EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000008990 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2388 bases
Position: chr3:5015106-5017493
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018247	MIF4G_like	PF09088.11	4.9e-36	1	1
ENSCINP00000018247	MIF4G_like_2	PF09090.11	5.5e-76	1	1
ENSCINP00000018247	MIF4G	PF02854.19	1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018247	-	2388	-	ENSCINP00000018247	795 (aa)	-	F6PKJ4

Gene Model

Click here to download ENSCING00000008990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000008990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000008990	-	99	54.362	ENSG00000136937	NCBP1	99	54.293	Homo_sapiens
ENSCING00000008990	-	99	54.156	ENSAPOG00000008002	NCBP1	99	54.156	Acanthochromis_polyacanthus
ENSCING00000008990	-	99	53.701	ENSAMEG00000004763	NCBP1	99	53.952	Ailuropoda_melanoleuca
ENSCING00000008990	-	99	53.846	ENSACIG00000000274	NCBP1	99	53.846	Amphilophus_citrinellus
ENSCING00000008990	-	99	54.282	ENSAOCG00000021148	NCBP1	99	54.282	Amphiprion_ocellaris
ENSCING00000008990	-	99	54.282	ENSAPEG00000001701	NCBP1	99	54.282	Amphiprion_percula
ENSCING00000008990	-	99	54.408	ENSATEG00000006929	NCBP1	99	54.408	Anabas_testudineus
ENSCING00000008990	-	94	53.150	ENSAPLG00000016318	NCBP1	98	52.863	Anas_platyrhynchos
ENSCING00000008990	-	99	53.152	ENSACAG00000004409	NCBP1	86	53.875	Anolis_carolinensis
ENSCING00000008990	-	97	53.197	ENSANAG00000025744	NCBP1	98	53.900	Aotus_nancymaae
ENSCING00000008990	-	99	53.778	ENSACLG00000014812	NCBP1	99	53.778	Astatotilapia_calliptera
ENSCING00000008990	-	99	54.397	ENSAMXG00000016364	NCBP1	99	54.397	Astyanax_mexicanus
ENSCING00000008990	-	99	53.856	ENSBTAG00000009732	NCBP1	98	56.135	Bos_taurus
ENSCING00000008990	-	99	33.087	WBGene00018156	ncbp-1	99	33.087	Caenorhabditis_elegans
ENSCING00000008990	-	99	54.235	ENSCJAG00000010840	NCBP1	99	56.306	Callithrix_jacchus
ENSCING00000008990	-	99	54.109	ENSCAFG00000002445	NCBP1	99	54.235	Canis_familiaris
ENSCING00000008990	-	98	54.198	ENSCAFG00020017997	NCBP1	96	56.897	Canis_lupus_dingo
ENSCING00000008990	-	99	54.235	ENSCHIG00000020139	NCBP1	99	54.362	Capra_hircus
ENSCING00000008990	-	52	55.583	ENSTSYG00000011914	NCBP1	98	57.009	Carlito_syrichta
ENSCING00000008990	-	81	48.615	ENSCAPG00000014252	NCBP1	90	48.615	Cavia_aperea
ENSCING00000008990	-	95	53.755	ENSCPOG00000012573	NCBP1	96	53.826	Cavia_porcellus
ENSCING00000008990	-	99	54.362	ENSCCAG00000032297	NCBP1	99	54.511	Cebus_capucinus
ENSCING00000008990	-	99	54.362	ENSCATG00000010052	NCBP1	99	54.293	Cercocebus_atys
ENSCING00000008990	-	99	54.235	ENSCLAG00000014339	NCBP1	99	54.488	Chinchilla_lanigera
ENSCING00000008990	-	99	54.362	ENSCSAG00000010929	NCBP1	99	54.293	Chlorocebus_sabaeus
ENSCING00000008990	-	88	52.000	ENSCHOG00000010332	NCBP1	88	53.608	Choloepus_hoffmanni
ENSCING00000008990	-	99	53.350	ENSCPBG00000024344	NCBP1	99	53.729	Chrysemys_picta_bellii
ENSCING00000008990	-	100	83.250	ENSCSAVG00000005300	-	100	86.528	Ciona_savignyi
ENSCING00000008990	-	99	54.362	ENSCANG00000036913	NCBP1	99	54.293	Colobus_angolensis_palliatus
ENSCING00000008990	-	98	53.758	ENSCGRG00001015771	Ncbp1	99	53.680	Cricetulus_griseus_chok1gshd
ENSCING00000008990	-	98	53.885	ENSCGRG00000010311	Ncbp1	99	54.013	Cricetulus_griseus_crigri
ENSCING00000008990	-	99	53.652	ENSCSEG00000012377	NCBP1	99	53.652	Cynoglossus_semilaevis
ENSCING00000008990	-	99	54.717	ENSCVAG00000008795	NCBP1	99	54.717	Cyprinodon_variegatus
ENSCING00000008990	-	99	54.235	ENSDNOG00000006885	NCBP1	99	54.488	Dasypus_novemcinctus
ENSCING00000008990	-	99	51.580	ENSDORG00000013652	Ncbp1	99	51.327	Dipodomys_ordii
ENSCING00000008990	-	99	47.323	FBgn0022942	Cbp80	99	47.323	Drosophila_melanogaster
ENSCING00000008990	-	82	32.053	FBgn0038887	CG7907	86	31.610	Drosophila_melanogaster
ENSCING00000008990	-	88	51.620	ENSETEG00000009705	NCBP1	88	51.620	Echinops_telfairi
ENSCING00000008990	-	99	55.082	ENSEBUG00000008386	NCBP1	99	55.082	Eptatretus_burgeri
ENSCING00000008990	-	99	53.856	ENSEASG00005022795	NCBP1	99	54.109	Equus_asinus_asinus
ENSCING00000008990	-	99	54.109	ENSECAG00000013847	NCBP1	99	54.235	Equus_caballus
ENSCING00000008990	-	94	51.391	ENSEEUG00000015973	NCBP1	99	51.523	Erinaceus_europaeus
ENSCING00000008990	-	99	53.585	ENSELUG00000022519	NCBP1	99	54.088	Esox_lucius
ENSCING00000008990	-	99	53.982	ENSFCAG00000001206	NCBP1	99	54.109	Felis_catus
ENSCING00000008990	-	98	54.235	ENSFALG00000001193	NCBP1	99	54.362	Ficedula_albicollis
ENSCING00000008990	-	99	54.109	ENSFDAG00000010864	NCBP1	99	54.384	Fukomys_damarensis
ENSCING00000008990	-	99	54.214	ENSFHEG00000000655	NCBP1	99	54.214	Fundulus_heteroclitus
ENSCING00000008990	-	99	53.836	ENSGMOG00000008653	NCBP1	98	53.836	Gadus_morhua
ENSCING00000008990	-	98	54.140	ENSGALG00000002087	NCBP1	99	53.827	Gallus_gallus
ENSCING00000008990	-	99	54.214	ENSGAFG00000017787	NCBP1	99	54.340	Gambusia_affinis
ENSCING00000008990	-	99	54.271	ENSGACG00000016772	NCBP1	98	54.271	Gasterosteus_aculeatus
ENSCING00000008990	-	98	54.822	ENSGAGG00000019483	NCBP1	98	55.203	Gopherus_agassizii
ENSCING00000008990	-	99	54.362	ENSGGOG00000001376	NCBP1	99	54.315	Gorilla_gorilla
ENSCING00000008990	-	99	53.778	ENSHBUG00000020843	NCBP1	99	53.778	Haplochromis_burtoni
ENSCING00000008990	-	99	54.235	ENSHGLG00000001882	NCBP1	99	54.488	Heterocephalus_glaber_female
ENSCING00000008990	-	99	47.985	ENSHGLG00000018112	-	99	47.985	Heterocephalus_glaber_female
ENSCING00000008990	-	99	47.985	ENSHGLG00100017373	-	99	47.985	Heterocephalus_glaber_male
ENSCING00000008990	-	99	54.235	ENSHGLG00100013014	NCBP1	99	54.488	Heterocephalus_glaber_male
ENSCING00000008990	-	77	50.564	ENSHCOG00000000204	NCBP1	90	50.564	Hippocampus_comes
ENSCING00000008990	-	99	54.591	ENSIPUG00000007275	ncbp1	99	54.591	Ictalurus_punctatus
ENSCING00000008990	-	99	54.109	ENSSTOG00000002695	NCBP1	99	54.235	Ictidomys_tridecemlineatus
ENSCING00000008990	-	99	54.408	ENSKMAG00000003594	NCBP1	97	57.884	Kryptolebias_marmoratus
ENSCING00000008990	-	99	53.292	ENSLBEG00000011661	NCBP1	99	53.292	Labrus_bergylta
ENSCING00000008990	-	99	49.257	ENSLACG00000013955	NCBP1	99	49.257	Latimeria_chalumnae
ENSCING00000008990	-	99	48.596	ENSLOCG00000009579	NCBP1	99	48.889	Lepisosteus_oculatus
ENSCING00000008990	-	99	53.982	ENSLAFG00000005999	NCBP1	99	54.188	Loxodonta_africana
ENSCING00000008990	-	99	54.362	ENSMFAG00000030994	NCBP1	99	54.293	Macaca_fascicularis
ENSCING00000008990	-	98	54.442	ENSMMUG00000012281	NCBP1	99	54.373	Macaca_mulatta
ENSCING00000008990	-	99	54.362	ENSMNEG00000042790	NCBP1	99	54.293	Macaca_nemestrina
ENSCING00000008990	-	99	54.362	ENSMLEG00000030374	NCBP1	99	54.293	Mandrillus_leucophaeus
ENSCING00000008990	-	99	53.526	ENSMAMG00000014806	NCBP1	99	53.544	Mastacembelus_armatus
ENSCING00000008990	-	99	53.778	ENSMZEG00005003469	NCBP1	99	53.778	Maylandia_zebra
ENSCING00000008990	-	96	54.113	ENSMZEG00005009290	-	99	54.113	Maylandia_zebra
ENSCING00000008990	-	98	53.758	ENSMAUG00000020583	Ncbp1	98	54.013	Mesocricetus_auratus
ENSCING00000008990	-	99	54.109	ENSMICG00000012682	NCBP1	99	54.235	Microcebus_murinus
ENSCING00000008990	-	98	53.758	ENSMOCG00000015818	Ncbp1	99	53.553	Microtus_ochrogaster
ENSCING00000008990	-	90	52.072	ENSMMOG00000002610	NCBP1	99	52.072	Mola_mola
ENSCING00000008990	-	99	53.485	ENSMODG00000003202	NCBP1	98	53.866	Monodelphis_domestica
ENSCING00000008990	-	99	53.607	ENSMALG00000003547	NCBP1	99	53.607	Monopterus_albus
ENSCING00000008990	-	98	53.553	MGP_CAROLIEiJ_G0025982	Ncbp1	99	53.807	Mus_caroli
ENSCING00000008990	-	98	53.553	ENSMUSG00000028330	Ncbp1	99	53.807	Mus_musculus
ENSCING00000008990	-	98	53.299	MGP_PahariEiJ_G0028318	Ncbp1	99	53.553	Mus_pahari
ENSCING00000008990	-	98	53.553	MGP_SPRETEiJ_G0026945	Ncbp1	99	53.807	Mus_spretus
ENSCING00000008990	-	99	54.109	ENSMPUG00000006399	NCBP1	99	54.362	Mustela_putorius_furo
ENSCING00000008990	-	98	54.140	ENSMLUG00000015201	NCBP1	99	54.395	Myotis_lucifugus
ENSCING00000008990	-	98	54.071	ENSNGAG00000014101	Ncbp1	99	53.739	Nannospalax_galili
ENSCING00000008990	-	73	56.306	ENSNBRG00000014674	NCBP1	93	56.306	Neolamprologus_brichardi
ENSCING00000008990	-	99	54.362	ENSNLEG00000016909	NCBP1	99	54.315	Nomascus_leucogenys
ENSCING00000008990	-	88	54.927	ENSMEUG00000010672	NCBP1	89	54.927	Notamacropus_eugenii
ENSCING00000008990	-	78	77.419	ENSOPRG00000002144	-	78	50.503	Ochotona_princeps
ENSCING00000008990	-	99	54.235	ENSODEG00000003232	NCBP1	99	54.453	Octodon_degus
ENSCING00000008990	-	99	53.778	ENSONIG00000001502	NCBP1	99	53.778	Oreochromis_niloticus
ENSCING00000008990	-	78	55.008	ENSOANG00000001918	NCBP1	99	55.008	Ornithorhynchus_anatinus
ENSCING00000008990	-	98	53.453	ENSOCUG00000013853	NCBP1	96	53.708	Oryctolagus_cuniculus
ENSCING00000008990	-	99	53.383	ENSORLG00000011008	NCBP1	99	53.634	Oryzias_latipes
ENSCING00000008990	-	99	53.759	ENSORLG00020017455	NCBP1	99	53.759	Oryzias_latipes_hni
ENSCING00000008990	-	99	53.509	ENSORLG00015012127	NCBP1	99	53.759	Oryzias_latipes_hsok
ENSCING00000008990	-	99	52.970	ENSOMEG00000020698	NCBP1	99	53.094	Oryzias_melastigma
ENSCING00000008990	-	99	53.952	ENSOGAG00000013888	NCBP1	99	54.078	Otolemur_garnettii
ENSCING00000008990	-	99	54.235	ENSOARG00000011233	NCBP1	99	54.362	Ovis_aries
ENSCING00000008990	-	99	54.362	ENSPPAG00000026462	NCBP1	99	54.293	Pan_paniscus
ENSCING00000008990	-	99	54.109	ENSPPRG00000022574	NCBP1	99	54.235	Panthera_pardus
ENSCING00000008990	-	99	54.109	ENSPTIG00000018507	NCBP1	99	54.235	Panthera_tigris_altaica
ENSCING00000008990	-	99	54.362	ENSPTRG00000021167	NCBP1	99	54.293	Pan_troglodytes
ENSCING00000008990	-	99	54.362	ENSPANG00000025591	NCBP1	99	54.293	Papio_anubis
ENSCING00000008990	-	99	55.038	ENSPKIG00000015861	NCBP1	99	55.164	Paramormyrops_kingsleyae
ENSCING00000008990	-	64	52.621	ENSPSIG00000009558	NCBP1	99	53.010	Pelodiscus_sinensis
ENSCING00000008990	-	99	53.184	ENSPMGG00000020476	NCBP1	99	53.184	Periophthalmus_magnuspinnatus
ENSCING00000008990	-	99	53.485	ENSPEMG00000020105	Ncbp1	99	53.553	Peromyscus_maniculatus_bairdii
ENSCING00000008990	-	98	51.072	ENSPMAG00000005533	NCBP1	99	50.620	Petromyzon_marinus
ENSCING00000008990	-	99	53.485	ENSPCIG00000015800	NCBP1	98	53.866	Phascolarctos_cinereus
ENSCING00000008990	-	99	54.135	ENSPFOG00000004158	NCBP1	99	54.135	Poecilia_formosa
ENSCING00000008990	-	99	54.340	ENSPLAG00000020002	NCBP1	99	54.465	Poecilia_latipinna
ENSCING00000008990	-	99	54.465	ENSPMEG00000019821	NCBP1	99	54.591	Poecilia_mexicana
ENSCING00000008990	-	99	54.020	ENSPREG00000006035	NCBP1	99	54.397	Poecilia_reticulata
ENSCING00000008990	-	99	54.362	ENSPPYG00000019426	NCBP1	99	54.293	Pongo_abelii
ENSCING00000008990	-	84	57.241	ENSPCAG00000009943	NCBP1	83	56.429	Procavia_capensis
ENSCING00000008990	-	81	55.034	ENSPCOG00000020024	NCBP1	98	55.034	Propithecus_coquereli
ENSCING00000008990	-	99	53.856	ENSPVAG00000005924	NCBP1	99	54.109	Pteropus_vampyrus
ENSCING00000008990	-	90	52.486	ENSPNYG00000002140	NCBP1	98	52.486	Pundamilia_nyererei
ENSCING00000008990	-	99	54.224	ENSPNAG00000027753	NCBP1	99	54.224	Pygocentrus_nattereri
ENSCING00000008990	-	98	53.299	ENSRNOG00000023605	Ncbp1	99	53.553	Rattus_norvegicus
ENSCING00000008990	-	99	54.362	ENSRBIG00000043175	NCBP1	99	54.453	Rhinopithecus_bieti
ENSCING00000008990	-	99	54.362	ENSRROG00000029767	NCBP1	99	54.453	Rhinopithecus_roxellana
ENSCING00000008990	-	99	54.362	ENSSBOG00000019378	NCBP1	98	56.763	Saimiri_boliviensis_boliviensis
ENSCING00000008990	-	65	52.713	ENSSHAG00000015882	NCBP1	68	53.101	Sarcophilus_harrisii
ENSCING00000008990	-	98	55.711	ENSSFOG00015001872	NCBP1	99	56.122	Scleropages_formosus
ENSCING00000008990	-	99	53.149	ENSSMAG00000007463	NCBP1	99	53.149	Scophthalmus_maximus
ENSCING00000008990	-	99	54.235	ENSSDUG00000007019	NCBP1	99	54.235	Seriola_dumerili
ENSCING00000008990	-	99	53.904	ENSSLDG00000021924	NCBP1	99	53.904	Seriola_lalandi_dorsalis
ENSCING00000008990	-	85	48.380	ENSSARG00000007274	NCBP1	86	48.812	Sorex_araneus
ENSCING00000008990	-	99	49.619	ENSSPUG00000008609	NCBP1	99	49.619	Sphenodon_punctatus
ENSCING00000008990	-	99	54.408	ENSSPAG00000012550	NCBP1	99	54.408	Stegastes_partitus
ENSCING00000008990	-	99	54.109	ENSSSCG00000005366	NCBP1	99	54.235	Sus_scrofa
ENSCING00000008990	-	99	50.756	ENSTGUG00000001472	NCBP1	99	51.134	Taeniopygia_guttata
ENSCING00000008990	-	99	53.778	ENSTRUG00000005287	NCBP1	99	53.778	Takifugu_rubripes
ENSCING00000008990	-	98	52.665	ENSTBEG00000004035	NCBP1	99	52.792	Tupaia_belangeri
ENSCING00000008990	-	87	57.071	ENSTTRG00000000507	NCBP1	87	56.566	Tursiops_truncatus
ENSCING00000008990	-	99	54.235	ENSUAMG00000005471	NCBP1	99	54.362	Ursus_americanus
ENSCING00000008990	-	97	52.264	ENSUMAG00000011865	NCBP1	99	52.926	Ursus_maritimus
ENSCING00000008990	-	99	50.822	ENSVPAG00000010537	NCBP1	99	51.075	Vicugna_pacos
ENSCING00000008990	-	99	54.109	ENSVVUG00000019725	NCBP1	99	54.235	Vulpes_vulpes
ENSCING00000008990	-	99	53.846	ENSXETG00000010179	ncbp1	99	53.720	Xenopus_tropicalis
ENSCING00000008990	-	99	54.088	ENSXMAG00000018253	NCBP1	99	54.214	Xiphophorus_maculatus