EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009048 (Gene tree)
Gene ID: 100178443
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6820 bases
Position: chr3:4623228-4630047
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018370	SART-1	PF03343.13	4.4e-139	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018370	-	2441	-	ENSCINP00000018370	802 (aa)	-	F6R6C4

Gene Model

Click here to download ENSCING00000009048's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009048	-	82	39.024	ENSG00000175467	SART1	85	38.561	Homo_sapiens
ENSCING00000009048	-	82	38.737	ENSANAG00000037219	SART1	99	35.094	Aotus_nancymaae
ENSCING00000009048	-	81	38.484	ENSBTAG00000003094	SART1	99	35.053	Bos_taurus
ENSCING00000009048	-	60	38.418	WBGene00017605	F19F10.9	82	33.824	Caenorhabditis_elegans
ENSCING00000009048	-	82	38.881	ENSCJAG00000001741	SART1	99	35.211	Callithrix_jacchus
ENSCING00000009048	-	81	38.164	ENSCAFG00000013103	SART1	85	37.660	Canis_familiaris
ENSCING00000009048	-	81	38.307	ENSCAFG00020015337	SART1	85	37.803	Canis_lupus_dingo
ENSCING00000009048	-	89	37.337	ENSCHIG00000016364	SART1	99	34.701	Capra_hircus
ENSCING00000009048	-	62	52.381	ENSTSYG00000029994	SART1	73	52.381	Carlito_syrichta
ENSCING00000009048	-	80	38.881	ENSCAPG00000016369	SART1	95	37.683	Cavia_aperea
ENSCING00000009048	-	82	39.038	ENSCPOG00000020882	SART1	98	38.054	Cavia_porcellus
ENSCING00000009048	-	82	39.168	ENSCCAG00000037852	SART1	99	35.329	Cebus_capucinus
ENSCING00000009048	-	82	38.473	ENSCATG00000032953	SART1	69	62.857	Cercocebus_atys
ENSCING00000009048	-	82	39.485	ENSCLAG00000016593	SART1	99	35.012	Chinchilla_lanigera
ENSCING00000009048	-	82	39.000	ENSCSAG00000008081	SART1	85	38.993	Chlorocebus_sabaeus
ENSCING00000009048	-	81	38.913	ENSCPBG00000023434	SART1	94	36.364	Chrysemys_picta_bellii
ENSCING00000009048	-	98	64.865	ENSCSAVG00000009337	-	100	64.423	Ciona_savignyi
ENSCING00000009048	-	73	36.480	ENSCANG00000043164	SART1	81	36.218	Colobus_angolensis_palliatus
ENSCING00000009048	-	82	38.920	ENSCGRG00001021367	Sart1	99	35.246	Cricetulus_griseus_chok1gshd
ENSCING00000009048	-	82	38.604	ENSCGRG00000015292	Sart1	95	38.000	Cricetulus_griseus_crigri
ENSCING00000009048	-	82	39.689	ENSCVAG00000009800	SART1	87	39.773	Cyprinodon_variegatus
ENSCING00000009048	-	82	38.728	ENSDORG00000011887	Sart1	88	37.536	Dipodomys_ordii
ENSCING00000009048	-	83	35.425	FBgn0032388	CG6686	84	34.507	Drosophila_melanogaster
ENSCING00000009048	-	54	38.487	ENSEBUG00000006203	SART1	76	38.816	Eptatretus_burgeri
ENSCING00000009048	-	82	38.714	ENSEASG00005004465	SART1	99	34.854	Equus_asinus_asinus
ENSCING00000009048	-	82	38.834	ENSECAG00000023491	TSGA10IP	92	34.895	Equus_caballus
ENSCING00000009048	-	82	39.067	ENSFCAG00000013278	SART1	99	35.422	Felis_catus
ENSCING00000009048	-	82	39.112	ENSFDAG00000008891	SART1	87	38.329	Fukomys_damarensis
ENSCING00000009048	-	82	40.170	ENSGAFG00000013919	SART1	87	40.028	Gambusia_affinis
ENSCING00000009048	-	82	40.517	ENSGACG00000016951	SART1	87	39.943	Gasterosteus_aculeatus
ENSCING00000009048	-	81	39.000	ENSGAGG00000022783	SART1	94	36.496	Gopherus_agassizii
ENSCING00000009048	-	82	39.168	ENSGGOG00000009457	SART1	69	62.857	Gorilla_gorilla
ENSCING00000009048	-	82	39.712	ENSHGLG00000015022	SART1	99	35.225	Heterocephalus_glaber_female
ENSCING00000009048	-	82	39.884	ENSHGLG00100018346	SART1	99	35.266	Heterocephalus_glaber_male
ENSCING00000009048	-	82	40.256	ENSHCOG00000007259	SART1	86	39.972	Hippocampus_comes
ENSCING00000009048	-	82	39.143	ENSIPUG00000021117	sart1	99	36.493	Ictalurus_punctatus
ENSCING00000009048	-	82	38.937	ENSSTOG00000023375	SART1	85	38.329	Ictidomys_tridecemlineatus
ENSCING00000009048	-	82	39.914	ENSJJAG00000019103	Sart1	99	35.537	Jaculus_jaculus
ENSCING00000009048	-	75	37.461	ENSLACG00000011165	SART1	96	37.461	Latimeria_chalumnae
ENSCING00000009048	-	55	37.815	ENSLOCG00000001871	SART1	93	36.667	Lepisosteus_oculatus
ENSCING00000009048	-	82	38.968	ENSLAFG00000001768	SART1	99	34.701	Loxodonta_africana
ENSCING00000009048	-	82	38.473	ENSMFAG00000002484	SART1	69	62.857	Macaca_fascicularis
ENSCING00000009048	-	82	38.473	ENSMNEG00000035507	SART1	69	62.857	Macaca_nemestrina
ENSCING00000009048	-	82	38.362	ENSMLEG00000036259	SART1	93	38.473	Mandrillus_leucophaeus
ENSCING00000009048	-	82	39.255	ENSMAUG00000016274	Sart1	99	35.377	Mesocricetus_auratus
ENSCING00000009048	-	82	38.319	ENSMICG00000030096	SART1	99	34.818	Microcebus_murinus
ENSCING00000009048	-	82	39.342	ENSMOCG00000019815	Sart1	99	35.377	Microtus_ochrogaster
ENSCING00000009048	-	82	40.202	ENSMMOG00000004019	SART1	90	39.424	Mola_mola
ENSCING00000009048	-	66	39.719	ENSMODG00000009047	SART1	72	38.743	Monodelphis_domestica
ENSCING00000009048	-	89	38.331	MGP_CAROLIEiJ_G0022545	Sart1	99	35.597	Mus_caroli
ENSCING00000009048	-	81	39.429	ENSMUSG00000039148	Sart1	99	35.714	Mus_musculus
ENSCING00000009048	-	89	37.949	MGP_PahariEiJ_G0014042	Sart1	99	35.480	Mus_pahari
ENSCING00000009048	-	81	39.429	MGP_SPRETEiJ_G0023459	Sart1	99	35.714	Mus_spretus
ENSCING00000009048	-	82	38.516	ENSMPUG00000011394	SART1	85	38.000	Mustela_putorius_furo
ENSCING00000009048	-	82	38.834	ENSMLUG00000011078	SART1	99	35.363	Myotis_lucifugus
ENSCING00000009048	-	82	39.062	ENSNGAG00000004727	Sart1	88	37.660	Nannospalax_galili
ENSCING00000009048	-	78	38.009	ENSNLEG00000005961	SART1	66	62.857	Nomascus_leucogenys
ENSCING00000009048	-	78	36.460	ENSMEUG00000004918	SART1	80	36.486	Notamacropus_eugenii
ENSCING00000009048	-	82	39.628	ENSODEG00000017777	SART1	99	35.053	Octodon_degus
ENSCING00000009048	-	82	40.085	ENSONIG00000021283	SART1	99	36.385	Oreochromis_niloticus
ENSCING00000009048	-	82	39.398	ENSORLG00000028400	SART1	87	38.968	Oryzias_latipes
ENSCING00000009048	-	82	39.914	ENSORLG00020014721	SART1	87	38.539	Oryzias_latipes_hni
ENSCING00000009048	-	82	39.193	ENSORLG00015014467	SART1	87	38.705	Oryzias_latipes_hsok
ENSCING00000009048	-	82	38.825	ENSOMEG00000002508	SART1	99	35.680	Oryzias_melastigma
ENSCING00000009048	-	89	37.080	ENSOGAG00000016523	SART1	85	38.218	Otolemur_garnettii
ENSCING00000009048	-	74	42.143	ENSOARG00000000694	SART1	84	42.143	Ovis_aries
ENSCING00000009048	-	82	39.515	ENSPPAG00000030167	SART1	69	62.857	Pan_paniscus
ENSCING00000009048	-	82	39.067	ENSPPRG00000015794	SART1	99	35.422	Panthera_pardus
ENSCING00000009048	-	74	34.628	ENSPTIG00000017833	SART1	96	34.098	Panthera_tigris_altaica
ENSCING00000009048	-	82	39.515	ENSPTRG00000003905	SART1	69	62.857	Pan_troglodytes
ENSCING00000009048	-	82	38.473	ENSPANG00000023502	SART1	68	62.857	Papio_anubis
ENSCING00000009048	-	82	37.887	ENSPSIG00000002712	SART1	76	42.025	Pelodiscus_sinensis
ENSCING00000009048	-	83	38.687	ENSPEMG00000012166	Sart1	92	37.762	Peromyscus_maniculatus_bairdii
ENSCING00000009048	-	82	38.723	ENSPCIG00000008311	SART1	84	38.778	Phascolarctos_cinereus
ENSCING00000009048	-	82	39.571	ENSPFOG00000019883	SART1	87	40.028	Poecilia_formosa
ENSCING00000009048	-	82	39.571	ENSPLAG00000019633	SART1	87	40.028	Poecilia_latipinna
ENSCING00000009048	-	82	40.725	ENSPREG00000000100	SART1	87	40.525	Poecilia_reticulata
ENSCING00000009048	-	78	37.744	ENSPPYG00000003039	SART1	84	37.387	Pongo_abelii
ENSCING00000009048	-	82	38.649	ENSPCOG00000008448	SART1	85	38.617	Propithecus_coquereli
ENSCING00000009048	-	82	36.364	ENSPVAG00000016969	SART1	99	33.059	Pteropus_vampyrus
ENSCING00000009048	-	82	40.085	ENSPNYG00000014765	SART1	99	36.385	Pundamilia_nyererei
ENSCING00000009048	-	81	38.810	ENSRNOG00000020475	Sart1	99	35.673	Rattus_norvegicus
ENSCING00000009048	-	82	38.849	ENSRBIG00000044079	SART1	68	62.857	Rhinopithecus_bieti
ENSCING00000009048	-	82	38.849	ENSRROG00000045251	SART1	68	62.857	Rhinopithecus_roxellana
ENSCING00000009048	-	82	39.168	ENSSBOG00000023102	SART1	99	35.308	Saimiri_boliviensis_boliviensis
ENSCING00000009048	-	81	39.971	ENSSHAG00000011437	SART1	88	38.976	Sarcophilus_harrisii
ENSCING00000009048	-	75	38.473	ENSSFOG00015018792	SART1	83	37.405	Scleropages_formosus
ENSCING00000009048	-	82	40.374	ENSSDUG00000019131	SART1	91	40.086	Seriola_dumerili
ENSCING00000009048	-	78	42.593	ENSSPUG00000009399	SART1	77	42.813	Sphenodon_punctatus
ENSCING00000009048	-	82	39.914	ENSSPAG00000013156	SART1	99	36.667	Stegastes_partitus
ENSCING00000009048	-	82	40.746	ENSTRUG00000025047	SART1	99	37.050	Takifugu_rubripes
ENSCING00000009048	-	78	35.542	ENSTBEG00000002397	-	85	35.758	Tupaia_belangeri
ENSCING00000009048	-	89	36.316	ENSTTRG00000008751	SART1	99	33.412	Tursiops_truncatus
ENSCING00000009048	-	78	38.485	ENSUAMG00000020770	SART1	85	37.500	Ursus_americanus
ENSCING00000009048	-	68	38.821	ENSUMAG00000010903	SART1	89	37.955	Ursus_maritimus
ENSCING00000009048	-	81	38.307	ENSVVUG00000027041	SART1	99	34.895	Vulpes_vulpes
ENSCING00000009048	-	82	40.890	ENSXETG00000011429	sart1	87	41.159	Xenopus_tropicalis
ENSCING00000009048	-	82	38.755	ENSXCOG00000005296	SART1	87	39.463	Xiphophorus_couchianus