EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009010 (Gene tree)
Gene ID: 100178933
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC100178933
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1653 bases
Position: chr4:608093-609745
Accession: 100178933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018288	Ribosomal_L10	PF00466.20	5.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018288	-	795	XM_002130160	ENSCINP00000018288	244 (aa)	XP_002130196	F6PHD5

Gene Model

Click here to download ENSCING00000009010's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009010	-	80	30.303	ENSAMEG00000004722	MRPL10	75	30.303	Ailuropoda_melanoleuca
ENSCING00000009010	-	80	31.000	ENSCAFG00000016800	MRPL10	75	30.303	Canis_familiaris
ENSCING00000009010	-	80	31.000	ENSCAFG00020023232	MRPL10	75	30.303	Canis_lupus_dingo
ENSCING00000009010	-	60	31.081	ENSETEG00000007979	-	98	31.081	Echinops_telfairi
ENSCING00000009010	-	54	30.147	ENSEEUG00000003993	MRPL10	77	30.645	Erinaceus_europaeus
ENSCING00000009010	-	80	30.303	ENSFCAG00000009360	MRPL10	75	30.303	Felis_catus
ENSCING00000009010	-	82	30.882	ENSGMOG00000003023	mrpl10	88	30.882	Gadus_morhua
ENSCING00000009010	-	67	30.488	ENSGAFG00000012789	mrpl10	61	30.488	Gambusia_affinis
ENSCING00000009010	-	66	31.288	ENSMPUG00000015278	MRPL10	62	31.288	Mustela_putorius_furo
ENSCING00000009010	-	66	30.061	ENSOPRG00000003949	MRPL10	87	30.061	Ochotona_princeps
ENSCING00000009010	-	80	30.303	ENSOGAG00000006173	MRPL10	75	30.303	Otolemur_garnettii
ENSCING00000009010	-	80	30.303	ENSPPRG00000001188	MRPL10	75	30.303	Panthera_pardus
ENSCING00000009010	-	66	30.247	ENSPFOG00000018077	mrpl10	63	30.247	Poecilia_formosa
ENSCING00000009010	-	66	30.864	ENSPLAG00000021066	mrpl10	63	30.864	Poecilia_latipinna
ENSCING00000009010	-	66	30.247	ENSPMEG00000022090	mrpl10	63	30.247	Poecilia_mexicana
ENSCING00000009010	-	65	30.000	ENSPREG00000012907	mrpl10	75	30.000	Poecilia_reticulata
ENSCING00000009010	-	80	30.500	ENSPVAG00000004251	MRPL10	81	30.500	Pteropus_vampyrus
ENSCING00000009010	-	54	31.618	ENSSARG00000001586	MRPL10	77	32.258	Sorex_araneus
ENSCING00000009010	-	66	30.061	ENSSSCG00000017519	MRPL10	62	30.061	Sus_scrofa
ENSCING00000009010	-	65	30.625	ENSTRUG00000020176	mrpl10	63	30.625	Takifugu_rubripes
ENSCING00000009010	-	66	30.061	ENSUAMG00000017142	MRPL10	75	30.000	Ursus_americanus
ENSCING00000009010	-	66	30.675	ENSUMAG00000016024	MRPL10	75	30.500	Ursus_maritimus
ENSCING00000009010	-	80	31.000	ENSVVUG00000003141	MRPL10	75	30.303	Vulpes_vulpes
ENSCING00000009010	-	71	30.460	ENSXCOG00000003647	mrpl10	64	30.864	Xiphophorus_couchianus