EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009130 (Gene tree)
Gene ID: 100185430
Gene Symbol: -
Alias: -
Full Name: glutamine--tRNA ligase-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6544 bases
Position: chr2:5786010-5792553
Accession: 100185430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018528	tRNA-synt_1c_C	PF03950.18	2.3e-46	1	1
ENSCINP00000018528	tRNA_synt_1c_R2	PF04557.15	1.3e-28	1	1
ENSCINP00000018528	tRNA_synt_1c_R1	PF04558.15	2.2e-48	1	1
ENSCINP00000018528	tRNA-synt_1c	PF00749.21	5.5e-108	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018528	-	2462	XM_002131066	ENSCINP00000018528	772 (aa)	XP_002131102	F6S399

Gene Model

Click here to download ENSCING00000009130's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00970	Aminoacyl-tRNA biosynthesis	KEGG
cin01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009130	-	99	51.023	WBGene00001336	qars-1	100	58.007	Caenorhabditis_elegans
ENSCING00000009130	-	99	80.494	ENSCSAVG00000006819	-	100	80.491	Ciona_savignyi
ENSCING00000009130	-	99	54.884	FBgn0027090	GlnRS	99	55.013	Drosophila_melanogaster
ENSCING00000009130	-	99	40.438	YOR168W	GLN4	99	40.438	Saccharomyces_cerevisiae