EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008967 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3925 bases
Position: chr3:5119170-5123094
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018217	Aconitase	PF00330.20	3.4e-43	1	1
ENSCINP00000018217	Aconitase_C	PF00694.19	1.4e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018217	-	1613	-	ENSCINP00000018217	418 (aa)	-	F6PL95

Gene Model

Click here to download ENSCING00000008967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008967's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008967	-	99	74.818	ENSG00000100412	ACO2	53	74.818	Homo_sapiens
ENSCING00000008967	-	99	78.261	ENSAPOG00000017786	aco2	53	78.261	Acanthochromis_polyacanthus
ENSCING00000008967	-	99	79.227	ENSAPOG00000011484	ACO2	53	79.227	Acanthochromis_polyacanthus
ENSCING00000008967	-	99	74.818	ENSAMEG00000015641	ACO2	51	74.818	Ailuropoda_melanoleuca
ENSCING00000008967	-	99	78.261	ENSACIG00000021636	aco2	64	78.261	Amphilophus_citrinellus
ENSCING00000008967	-	99	78.744	ENSAOCG00000020887	aco2	64	78.744	Amphiprion_ocellaris
ENSCING00000008967	-	99	79.469	ENSAOCG00000019100	ACO2	53	79.469	Amphiprion_ocellaris
ENSCING00000008967	-	99	78.744	ENSAPEG00000020171	aco2	53	78.744	Amphiprion_percula
ENSCING00000008967	-	99	79.710	ENSAPEG00000012427	ACO2	53	79.710	Amphiprion_percula
ENSCING00000008967	-	99	78.744	ENSATEG00000008001	ACO2	53	78.744	Anabas_testudineus
ENSCING00000008967	-	99	78.986	ENSATEG00000006397	aco2	64	78.986	Anabas_testudineus
ENSCING00000008967	-	99	78.986	ENSATEG00000007473	aco2	64	78.986	Anabas_testudineus
ENSCING00000008967	-	99	74.940	ENSAPLG00000005198	ACO2	53	74.940	Anas_platyrhynchos
ENSCING00000008967	-	99	76.029	ENSACAG00000004677	-	53	76.029	Anolis_carolinensis
ENSCING00000008967	-	99	75.061	ENSANAG00000029281	ACO2	53	75.061	Aotus_nancymaae
ENSCING00000008967	-	99	78.744	ENSACLG00000019179	aco2	62	70.531	Astatotilapia_calliptera
ENSCING00000008967	-	99	78.019	ENSAMXG00000008808	aco2	53	78.019	Astyanax_mexicanus
ENSCING00000008967	-	99	74.818	ENSBTAG00000006429	ACO2	53	74.818	Bos_taurus
ENSCING00000008967	-	98	74.146	WBGene00000041	aco-2	60	74.146	Caenorhabditis_elegans
ENSCING00000008967	-	99	75.303	ENSCJAG00000005004	ACO2	65	75.303	Callithrix_jacchus
ENSCING00000008967	-	99	75.303	ENSCAFG00000001075	ACO2	53	75.303	Canis_familiaris
ENSCING00000008967	-	99	75.303	ENSCAFG00020001976	ACO2	53	75.303	Canis_lupus_dingo
ENSCING00000008967	-	99	74.818	ENSCHIG00000007877	ACO2	53	74.818	Capra_hircus
ENSCING00000008967	-	99	74.818	ENSTSYG00000001084	ACO2	64	74.818	Carlito_syrichta
ENSCING00000008967	-	99	74.940	ENSCAPG00000017225	ACO2	53	74.940	Cavia_aperea
ENSCING00000008967	-	99	74.940	ENSCPOG00000012642	ACO2	53	74.940	Cavia_porcellus
ENSCING00000008967	-	99	75.545	ENSCCAG00000028378	ACO2	64	75.545	Cebus_capucinus
ENSCING00000008967	-	99	74.818	ENSCATG00000030437	ACO2	64	74.818	Cercocebus_atys
ENSCING00000008967	-	99	55.314	ENSCATG00000026864	-	66	55.314	Cercocebus_atys
ENSCING00000008967	-	99	74.940	ENSCLAG00000016998	ACO2	53	74.940	Chinchilla_lanigera
ENSCING00000008967	-	99	74.576	ENSCSAG00000005807	ACO2	53	74.576	Chlorocebus_sabaeus
ENSCING00000008967	-	99	76.029	ENSCPBG00000020545	ACO2	53	76.029	Chrysemys_picta_bellii
ENSCING00000008967	-	99	91.084	ENSCSAVG00000007584	-	99	90.842	Ciona_savignyi
ENSCING00000008967	-	99	74.818	ENSCANG00000018904	ACO2	52	74.818	Colobus_angolensis_palliatus
ENSCING00000008967	-	93	72.423	ENSCGRG00001009672	-	52	72.423	Cricetulus_griseus_chok1gshd
ENSCING00000008967	-	99	75.061	ENSCGRG00001023335	Aco2	53	75.061	Cricetulus_griseus_chok1gshd
ENSCING00000008967	-	93	72.423	ENSCGRG00000002318	-	52	72.423	Cricetulus_griseus_crigri
ENSCING00000008967	-	99	75.061	ENSCGRG00000005122	Aco2	53	75.061	Cricetulus_griseus_crigri
ENSCING00000008967	-	99	79.227	ENSCSEG00000020501	aco2	62	79.227	Cynoglossus_semilaevis
ENSCING00000008967	-	99	78.883	ENSCSEG00000006701	ACO2	53	78.883	Cynoglossus_semilaevis
ENSCING00000008967	-	99	71.256	ENSCVAG00000006081	aco2	52	71.256	Cyprinodon_variegatus
ENSCING00000008967	-	99	79.710	ENSCVAG00000010923	ACO2	55	79.710	Cyprinodon_variegatus
ENSCING00000008967	-	99	80.145	ENSDARG00000007294	aco2	52	80.145	Danio_rerio
ENSCING00000008967	-	99	75.545	ENSDNOG00000018156	ACO2	53	75.545	Dasypus_novemcinctus
ENSCING00000008967	-	99	75.422	ENSDORG00000002209	Aco2	54	75.422	Dipodomys_ordii
ENSCING00000008967	-	99	72.222	FBgn0010100	Acon	52	72.222	Drosophila_melanogaster
ENSCING00000008967	-	99	69.903	FBgn0037862	CG4706	52	69.903	Drosophila_melanogaster
ENSCING00000008967	-	99	75.728	ENSEASG00005001546	ACO2	52	75.728	Equus_asinus_asinus
ENSCING00000008967	-	99	75.728	ENSECAG00000023762	ACO2	52	75.728	Equus_caballus
ENSCING00000008967	-	99	75.243	ENSEEUG00000010201	ACO2	53	75.243	Erinaceus_europaeus
ENSCING00000008967	-	99	77.778	ENSELUG00000007787	ACO2	64	77.778	Esox_lucius
ENSCING00000008967	-	99	79.177	ENSELUG00000019769	aco2	53	79.177	Esox_lucius
ENSCING00000008967	-	99	74.757	ENSFCAG00000018526	ACO2	52	74.757	Felis_catus
ENSCING00000008967	-	99	74.699	ENSFALG00000011957	ACO2	55	74.699	Ficedula_albicollis
ENSCING00000008967	-	99	75.787	ENSFDAG00000010448	ACO2	53	75.787	Fukomys_damarensis
ENSCING00000008967	-	99	79.469	ENSFHEG00000012709	aco2	53	79.469	Fundulus_heteroclitus
ENSCING00000008967	-	99	79.952	ENSFHEG00000020556	ACO2	55	79.952	Fundulus_heteroclitus
ENSCING00000008967	-	99	76.998	ENSGMOG00000013297	aco2	53	76.998	Gadus_morhua
ENSCING00000008967	-	99	68.599	ENSGMOG00000001946	-	53	68.599	Gadus_morhua
ENSCING00000008967	-	99	74.940	ENSGALG00000011950	ACO2	53	74.940	Gallus_gallus
ENSCING00000008967	-	99	77.778	ENSGAFG00000010889	ACO2	53	77.778	Gambusia_affinis
ENSCING00000008967	-	99	78.502	ENSGAFG00000008252	aco2	64	78.502	Gambusia_affinis
ENSCING00000008967	-	99	78.125	ENSGACG00000004686	aco2	55	78.125	Gasterosteus_aculeatus
ENSCING00000008967	-	99	75.904	ENSGAGG00000017500	ACO2	55	75.904	Gopherus_agassizii
ENSCING00000008967	-	99	74.576	ENSGGOG00000001107	ACO2	53	74.576	Gorilla_gorilla
ENSCING00000008967	-	78	65.333	ENSGGOG00000037860	-	57	65.333	Gorilla_gorilla
ENSCING00000008967	-	99	78.744	ENSHBUG00000004106	aco2	53	78.744	Haplochromis_burtoni
ENSCING00000008967	-	99	75.545	ENSHGLG00000015463	Aco2	53	75.545	Heterocephalus_glaber_female
ENSCING00000008967	-	99	74.576	ENSHGLG00100010294	ACO2	53	74.576	Heterocephalus_glaber_male
ENSCING00000008967	-	99	78.986	ENSHCOG00000006890	ACO2	64	78.986	Hippocampus_comes
ENSCING00000008967	-	99	77.670	ENSHCOG00000010190	aco2	53	77.670	Hippocampus_comes
ENSCING00000008967	-	99	78.398	ENSIPUG00000001101	aco2	64	78.398	Ictalurus_punctatus
ENSCING00000008967	-	99	75.061	ENSSTOG00000016210	ACO2	53	75.061	Ictidomys_tridecemlineatus
ENSCING00000008967	-	99	79.469	ENSKMAG00000014823	ACO2	53	79.469	Kryptolebias_marmoratus
ENSCING00000008967	-	99	77.778	ENSLBEG00000002060	aco2	64	77.778	Labrus_bergylta
ENSCING00000008967	-	88	65.775	ENSLACG00000011854	ACO2	58	65.775	Latimeria_chalumnae
ENSCING00000008967	-	99	74.757	ENSLAFG00000006030	ACO2	53	74.757	Loxodonta_africana
ENSCING00000008967	-	99	74.818	ENSMFAG00000043571	ACO2	64	74.818	Macaca_fascicularis
ENSCING00000008967	-	99	55.932	ENSMFAG00000041445	-	60	55.932	Macaca_fascicularis
ENSCING00000008967	-	99	74.818	ENSMMUG00000001454	ACO2	54	74.818	Macaca_mulatta
ENSCING00000008967	-	99	74.576	ENSMNEG00000044522	ACO2	53	74.576	Macaca_nemestrina
ENSCING00000008967	-	99	74.818	ENSMLEG00000031603	ACO2	64	74.818	Mandrillus_leucophaeus
ENSCING00000008967	-	99	54.722	ENSMLEG00000042289	-	61	54.722	Mandrillus_leucophaeus
ENSCING00000008967	-	99	79.227	ENSMAMG00000007378	ACO2	55	79.227	Mastacembelus_armatus
ENSCING00000008967	-	99	77.295	ENSMAMG00000003762	aco2	64	77.295	Mastacembelus_armatus
ENSCING00000008967	-	99	78.744	ENSMZEG00005019194	aco2	62	70.531	Maylandia_zebra
ENSCING00000008967	-	99	74.940	ENSMGAG00000012110	ACO2	53	74.940	Meleagris_gallopavo
ENSCING00000008967	-	99	75.061	ENSMAUG00000007598	Aco2	53	75.061	Mesocricetus_auratus
ENSCING00000008967	-	99	64.493	ENSMICG00000013529	ACO2	50	64.493	Microcebus_murinus
ENSCING00000008967	-	99	75.303	ENSMOCG00000008387	Aco2	53	75.303	Microtus_ochrogaster
ENSCING00000008967	-	99	78.986	ENSMMOG00000002702	ACO2	53	78.986	Mola_mola
ENSCING00000008967	-	99	77.295	ENSMMOG00000003639	aco2	64	77.295	Mola_mola
ENSCING00000008967	-	99	73.976	ENSMODG00000016560	ACO2	53	73.976	Monodelphis_domestica
ENSCING00000008967	-	99	78.019	ENSMALG00000013359	ACO2	53	78.019	Monopterus_albus
ENSCING00000008967	-	99	78.208	ENSMALG00000008744	aco2	55	78.208	Monopterus_albus
ENSCING00000008967	-	99	75.545	ENSMUSG00000022477	Aco2	53	75.545	Mus_musculus
ENSCING00000008967	-	99	75.181	MGP_PahariEiJ_G0020064	Aco2	53	75.181	Mus_pahari
ENSCING00000008967	-	99	75.303	MGP_SPRETEiJ_G0020963	Aco2	53	75.303	Mus_spretus
ENSCING00000008967	-	99	74.699	ENSMPUG00000016396	ACO2	53	74.699	Mustela_putorius_furo
ENSCING00000008967	-	99	74.217	ENSMLUG00000002472	ACO2	53	74.217	Myotis_lucifugus
ENSCING00000008967	-	99	72.881	ENSNGAG00000015866	-	53	72.881	Nannospalax_galili
ENSCING00000008967	-	99	78.502	ENSNBRG00000004766	aco2	62	70.290	Neolamprologus_brichardi
ENSCING00000008967	-	99	57.627	ENSNLEG00000036269	-	64	57.627	Nomascus_leucogenys
ENSCING00000008967	-	99	75.061	ENSNLEG00000015482	ACO2	53	75.061	Nomascus_leucogenys
ENSCING00000008967	-	96	70.750	ENSMEUG00000002023	ACO2	52	70.750	Notamacropus_eugenii
ENSCING00000008967	-	99	74.940	ENSOPRG00000000365	ACO2	53	74.940	Ochotona_princeps
ENSCING00000008967	-	99	75.545	ENSODEG00000012550	ACO2	53	75.545	Octodon_degus
ENSCING00000008967	-	99	78.986	ENSONIG00000019690	aco2	50	78.986	Oreochromis_niloticus
ENSCING00000008967	-	99	71.084	ENSOANG00000003550	ACO2	53	71.084	Ornithorhynchus_anatinus
ENSCING00000008967	-	99	74.699	ENSOCUG00000021368	ACO2	52	74.699	Oryctolagus_cuniculus
ENSCING00000008967	-	99	78.795	ENSORLG00000002618	aco2	53	78.795	Oryzias_latipes
ENSCING00000008967	-	99	78.795	ENSORLG00020007394	aco2	53	78.795	Oryzias_latipes_hni
ENSCING00000008967	-	99	78.986	ENSORLG00015006146	aco2	53	78.986	Oryzias_latipes_hsok
ENSCING00000008967	-	99	78.313	ENSOMEG00000000704	aco2	53	78.313	Oryzias_melastigma
ENSCING00000008967	-	98	74.328	ENSOGAG00000002845	ACO2	55	74.328	Otolemur_garnettii
ENSCING00000008967	-	99	73.544	ENSOARG00000018307	ACO2	53	73.544	Ovis_aries
ENSCING00000008967	-	99	74.818	ENSPPAG00000019653	ACO2	53	74.818	Pan_paniscus
ENSCING00000008967	-	78	67.114	ENSPPAG00000041996	-	56	67.114	Pan_paniscus
ENSCING00000008967	-	99	74.576	ENSPPRG00000005996	ACO2	53	74.576	Panthera_pardus
ENSCING00000008967	-	99	74.576	ENSPTIG00000014744	ACO2	53	74.576	Panthera_tigris_altaica
ENSCING00000008967	-	99	74.818	ENSPTRG00000014428	ACO2	53	74.818	Pan_troglodytes
ENSCING00000008967	-	78	67.785	ENSPTRG00000048121	-	56	67.785	Pan_troglodytes
ENSCING00000008967	-	99	74.818	ENSPANG00000024107	-	64	74.818	Papio_anubis
ENSCING00000008967	-	99	61.205	ENSPKIG00000003055	ACO2	52	61.205	Paramormyrops_kingsleyae
ENSCING00000008967	-	99	77.590	ENSPKIG00000008567	aco2	64	77.590	Paramormyrops_kingsleyae
ENSCING00000008967	-	99	74.818	ENSPSIG00000007077	ACO2	53	74.818	Pelodiscus_sinensis
ENSCING00000008967	-	99	74.638	ENSPMGG00000003518	aco2	65	74.638	Periophthalmus_magnuspinnatus
ENSCING00000008967	-	99	75.545	ENSPEMG00000021158	Aco2	53	75.545	Peromyscus_maniculatus_bairdii
ENSCING00000008967	-	99	75.121	ENSPCIG00000026414	ACO2	53	75.121	Phascolarctos_cinereus
ENSCING00000008967	-	99	78.744	ENSPFOG00000016765	aco2	53	78.744	Poecilia_formosa
ENSCING00000008967	-	99	78.744	ENSPLAG00000017481	ACO2	53	78.744	Poecilia_latipinna
ENSCING00000008967	-	99	78.744	ENSPLAG00000001300	aco2	64	78.744	Poecilia_latipinna
ENSCING00000008967	-	99	78.986	ENSPMEG00000018305	ACO2	53	78.986	Poecilia_mexicana
ENSCING00000008967	-	99	78.744	ENSPMEG00000010286	aco2	64	78.744	Poecilia_mexicana
ENSCING00000008967	-	99	73.188	ENSPREG00000017594	ACO2	52	74.155	Poecilia_reticulata
ENSCING00000008967	-	99	78.502	ENSPREG00000020672	aco2	64	78.502	Poecilia_reticulata
ENSCING00000008967	-	99	75.061	ENSPPYG00000011871	ACO2	53	75.061	Pongo_abelii
ENSCING00000008967	-	99	75.243	ENSPCAG00000009742	ACO2	52	75.243	Procavia_capensis
ENSCING00000008967	-	99	75.243	ENSPCOG00000017488	ACO2	53	75.243	Propithecus_coquereli
ENSCING00000008967	-	99	75.061	ENSPVAG00000001163	ACO2	51	75.061	Pteropus_vampyrus
ENSCING00000008967	-	99	78.502	ENSPNYG00000004399	aco2	62	70.290	Pundamilia_nyererei
ENSCING00000008967	-	99	80.241	ENSPNAG00000013876	ACO2	53	80.241	Pygocentrus_nattereri
ENSCING00000008967	-	99	75.303	ENSRNOG00000024128	Aco2	53	75.303	Rattus_norvegicus
ENSCING00000008967	-	99	74.818	ENSRROG00000005066	ACO2	55	74.818	Rhinopithecus_roxellana
ENSCING00000008967	-	99	65.468	YLR304C	ACO1	54	65.468	Saccharomyces_cerevisiae
ENSCING00000008967	-	99	75.545	ENSSBOG00000029050	-	56	75.545	Saimiri_boliviensis_boliviensis
ENSCING00000008967	-	99	74.458	ENSSHAG00000010092	ACO2	53	74.458	Sarcophilus_harrisii
ENSCING00000008967	-	99	77.295	ENSSFOG00015013704	aco2	64	77.295	Scleropages_formosus
ENSCING00000008967	-	99	79.661	ENSSMAG00000005805	ACO2	51	79.661	Scophthalmus_maximus
ENSCING00000008967	-	99	78.261	ENSSMAG00000007063	aco2	64	78.261	Scophthalmus_maximus
ENSCING00000008967	-	99	78.502	ENSSDUG00000008036	aco2	64	78.502	Seriola_dumerili
ENSCING00000008967	-	99	79.227	ENSSDUG00000014898	ACO2	53	79.227	Seriola_dumerili
ENSCING00000008967	-	99	78.744	ENSSLDG00000018236	ACO2	53	78.744	Seriola_lalandi_dorsalis
ENSCING00000008967	-	99	78.502	ENSSLDG00000009538	aco2	62	78.195	Seriola_lalandi_dorsalis
ENSCING00000008967	-	99	76.570	ENSSPUG00000011600	ACO2	53	76.570	Sphenodon_punctatus
ENSCING00000008967	-	99	78.502	ENSSPAG00000017882	ACO2	55	78.502	Stegastes_partitus
ENSCING00000008967	-	99	77.427	ENSSPAG00000022958	aco2	53	77.427	Stegastes_partitus
ENSCING00000008967	-	99	75.303	ENSSSCG00000000064	ACO2	53	75.303	Sus_scrofa
ENSCING00000008967	-	99	75.181	ENSTGUG00000009907	ACO2	54	75.181	Taeniopygia_guttata
ENSCING00000008967	-	99	78.261	ENSTRUG00000017021	aco2	53	78.261	Takifugu_rubripes
ENSCING00000008967	-	99	78.986	ENSTNIG00000012938	aco2	53	78.986	Tetraodon_nigroviridis
ENSCING00000008967	-	99	74.818	ENSTBEG00000011060	ACO2	53	74.818	Tupaia_belangeri
ENSCING00000008967	-	99	69.734	ENSTTRG00000003371	ACO2	51	69.734	Tursiops_truncatus
ENSCING00000008967	-	99	75.303	ENSUAMG00000022582	ACO2	52	75.303	Ursus_americanus
ENSCING00000008967	-	99	75.181	ENSUMAG00000021024	ACO2	53	75.181	Ursus_maritimus
ENSCING00000008967	-	99	75.303	ENSVVUG00000003619	ACO2	53	75.303	Vulpes_vulpes
ENSCING00000008967	-	99	56.522	ENSXETG00000006892	aco2	52	56.522	Xenopus_tropicalis
ENSCING00000008967	-	99	74.458	ENSXCOG00000016019	ACO2	53	74.458	Xiphophorus_couchianus
ENSCING00000008967	-	99	78.744	ENSXCOG00000000374	aco2	64	78.744	Xiphophorus_couchianus
ENSCING00000008967	-	99	78.502	ENSXMAG00000006870	ACO2	53	78.502	Xiphophorus_maculatus
ENSCING00000008967	-	99	78.744	ENSXMAG00000000683	aco2	53	78.744	Xiphophorus_maculatus