENSCING00000008962	-	100	74.815	ENSCSAVG00000000488	-	99	74.815	Ciona_savignyi
ENSCING00000008962	-	100	52.593	ENSCANG00000041605	-	98	52.593	Colobus_angolensis_palliatus
ENSCING00000008962	-	100	51.605	ENSCGRG00001022384	-	98	51.605	Cricetulus_griseus_chok1gshd
ENSCING00000008962	-	100	51.605	ENSCGRG00000015974	-	98	51.605	Cricetulus_griseus_crigri
ENSCING00000008962	-	100	51.605	ENSCSEG00000000523	aarsd1	98	51.605	Cynoglossus_semilaevis
ENSCING00000008962	-	100	55.062	ENSCVAG00000018616	aarsd1	98	55.062	Cyprinodon_variegatus
ENSCING00000008962	-	100	52.840	ENSDARG00000015747	aarsd1	98	52.840	Danio_rerio
ENSCING00000008962	-	100	52.346	ENSDNOG00000040976	-	92	52.346	Dasypus_novemcinctus
ENSCING00000008962	-	100	50.123	ENSDORG00000016028	-	98	50.123	Dipodomys_ordii
ENSCING00000008962	-	97	42.574	FBgn0029664	CG10802	92	42.574	Drosophila_melanogaster
ENSCING00000008962	-	96	38.918	ENSETEG00000016031	-	74	38.918	Echinops_telfairi
ENSCING00000008962	-	90	49.863	ENSEBUG00000010336	aarsd1	97	49.863	Eptatretus_burgeri
ENSCING00000008962	-	100	51.605	ENSEASG00005010061	-	98	51.605	Equus_asinus_asinus
ENSCING00000008962	-	98	52.525	ENSECAG00000009275	-	91	53.369	Equus_caballus
ENSCING00000008962	-	97	50.127	ENSEEUG00000008897	-	74	50.127	Erinaceus_europaeus
ENSCING00000008962	-	100	51.605	ENSELUG00000007588	aarsd1	99	51.605	Esox_lucius
ENSCING00000008962	-	100	51.852	ENSFCAG00000038399	-	58	51.852	Felis_catus
ENSCING00000008962	-	86	54.310	ENSFALG00000000757	-	63	54.310	Ficedula_albicollis
ENSCING00000008962	-	100	51.852	ENSFHEG00000019252	aarsd1	98	51.852	Fundulus_heteroclitus
ENSCING00000008962	-	98	52.911	ENSGMOG00000013229	aarsd1	75	52.911	Gadus_morhua
ENSCING00000008962	-	100	52.593	ENSGALG00000002880	AARSD1	98	52.593	Gallus_gallus
ENSCING00000008962	-	100	53.317	ENSGAFG00000011085	aarsd1	98	53.317	Gambusia_affinis
ENSCING00000008962	-	100	53.580	ENSGACG00000009815	aarsd1	98	53.580	Gasterosteus_aculeatus
ENSCING00000008962	-	100	52.593	ENSGAGG00000008103	-	98	52.593	Gopherus_agassizii
ENSCING00000008962	-	100	51.852	ENSGGOG00000006250	PTGES3L-AARSD1	98	51.852	Gorilla_gorilla
ENSCING00000008962	-	100	53.086	ENSHBUG00000022391	aarsd1	98	53.086	Haplochromis_burtoni
ENSCING00000008962	-	99	52.632	ENSHGLG00000010802	-	94	52.632	Heterocephalus_glaber_female
ENSCING00000008962	-	83	52.083	ENSHGLG00100000638	-	93	52.083	Heterocephalus_glaber_male
ENSCING00000008962	-	100	53.448	ENSHCOG00000013491	aarsd1	98	53.448	Hippocampus_comes
ENSCING00000008962	-	100	52.346	ENSIPUG00000010672	aarsd1	98	52.346	Ictalurus_punctatus
ENSCING00000008962	-	100	52.099	ENSSTOG00000000481	-	98	52.099	Ictidomys_tridecemlineatus
ENSCING00000008962	-	91	44.324	ENSSTOG00000029510	-	91	44.324	Ictidomys_tridecemlineatus
ENSCING00000008962	-	100	53.580	ENSJJAG00000011149	-	98	53.580	Jaculus_jaculus
ENSCING00000008962	-	98	53.788	ENSKMAG00000009612	aarsd1	95	53.788	Kryptolebias_marmoratus
ENSCING00000008962	-	98	54.040	ENSLBEG00000008445	aarsd1	95	54.040	Labrus_bergylta
ENSCING00000008962	-	100	53.086	ENSLACG00000006926	aarsd1	98	53.086	Latimeria_chalumnae
ENSCING00000008962	-	98	54.040	ENSLOCG00000012212	aarsd1	96	53.885	Lepisosteus_oculatus
ENSCING00000008962	-	100	51.852	ENSLAFG00000003022	-	98	51.852	Loxodonta_africana
ENSCING00000008962	-	100	52.099	ENSMFAG00000034389	-	98	52.099	Macaca_fascicularis
ENSCING00000008962	-	100	52.099	ENSMMUG00000014123	-	98	52.099	Macaca_mulatta
ENSCING00000008962	-	100	51.852	ENSMNEG00000037015	-	98	51.852	Macaca_nemestrina
ENSCING00000008962	-	100	52.346	ENSMLEG00000038627	-	98	52.346	Mandrillus_leucophaeus
ENSCING00000008962	-	100	53.580	ENSMAMG00000007918	aarsd1	98	53.580	Mastacembelus_armatus
ENSCING00000008962	-	100	52.206	ENSMZEG00005009412	aarsd1	98	52.206	Maylandia_zebra
ENSCING00000008962	-	75	46.865	ENSMGAG00000004245	-	56	46.865	Meleagris_gallopavo
ENSCING00000008962	-	100	51.852	ENSMAUG00000022119	-	98	51.852	Mesocricetus_auratus
ENSCING00000008962	-	100	43.704	ENSMICG00000014185	-	97	43.704	Microcebus_murinus
ENSCING00000008962	-	100	52.099	ENSMOCG00000008732	-	98	52.099	Microtus_ochrogaster
ENSCING00000008962	-	100	51.111	ENSMMOG00000002681	aarsd1	98	51.111	Mola_mola
ENSCING00000008962	-	100	50.000	ENSMODG00000015109	-	59	50.000	Monodelphis_domestica
ENSCING00000008962	-	100	53.827	ENSMALG00000004123	aarsd1	98	53.827	Monopterus_albus
ENSCING00000008962	-	100	51.852	MGP_CAROLIEiJ_G0017216	Aarsd1	98	51.852	Mus_caroli
ENSCING00000008962	-	97	51.786	MGP_CAROLIEiJ_G0017215	Gm27029	74	51.786	Mus_caroli
ENSCING00000008962	-	97	52.041	ENSMUSG00000097239	Gm27029	74	52.041	Mus_musculus
ENSCING00000008962	-	100	52.099	ENSMUSG00000075528	Aarsd1	98	52.099	Mus_musculus
ENSCING00000008962	-	100	51.605	MGP_PahariEiJ_G0018346	-	98	51.605	Mus_pahari
ENSCING00000008962	-	97	51.531	MGP_PahariEiJ_G0018345	-	74	51.531	Mus_pahari
ENSCING00000008962	-	97	51.786	MGP_SPRETEiJ_G0018058	Gm27029	74	51.786	Mus_spretus
ENSCING00000008962	-	100	51.852	MGP_SPRETEiJ_G0018059	Aarsd1	98	51.852	Mus_spretus
ENSCING00000008962	-	100	51.852	ENSMPUG00000009956	-	90	51.852	Mustela_putorius_furo
ENSCING00000008962	-	97	52.163	ENSMLUG00000024369	-	96	51.759	Myotis_lucifugus
ENSCING00000008962	-	100	52.346	ENSNGAG00000010786	-	98	52.346	Nannospalax_galili
ENSCING00000008962	-	100	51.111	ENSNBRG00000021624	aarsd1	97	51.111	Neolamprologus_brichardi
ENSCING00000008962	-	100	52.593	ENSNLEG00000011890	-	98	52.593	Nomascus_leucogenys
ENSCING00000008962	-	86	43.103	ENSMEUG00000010450	-	66	43.103	Notamacropus_eugenii
ENSCING00000008962	-	97	51.531	ENSOPRG00000012708	-	74	51.531	Ochotona_princeps
ENSCING00000008962	-	100	50.864	ENSODEG00000018082	-	98	50.864	Octodon_degus
ENSCING00000008962	-	100	53.827	ENSONIG00000019893	aarsd1	98	53.827	Oreochromis_niloticus
ENSCING00000008962	-	68	40.065	ENSOANG00000013149	-	92	40.065	Ornithorhynchus_anatinus
ENSCING00000008962	-	100	51.605	ENSOCUG00000009259	-	98	51.605	Oryctolagus_cuniculus
ENSCING00000008962	-	99	53.465	ENSORLG00000022752	aarsd1	97	53.465	Oryzias_latipes
ENSCING00000008962	-	100	53.580	ENSORLG00020021477	aarsd1	98	53.580	Oryzias_latipes_hni
ENSCING00000008962	-	99	53.218	ENSORLG00015019664	aarsd1	97	53.218	Oryzias_latipes_hsok
ENSCING00000008962	-	79	56.579	ENSOMEG00000000122	aarsd1	83	56.579	Oryzias_melastigma
ENSCING00000008962	-	100	52.346	ENSOGAG00000003934	-	98	52.346	Otolemur_garnettii
ENSCING00000008962	-	100	51.852	ENSOARG00000004172	-	98	51.852	Ovis_aries
ENSCING00000008962	-	100	51.605	ENSPPAG00000032539	-	98	51.605	Pan_paniscus
ENSCING00000008962	-	100	51.852	ENSPPRG00000013962	-	98	51.852	Panthera_pardus
ENSCING00000008962	-	97	51.908	ENSPTIG00000012989	-	74	51.908	Panthera_tigris_altaica
ENSCING00000008962	-	100	51.852	ENSPTRG00000009230	-	98	51.852	Pan_troglodytes
ENSCING00000008962	-	100	52.099	ENSPANG00000021379	-	98	52.099	Papio_anubis
ENSCING00000008962	-	100	52.840	ENSPKIG00000001834	aarsd1	98	52.840	Paramormyrops_kingsleyae
ENSCING00000008962	-	66	53.731	ENSPSIG00000004931	-	96	53.731	Pelodiscus_sinensis
ENSCING00000008962	-	55	56.561	ENSPMGG00000004258	aarsd1	92	56.561	Periophthalmus_magnuspinnatus
ENSCING00000008962	-	100	52.099	ENSPEMG00000018495	-	98	52.099	Peromyscus_maniculatus_bairdii
ENSCING00000008962	-	100	55.802	ENSPMAG00000002529	aarsd1	98	55.802	Petromyzon_marinus
ENSCING00000008962	-	100	49.756	ENSPCIG00000021490	-	98	49.756	Phascolarctos_cinereus
ENSCING00000008962	-	100	54.815	ENSPFOG00000014083	aarsd1	98	54.815	Poecilia_formosa
ENSCING00000008962	-	100	54.815	ENSPLAG00000023398	aarsd1	98	54.815	Poecilia_latipinna
ENSCING00000008962	-	100	53.695	ENSPMEG00000005191	aarsd1	98	53.695	Poecilia_mexicana
ENSCING00000008962	-	100	55.309	ENSPREG00000004827	aarsd1	98	55.309	Poecilia_reticulata
ENSCING00000008962	-	64	48.846	ENSPPYG00000029909	-	97	48.846	Pongo_abelii
ENSCING00000008962	-	88	53.803	ENSPCAG00000013129	-	74	53.803	Procavia_capensis
ENSCING00000008962	-	99	52.109	ENSPCOG00000014853	-	97	52.109	Propithecus_coquereli
ENSCING00000008962	-	97	47.704	ENSPVAG00000008812	-	74	47.704	Pteropus_vampyrus
ENSCING00000008962	-	100	52.206	ENSPNYG00000019048	aarsd1	98	52.206	Pundamilia_nyererei
ENSCING00000008962	-	100	53.580	ENSPNAG00000000407	aarsd1	98	53.580	Pygocentrus_nattereri
ENSCING00000008962	-	100	51.111	ENSRNOG00000020658	Aarsd1	98	51.111	Rattus_norvegicus
ENSCING00000008962	-	99	52.723	ENSRBIG00000040598	-	93	52.723	Rhinopithecus_bieti
ENSCING00000008962	-	100	52.099	ENSRROG00000030505	-	98	52.099	Rhinopithecus_roxellana
ENSCING00000008962	-	91	54.891	ENSSBOG00000025962	-	99	54.891	Saimiri_boliviensis_boliviensis
ENSCING00000008962	-	100	49.877	ENSSHAG00000012128	-	98	49.877	Sarcophilus_harrisii
ENSCING00000008962	-	100	51.111	ENSSFOG00015008880	aarsd1	98	51.111	Scleropages_formosus
ENSCING00000008962	-	100	54.074	ENSSMAG00000011081	aarsd1	97	54.074	Scophthalmus_maximus
ENSCING00000008962	-	99	54.455	ENSSDUG00000003913	aarsd1	98	54.455	Seriola_dumerili
ENSCING00000008962	-	99	53.960	ENSSLDG00000001645	aarsd1	97	53.960	Seriola_lalandi_dorsalis
ENSCING00000008962	-	100	51.463	ENSSPUG00000004592	-	98	51.463	Sphenodon_punctatus
ENSCING00000008962	-	100	52.840	ENSSPAG00000018029	aarsd1	98	52.840	Stegastes_partitus
ENSCING00000008962	-	100	51.852	ENSSSCG00000037979	-	99	53.372	Sus_scrofa
ENSCING00000008962	-	97	53.944	ENSTGUG00000002837	-	98	53.944	Taeniopygia_guttata
ENSCING00000008962	-	100	51.358	ENSTRUG00000016572	aarsd1	94	56.109	Takifugu_rubripes
ENSCING00000008962	-	98	49.873	ENSTNIG00000012859	aarsd1	74	49.873	Tetraodon_nigroviridis
ENSCING00000008962	-	68	42.545	ENSTBEG00000001124	-	97	42.545	Tupaia_belangeri
ENSCING00000008962	-	97	51.531	ENSTTRG00000011737	-	79	51.531	Tursiops_truncatus
ENSCING00000008962	-	100	51.358	ENSUAMG00000013129	-	98	51.358	Ursus_americanus
ENSCING00000008962	-	100	51.358	ENSUMAG00000025067	-	98	51.358	Ursus_maritimus
ENSCING00000008962	-	80	51.020	ENSVPAG00000002571	-	62	51.020	Vicugna_pacos
ENSCING00000008962	-	100	51.358	ENSVVUG00000023939	-	98	51.358	Vulpes_vulpes
ENSCING00000008962	-	100	49.886	ENSXETG00000013644	aarsd1	95	57.466	Xenopus_tropicalis
ENSCING00000008962	-	100	52.463	ENSXCOG00000017893	aarsd1	98	52.463	Xiphophorus_couchianus
ENSCING00000008962	-	100	54.074	ENSXMAG00000016266	aarsd1	98	54.074	Xiphophorus_maculatus