EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009139 (Gene tree)
Gene ID: 100185433
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1914 bases
Position: chr2:5657601-5659514
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018564	DEAD	PF00270.29	3.9e-07	1	1
ENSCINP00000018564	HA2	PF04408.23	5.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018564	-	1914	-	ENSCINP00000018564	637 (aa)	-	F7BBN7

Gene Model

Click here to download ENSCING00000009139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009139	-	100	55.730	ENSG00000005100	DHX33	92	55.810	Homo_sapiens
ENSCING00000009139	-	99	58.136	ENSAPOG00000010132	dhx33	93	58.136	Acanthochromis_polyacanthus
ENSCING00000009139	-	98	55.151	ENSAMEG00000006026	DHX33	93	55.151	Ailuropoda_melanoleuca
ENSCING00000009139	-	99	57.662	ENSACIG00000012591	dhx33	93	57.662	Amphilophus_citrinellus
ENSCING00000009139	-	99	57.504	ENSAOCG00000007008	dhx33	93	57.504	Amphiprion_ocellaris
ENSCING00000009139	-	99	54.560	ENSAPEG00000013599	dhx33	93	54.560	Amphiprion_percula
ENSCING00000009139	-	99	57.820	ENSATEG00000005019	dhx33	93	57.820	Anabas_testudineus
ENSCING00000009139	-	95	58.882	ENSAPLG00000015593	DHX33	99	58.882	Anas_platyrhynchos
ENSCING00000009139	-	99	55.696	ENSACAG00000015095	DHX33	94	55.696	Anolis_carolinensis
ENSCING00000009139	-	100	56.044	ENSANAG00000037748	DHX33	94	56.044	Aotus_nancymaae
ENSCING00000009139	-	99	57.820	ENSACLG00000025610	dhx33	93	57.820	Astatotilapia_calliptera
ENSCING00000009139	-	100	57.614	ENSAMXG00000015875	dhx33	82	57.614	Astyanax_mexicanus
ENSCING00000009139	-	100	55.416	ENSBTAG00000032083	DHX33	90	55.416	Bos_taurus
ENSCING00000009139	-	97	41.248	WBGene00020263	let-355	77	41.248	Caenorhabditis_elegans
ENSCING00000009139	-	100	56.358	ENSCJAG00000011321	DHX33	90	56.358	Callithrix_jacchus
ENSCING00000009139	-	96	57.283	ENSCAFG00000015535	DHX33	99	57.283	Canis_familiaris
ENSCING00000009139	-	100	56.044	ENSCAFG00020016360	DHX33	94	55.730	Canis_lupus_dingo
ENSCING00000009139	-	100	55.259	ENSCHIG00000014722	DHX33	91	55.259	Capra_hircus
ENSCING00000009139	-	100	56.201	ENSTSYG00000005995	DHX33	90	56.201	Carlito_syrichta
ENSCING00000009139	-	96	57.213	ENSCAPG00000009660	DHX33	96	57.213	Cavia_aperea
ENSCING00000009139	-	99	56.309	ENSCPOG00000003681	DHX33	92	56.309	Cavia_porcellus
ENSCING00000009139	-	100	55.887	ENSCCAG00000027955	DHX33	90	55.887	Cebus_capucinus
ENSCING00000009139	-	100	56.044	ENSCATG00000029157	DHX33	90	56.044	Cercocebus_atys
ENSCING00000009139	-	100	56.358	ENSCLAG00000014171	DHX33	89	56.358	Chinchilla_lanigera
ENSCING00000009139	-	100	49.309	ENSCSAG00000012784	DHX33	84	49.309	Chlorocebus_sabaeus
ENSCING00000009139	-	88	72.414	ENSCHOG00000008707	DHX33	79	72.414	Choloepus_hoffmanni
ENSCING00000009139	-	100	57.300	ENSCPBG00000027741	DHX33	94	57.300	Chrysemys_picta_bellii
ENSCING00000009139	-	100	56.044	ENSCANG00000034385	DHX33	90	56.044	Colobus_angolensis_palliatus
ENSCING00000009139	-	100	56.986	ENSCGRG00001023101	Dhx33	91	56.986	Cricetulus_griseus_chok1gshd
ENSCING00000009139	-	94	58.124	ENSCGRG00000010329	Dhx33	99	58.124	Cricetulus_griseus_crigri
ENSCING00000009139	-	99	58.044	ENSCSEG00000011017	dhx33	93	58.044	Cynoglossus_semilaevis
ENSCING00000009139	-	99	58.517	ENSCVAG00000008998	dhx33	93	58.517	Cyprinodon_variegatus
ENSCING00000009139	-	99	56.171	ENSDARG00000051785	dhx33	93	56.171	Danio_rerio
ENSCING00000009139	-	100	56.672	ENSDNOG00000016865	DHX33	83	56.672	Dasypus_novemcinctus
ENSCING00000009139	-	54	60.280	ENSDORG00000014344	Dhx33	85	60.280	Dipodomys_ordii
ENSCING00000009139	-	98	46.955	FBgn0032194	CG4901	89	46.955	Drosophila_melanogaster
ENSCING00000009139	-	98	38.519	ENSEBUG00000008342	dhx33	95	38.519	Eptatretus_burgeri
ENSCING00000009139	-	100	56.515	ENSEASG00005015338	DHX33	93	56.515	Equus_asinus_asinus
ENSCING00000009139	-	100	56.358	ENSECAG00000010272	DHX33	90	56.358	Equus_caballus
ENSCING00000009139	-	65	68.421	ENSEEUG00000008589	-	59	68.421	Erinaceus_europaeus
ENSCING00000009139	-	100	58.399	ENSELUG00000020257	dhx33	94	58.399	Esox_lucius
ENSCING00000009139	-	100	55.573	ENSFCAG00000014755	DHX33	91	55.573	Felis_catus
ENSCING00000009139	-	98	58.054	ENSFALG00000009785	DHX33	92	58.054	Ficedula_albicollis
ENSCING00000009139	-	100	54.945	ENSFDAG00000003334	DHX33	92	54.945	Fukomys_damarensis
ENSCING00000009139	-	88	54.833	ENSFHEG00000014253	dhx33	90	54.833	Fundulus_heteroclitus
ENSCING00000009139	-	99	57.528	ENSGMOG00000012350	dhx33	93	57.528	Gadus_morhua
ENSCING00000009139	-	99	57.820	ENSGAFG00000014811	dhx33	95	58.649	Gambusia_affinis
ENSCING00000009139	-	99	58.294	ENSGACG00000020229	dhx33	93	58.294	Gasterosteus_aculeatus
ENSCING00000009139	-	100	57.300	ENSGAGG00000013448	DHX33	97	57.300	Gopherus_agassizii
ENSCING00000009139	-	100	55.416	ENSGGOG00000002748	DHX33	90	55.416	Gorilla_gorilla
ENSCING00000009139	-	99	57.662	ENSHBUG00000017415	dhx33	93	57.662	Haplochromis_burtoni
ENSCING00000009139	-	100	56.201	ENSHGLG00000014753	DHX33	93	56.201	Heterocephalus_glaber_female
ENSCING00000009139	-	100	56.201	ENSHGLG00100012963	DHX33	96	56.201	Heterocephalus_glaber_male
ENSCING00000009139	-	99	57.886	ENSHCOG00000011161	dhx33	93	57.886	Hippocampus_comes
ENSCING00000009139	-	99	57.820	ENSIPUG00000011594	dhx33	93	57.820	Ictalurus_punctatus
ENSCING00000009139	-	100	57.143	ENSSTOG00000003298	DHX33	91	57.143	Ictidomys_tridecemlineatus
ENSCING00000009139	-	100	56.672	ENSJJAG00000016626	Dhx33	91	56.672	Jaculus_jaculus
ENSCING00000009139	-	99	58.095	ENSKMAG00000013595	dhx33	92	58.095	Kryptolebias_marmoratus
ENSCING00000009139	-	99	57.098	ENSLBEG00000005703	dhx33	93	57.098	Labrus_bergylta
ENSCING00000009139	-	99	59.084	ENSLACG00000018174	DHX33	93	59.084	Latimeria_chalumnae
ENSCING00000009139	-	87	48.381	ENSLOCG00000002764	dhx33	96	48.381	Lepisosteus_oculatus
ENSCING00000009139	-	100	56.515	ENSLAFG00000007136	DHX33	92	56.515	Loxodonta_africana
ENSCING00000009139	-	100	56.201	ENSMFAG00000042578	DHX33	90	56.201	Macaca_fascicularis
ENSCING00000009139	-	100	56.201	ENSMMUG00000006594	DHX33	90	56.201	Macaca_mulatta
ENSCING00000009139	-	100	49.296	ENSMNEG00000034809	DHX33	90	49.296	Macaca_nemestrina
ENSCING00000009139	-	100	56.201	ENSMLEG00000034236	DHX33	90	56.201	Mandrillus_leucophaeus
ENSCING00000009139	-	99	56.872	ENSMAMG00000005936	dhx33	93	56.872	Mastacembelus_armatus
ENSCING00000009139	-	99	57.820	ENSMZEG00005023292	dhx33	93	57.820	Maylandia_zebra
ENSCING00000009139	-	96	59.121	ENSMGAG00000003125	DHX33	99	59.121	Meleagris_gallopavo
ENSCING00000009139	-	100	57.143	ENSMAUG00000011100	Dhx33	91	57.143	Mesocricetus_auratus
ENSCING00000009139	-	100	55.730	ENSMICG00000012715	DHX33	90	55.730	Microcebus_murinus
ENSCING00000009139	-	100	56.986	ENSMOCG00000016069	Dhx33	91	56.986	Microtus_ochrogaster
ENSCING00000009139	-	96	58.497	ENSMMOG00000005732	dhx33	90	58.497	Mola_mola
ENSCING00000009139	-	99	55.591	ENSMODG00000016649	DHX33	93	55.591	Monodelphis_domestica
ENSCING00000009139	-	99	57.662	ENSMALG00000000923	dhx33	93	57.662	Monopterus_albus
ENSCING00000009139	-	100	57.143	MGP_CAROLIEiJ_G0016657	Dhx33	91	57.143	Mus_caroli
ENSCING00000009139	-	100	57.300	ENSMUSG00000040620	Dhx33	91	57.300	Mus_musculus
ENSCING00000009139	-	100	57.300	MGP_PahariEiJ_G0017788	Dhx33	91	57.300	Mus_pahari
ENSCING00000009139	-	100	57.300	MGP_SPRETEiJ_G0017493	Dhx33	91	57.300	Mus_spretus
ENSCING00000009139	-	84	56.554	ENSMPUG00000011250	DHX33	99	56.554	Mustela_putorius_furo
ENSCING00000009139	-	100	56.515	ENSMLUG00000014439	DHX33	83	56.515	Myotis_lucifugus
ENSCING00000009139	-	100	56.672	ENSNGAG00000017139	Dhx33	91	56.672	Nannospalax_galili
ENSCING00000009139	-	99	57.346	ENSNBRG00000017674	dhx33	93	57.346	Neolamprologus_brichardi
ENSCING00000009139	-	63	52.475	ENSNLEG00000009098	-	99	52.475	Nomascus_leucogenys
ENSCING00000009139	-	81	55.491	ENSMEUG00000009202	DHX33	93	55.491	Notamacropus_eugenii
ENSCING00000009139	-	100	56.672	ENSOPRG00000013163	DHX33	91	56.672	Ochotona_princeps
ENSCING00000009139	-	100	56.829	ENSODEG00000017026	DHX33	91	56.829	Octodon_degus
ENSCING00000009139	-	99	57.978	ENSONIG00000017480	dhx33	89	57.978	Oreochromis_niloticus
ENSCING00000009139	-	61	45.980	ENSOANG00000002808	-	100	45.980	Ornithorhynchus_anatinus
ENSCING00000009139	-	65	45.045	ENSOANG00000000524	-	100	45.045	Ornithorhynchus_anatinus
ENSCING00000009139	-	99	57.188	ENSOCUG00000004805	DHX33	89	57.188	Oryctolagus_cuniculus
ENSCING00000009139	-	99	57.504	ENSORLG00000011817	dhx33	93	57.504	Oryzias_latipes
ENSCING00000009139	-	99	57.504	ENSORLG00020016766	dhx33	93	57.504	Oryzias_latipes_hni
ENSCING00000009139	-	99	57.978	ENSORLG00015022753	dhx33	97	57.978	Oryzias_latipes_hsok
ENSCING00000009139	-	99	58.136	ENSOMEG00000010438	dhx33	93	58.136	Oryzias_melastigma
ENSCING00000009139	-	99	55.660	ENSOGAG00000001611	DHX33	83	55.660	Otolemur_garnettii
ENSCING00000009139	-	100	54.930	ENSOARG00000003235	DHX33	92	54.930	Ovis_aries
ENSCING00000009139	-	100	55.573	ENSPPAG00000038926	DHX33	90	55.573	Pan_paniscus
ENSCING00000009139	-	100	55.102	ENSPPRG00000009202	DHX33	91	55.102	Panthera_pardus
ENSCING00000009139	-	75	48.233	ENSPTIG00000018141	DHX33	85	47.817	Panthera_tigris_altaica
ENSCING00000009139	-	100	55.573	ENSPTRG00000008632	DHX33	90	55.573	Pan_troglodytes
ENSCING00000009139	-	100	56.201	ENSPANG00000024297	DHX33	90	56.201	Papio_anubis
ENSCING00000009139	-	100	57.143	ENSPKIG00000017401	dhx33	94	57.143	Paramormyrops_kingsleyae
ENSCING00000009139	-	96	58.101	ENSPSIG00000006293	DHX33	93	58.101	Pelodiscus_sinensis
ENSCING00000009139	-	99	57.820	ENSPMGG00000013896	dhx33	93	57.820	Periophthalmus_magnuspinnatus
ENSCING00000009139	-	100	56.515	ENSPEMG00000016472	Dhx33	91	56.515	Peromyscus_maniculatus_bairdii
ENSCING00000009139	-	99	54.961	ENSPCIG00000020074	DHX33	93	54.961	Phascolarctos_cinereus
ENSCING00000009139	-	99	57.820	ENSPFOG00000009426	dhx33	93	57.820	Poecilia_formosa
ENSCING00000009139	-	99	57.820	ENSPLAG00000017730	dhx33	93	57.820	Poecilia_latipinna
ENSCING00000009139	-	99	57.504	ENSPMEG00000012075	dhx33	98	58.429	Poecilia_mexicana
ENSCING00000009139	-	99	57.886	ENSPREG00000008239	dhx33	93	57.886	Poecilia_reticulata
ENSCING00000009139	-	100	55.730	ENSPPYG00000007871	DHX33	83	55.730	Pongo_abelii
ENSCING00000009139	-	100	50.863	ENSPCAG00000006190	DHX33	90	50.863	Procavia_capensis
ENSCING00000009139	-	100	56.201	ENSPCOG00000007524	DHX33	90	56.201	Propithecus_coquereli
ENSCING00000009139	-	100	56.358	ENSPVAG00000002467	DHX33	90	56.358	Pteropus_vampyrus
ENSCING00000009139	-	99	57.820	ENSPNYG00000021648	dhx33	93	57.820	Pundamilia_nyererei
ENSCING00000009139	-	99	57.571	ENSPNAG00000020048	dhx33	93	57.571	Pygocentrus_nattereri
ENSCING00000009139	-	100	56.515	ENSRNOG00000007054	Dhx33	91	56.515	Rattus_norvegicus
ENSCING00000009139	-	100	55.887	ENSRBIG00000040087	DHX33	96	56.933	Rhinopithecus_bieti
ENSCING00000009139	-	100	56.044	ENSRROG00000038052	DHX33	90	56.044	Rhinopithecus_roxellana
ENSCING00000009139	-	98	37.690	YKL078W	-	87	37.366	Saccharomyces_cerevisiae
ENSCING00000009139	-	100	56.201	ENSSBOG00000020529	DHX33	92	56.201	Saimiri_boliviensis_boliviensis
ENSCING00000009139	-	96	55.646	ENSSHAG00000002762	DHX33	99	55.556	Sarcophilus_harrisii
ENSCING00000009139	-	99	57.862	ENSSFOG00015001783	dhx33	93	58.136	Scleropages_formosus
ENSCING00000009139	-	99	57.662	ENSSMAG00000000497	dhx33	93	57.662	Scophthalmus_maximus
ENSCING00000009139	-	99	56.872	ENSSDUG00000017798	dhx33	93	56.872	Seriola_dumerili
ENSCING00000009139	-	99	56.556	ENSSLDG00000020132	dhx33	93	56.556	Seriola_lalandi_dorsalis
ENSCING00000009139	-	100	55.573	ENSSARG00000009813	DHX33	92	55.573	Sorex_araneus
ENSCING00000009139	-	63	54.208	ENSSPUG00000010498	-	99	54.208	Sphenodon_punctatus
ENSCING00000009139	-	99	57.662	ENSSPAG00000012860	dhx33	93	57.662	Stegastes_partitus
ENSCING00000009139	-	64	56.479	ENSSPAG00000003711	-	99	56.479	Stegastes_partitus
ENSCING00000009139	-	100	54.788	ENSSSCG00000039064	DHX33	91	54.788	Sus_scrofa
ENSCING00000009139	-	99	58.202	ENSTGUG00000004226	DHX33	99	58.202	Taeniopygia_guttata
ENSCING00000009139	-	99	56.782	ENSTRUG00000003395	dhx33	93	56.782	Takifugu_rubripes
ENSCING00000009139	-	99	51.567	ENSTNIG00000008546	dhx33	93	51.567	Tetraodon_nigroviridis
ENSCING00000009139	-	80	53.635	ENSTTRG00000014788	DHX33	84	53.635	Tursiops_truncatus
ENSCING00000009139	-	100	55.887	ENSUAMG00000012182	DHX33	91	55.887	Ursus_americanus
ENSCING00000009139	-	100	55.887	ENSVVUG00000027336	DHX33	95	55.887	Vulpes_vulpes
ENSCING00000009139	-	99	57.886	ENSXETG00000009173	dhx33	91	57.886	Xenopus_tropicalis
ENSCING00000009139	-	99	58.294	ENSXCOG00000004969	dhx33	93	58.294	Xiphophorus_couchianus
ENSCING00000009139	-	99	58.136	ENSXMAG00000005679	dhx33	93	58.136	Xiphophorus_maculatus