EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009208 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 12493 bases
Position: chr5:4673337-4685829
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018719	ResIII	PF04851.15	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018719	-	3715	-	ENSCINP00000018719	1067 (aa)	-	F6WNB2

Gene Model

Click here to download ENSCING00000009208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009208	-	97	50.746	ENSG00000164080	RAD54L2	71	54.448	Homo_sapiens
ENSCING00000009208	-	95	50.565	ENSAPOG00000024141	-	69	50.383	Acanthochromis_polyacanthus
ENSCING00000009208	-	97	50.748	ENSAMEG00000009326	RAD54L2	69	52.473	Ailuropoda_melanoleuca
ENSCING00000009208	-	85	53.568	ENSACIG00000015932	-	73	50.392	Amphilophus_citrinellus
ENSCING00000009208	-	99	49.550	ENSACIG00000018079	rad54l2	72	50.823	Amphilophus_citrinellus
ENSCING00000009208	-	99	49.682	ENSAOCG00000022380	-	70	51.122	Amphiprion_ocellaris
ENSCING00000009208	-	93	50.715	ENSATEG00000009346	rad54l2	73	50.839	Anabas_testudineus
ENSCING00000009208	-	95	50.708	ENSATEG00000006641	-	68	50.621	Anabas_testudineus
ENSCING00000009208	-	96	50.606	ENSAPLG00000002121	RAD54L2	74	51.401	Anas_platyrhynchos
ENSCING00000009208	-	96	49.813	ENSACAG00000015883	RAD54L2	77	50.626	Anolis_carolinensis
ENSCING00000009208	-	97	50.606	ENSANAG00000025396	RAD54L2	72	50.884	Aotus_nancymaae
ENSCING00000009208	-	93	50.774	ENSACLG00000019111	rad54l2	76	51.556	Astatotilapia_calliptera
ENSCING00000009208	-	87	52.328	ENSACLG00000018296	-	69	50.285	Astatotilapia_calliptera
ENSCING00000009208	-	93	51.076	ENSAMXG00000013807	rad54l2	72	50.932	Astyanax_mexicanus
ENSCING00000009208	-	97	51.024	ENSBTAG00000032253	RAD54L2	75	50.455	Bos_taurus
ENSCING00000009208	-	64	48.662	WBGene00007761	rad-26	84	36.423	Caenorhabditis_elegans
ENSCING00000009208	-	97	50.792	ENSCJAG00000005575	RAD54L2	76	51.070	Callithrix_jacchus
ENSCING00000009208	-	97	50.748	ENSCAFG00000010120	RAD54L2	69	52.519	Canis_familiaris
ENSCING00000009208	-	97	50.748	ENSCAFG00020022320	RAD54L2	69	52.519	Canis_lupus_dingo
ENSCING00000009208	-	97	50.977	ENSCHIG00000008830	RAD54L2	70	51.597	Capra_hircus
ENSCING00000009208	-	98	49.817	ENSTSYG00000013200	RAD54L2	74	49.819	Carlito_syrichta
ENSCING00000009208	-	83	48.111	ENSCAPG00000016465	RAD54L2	63	48.917	Cavia_aperea
ENSCING00000009208	-	97	50.887	ENSCPOG00000005941	RAD54L2	69	52.376	Cavia_porcellus
ENSCING00000009208	-	77	54.320	ENSCCAG00000024465	RAD54L2	73	50.792	Cebus_capucinus
ENSCING00000009208	-	97	50.699	ENSCATG00000039891	RAD54L2	70	52.326	Cercocebus_atys
ENSCING00000009208	-	97	50.559	ENSCLAG00000008059	RAD54L2	69	52.330	Chinchilla_lanigera
ENSCING00000009208	-	97	50.745	ENSCSAG00000014027	RAD54L2	69	52.372	Chlorocebus_sabaeus
ENSCING00000009208	-	96	50.280	ENSCPBG00000016624	RAD54L2	71	50.867	Chrysemys_picta_bellii
ENSCING00000009208	-	97	50.745	ENSCANG00000036093	RAD54L2	70	52.372	Colobus_angolensis_palliatus
ENSCING00000009208	-	97	51.215	ENSCGRG00000007921	Rad54l2	74	50.499	Cricetulus_griseus_crigri
ENSCING00000009208	-	99	48.577	ENSCSEG00000001740	rad54l2	67	50.238	Cynoglossus_semilaevis
ENSCING00000009208	-	95	50.611	ENSCSEG00000006115	-	78	50.718	Cynoglossus_semilaevis
ENSCING00000009208	-	95	50.095	ENSCVAG00000005376	-	71	50.443	Cyprinodon_variegatus
ENSCING00000009208	-	93	51.478	ENSCVAG00000017887	rad54l2	75	48.509	Cyprinodon_variegatus
ENSCING00000009208	-	99	49.776	ENSDARG00000063031	rad54l2	75	48.808	Danio_rerio
ENSCING00000009208	-	97	50.791	ENSDNOG00000017359	RAD54L2	71	52.224	Dasypus_novemcinctus
ENSCING00000009208	-	86	51.724	ENSDORG00000000651	Rad54l2	71	51.432	Dipodomys_ordii
ENSCING00000009208	-	74	47.818	FBgn0034976	CG4049	50	47.133	Drosophila_melanogaster
ENSCING00000009208	-	93	52.178	ENSETEG00000013290	RAD54L2	75	52.464	Echinops_telfairi
ENSCING00000009208	-	95	48.970	ENSEBUG00000001591	rad54l2	74	51.771	Eptatretus_burgeri
ENSCING00000009208	-	97	50.840	ENSEASG00005012868	RAD54L2	69	52.570	Equus_asinus_asinus
ENSCING00000009208	-	97	50.746	ENSECAG00000014759	RAD54L2	73	50.274	Equus_caballus
ENSCING00000009208	-	77	52.124	ENSEEUG00000001759	RAD54L2	51	63.061	Erinaceus_europaeus
ENSCING00000009208	-	95	51.492	ENSELUG00000011246	RAD54L2	72	51.613	Esox_lucius
ENSCING00000009208	-	97	50.841	ENSFCAG00000018563	RAD54L2	69	52.570	Felis_catus
ENSCING00000009208	-	99	49.201	ENSFALG00000008938	RAD54L2	83	49.014	Ficedula_albicollis
ENSCING00000009208	-	97	51.074	ENSFDAG00000017084	RAD54L2	69	52.570	Fukomys_damarensis
ENSCING00000009208	-	95	49.953	ENSFHEG00000017845	-	68	49.952	Fundulus_heteroclitus
ENSCING00000009208	-	99	48.670	ENSFHEG00000023241	rad54l2	75	50.000	Fundulus_heteroclitus
ENSCING00000009208	-	93	51.375	ENSGMOG00000010674	rad54l2	77	51.333	Gadus_morhua
ENSCING00000009208	-	99	49.326	ENSGALG00000003243	RAD54L2	74	48.695	Gallus_gallus
ENSCING00000009208	-	95	50.000	ENSGAFG00000002396	-	70	50.337	Gambusia_affinis
ENSCING00000009208	-	93	51.260	ENSGAFG00000021535	rad54l2	72	50.875	Gambusia_affinis
ENSCING00000009208	-	95	50.429	ENSGACG00000005642	-	79	50.483	Gasterosteus_aculeatus
ENSCING00000009208	-	93	52.315	ENSGACG00000001558	rad54l2	74	52.315	Gasterosteus_aculeatus
ENSCING00000009208	-	95	51.767	ENSGAGG00000020971	RAD54L2	76	51.058	Gopherus_agassizii
ENSCING00000009208	-	100	49.464	ENSGGOG00000010032	RAD54L2	74	50.365	Gorilla_gorilla
ENSCING00000009208	-	87	52.381	ENSHBUG00000018930	-	69	50.095	Haplochromis_burtoni
ENSCING00000009208	-	93	50.774	ENSHBUG00000012480	rad54l2	75	51.315	Haplochromis_burtoni
ENSCING00000009208	-	97	50.887	ENSHGLG00000012116	RAD54L2	69	52.376	Heterocephalus_glaber_female
ENSCING00000009208	-	97	50.887	ENSHGLG00100007205	RAD54L2	69	52.376	Heterocephalus_glaber_male
ENSCING00000009208	-	95	49.859	ENSHCOG00000006741	-	70	50.287	Hippocampus_comes
ENSCING00000009208	-	94	52.095	ENSHCOG00000007601	rad54l2	66	52.478	Hippocampus_comes
ENSCING00000009208	-	95	48.485	ENSIPUG00000024973	-	74	48.112	Ictalurus_punctatus
ENSCING00000009208	-	97	50.700	ENSSTOG00000010014	RAD54L2	69	52.229	Ictidomys_tridecemlineatus
ENSCING00000009208	-	97	51.070	ENSJJAG00000014332	Rad54l2	74	50.407	Jaculus_jaculus
ENSCING00000009208	-	99	47.911	ENSKMAG00000002931	-	69	50.380	Kryptolebias_marmoratus
ENSCING00000009208	-	93	50.753	ENSKMAG00000001976	rad54l2	74	50.521	Kryptolebias_marmoratus
ENSCING00000009208	-	93	51.203	ENSLBEG00000018779	rad54l2	73	50.929	Labrus_bergylta
ENSCING00000009208	-	85	52.766	ENSLBEG00000008534	-	71	52.615	Labrus_bergylta
ENSCING00000009208	-	95	46.081	ENSLACG00000016004	RAD54L2	71	46.500	Latimeria_chalumnae
ENSCING00000009208	-	92	50.540	ENSLOCG00000014222	rad54l2	93	51.564	Lepisosteus_oculatus
ENSCING00000009208	-	97	50.653	ENSLAFG00000005966	RAD54L2	74	50.226	Loxodonta_africana
ENSCING00000009208	-	97	50.606	ENSMFAG00000041836	RAD54L2	70	52.372	Macaca_fascicularis
ENSCING00000009208	-	97	50.653	ENSMMUG00000012002	RAD54L2	69	52.279	Macaca_mulatta
ENSCING00000009208	-	97	50.745	ENSMNEG00000035063	RAD54L2	70	52.372	Macaca_nemestrina
ENSCING00000009208	-	97	50.745	ENSMLEG00000034668	RAD54L2	70	52.372	Mandrillus_leucophaeus
ENSCING00000009208	-	93	51.562	ENSMAMG00000015321	-	73	50.865	Mastacembelus_armatus
ENSCING00000009208	-	93	50.775	ENSMAMG00000023761	rad54l2	72	50.826	Mastacembelus_armatus
ENSCING00000009208	-	87	52.701	ENSMZEG00005021308	-	69	50.380	Maylandia_zebra
ENSCING00000009208	-	93	50.771	ENSMZEG00005012584	rad54l2	74	49.862	Maylandia_zebra
ENSCING00000009208	-	99	48.791	ENSMGAG00000002911	RAD54L2	74	48.646	Meleagris_gallopavo
ENSCING00000009208	-	96	49.860	ENSMAUG00000011651	Rad54l2	97	50.046	Mesocricetus_auratus
ENSCING00000009208	-	97	50.980	ENSMICG00000002777	RAD54L2	70	52.713	Microcebus_murinus
ENSCING00000009208	-	97	51.402	ENSMOCG00000022448	Rad54l2	75	50.775	Microtus_ochrogaster
ENSCING00000009208	-	87	51.987	ENSMMOG00000016901	-	73	49.707	Mola_mola
ENSCING00000009208	-	99	48.812	ENSMMOG00000021709	rad54l2	76	48.488	Mola_mola
ENSCING00000009208	-	93	51.880	ENSMODG00000011850	RAD54L2	73	51.841	Monodelphis_domestica
ENSCING00000009208	-	86	53.142	ENSMALG00000015084	-	88	50.530	Monopterus_albus
ENSCING00000009208	-	97	51.076	MGP_CAROLIEiJ_G0032634	Rad54l2	69	52.524	Mus_caroli
ENSCING00000009208	-	97	51.076	ENSMUSG00000040661	Rad54l2	69	52.524	Mus_musculus
ENSCING00000009208	-	97	50.982	MGP_PahariEiJ_G0015502	Rad54l2	69	52.524	Mus_pahari
ENSCING00000009208	-	97	51.076	MGP_SPRETEiJ_G0033779	Rad54l2	69	52.524	Mus_spretus
ENSCING00000009208	-	97	50.654	ENSMPUG00000011865	RAD54L2	69	52.376	Mustela_putorius_furo
ENSCING00000009208	-	97	50.606	ENSMLUG00000004605	RAD54L2	69	52.128	Myotis_lucifugus
ENSCING00000009208	-	97	51.215	ENSNGAG00000015629	Rad54l2	73	50.502	Nannospalax_galili
ENSCING00000009208	-	87	52.381	ENSNBRG00000022847	-	69	50.095	Neolamprologus_brichardi
ENSCING00000009208	-	93	50.864	ENSNBRG00000001937	rad54l2	74	51.498	Neolamprologus_brichardi
ENSCING00000009208	-	97	50.746	ENSNLEG00000007038	RAD54L2	73	51.024	Nomascus_leucogenys
ENSCING00000009208	-	87	54.935	ENSMEUG00000009835	RAD54L2	69	54.481	Notamacropus_eugenii
ENSCING00000009208	-	97	50.887	ENSODEG00000018266	RAD54L2	69	52.376	Octodon_degus
ENSCING00000009208	-	93	50.719	ENSONIG00000014468	rad54l2	73	49.863	Oreochromis_niloticus
ENSCING00000009208	-	87	53.216	ENSONIG00000001663	-	71	50.918	Oreochromis_niloticus
ENSCING00000009208	-	96	51.268	ENSOANG00000012793	RAD54L2	73	50.895	Ornithorhynchus_anatinus
ENSCING00000009208	-	97	51.256	ENSOCUG00000017577	RAD54L2	69	52.565	Oryctolagus_cuniculus
ENSCING00000009208	-	93	51.635	ENSORLG00000002276	rad54l2	71	51.302	Oryzias_latipes
ENSCING00000009208	-	98	50.000	ENSORLG00000002714	-	69	51.107	Oryzias_latipes
ENSCING00000009208	-	96	49.537	ENSORLG00020003470	rad54l2	70	51.070	Oryzias_latipes_hni
ENSCING00000009208	-	95	50.849	ENSORLG00020019256	-	69	50.719	Oryzias_latipes_hni
ENSCING00000009208	-	95	51.134	ENSORLG00015013408	-	69	50.960	Oryzias_latipes_hsok
ENSCING00000009208	-	96	50.658	ENSORLG00015021530	rad54l2	71	51.498	Oryzias_latipes_hsok
ENSCING00000009208	-	97	49.188	ENSOMEG00000005597	rad54l2	68	50.571	Oryzias_melastigma
ENSCING00000009208	-	99	49.150	ENSOMEG00000008216	-	71	50.763	Oryzias_melastigma
ENSCING00000009208	-	75	54.710	ENSOGAG00000012442	RAD54L2	70	54.710	Otolemur_garnettii
ENSCING00000009208	-	97	50.977	ENSOARG00000007264	RAD54L2	69	52.473	Ovis_aries
ENSCING00000009208	-	97	50.840	ENSPPAG00000038472	RAD54L2	73	51.117	Pan_paniscus
ENSCING00000009208	-	97	50.841	ENSPPRG00000010212	RAD54L2	69	52.570	Panthera_pardus
ENSCING00000009208	-	97	50.841	ENSPTIG00000002240	RAD54L2	69	52.570	Panthera_tigris_altaica
ENSCING00000009208	-	97	50.840	ENSPTRG00000014974	RAD54L2	73	51.117	Pan_troglodytes
ENSCING00000009208	-	97	50.745	ENSPANG00000000857	RAD54L2	70	52.372	Papio_anubis
ENSCING00000009208	-	95	50.759	ENSPKIG00000001065	rad54l2	71	50.821	Paramormyrops_kingsleyae
ENSCING00000009208	-	92	49.903	ENSPSIG00000014346	RAD54L2	89	50.757	Pelodiscus_sinensis
ENSCING00000009208	-	82	54.857	ENSPMGG00000002208	rad54l2	71	54.696	Periophthalmus_magnuspinnatus
ENSCING00000009208	-	95	48.804	ENSPMGG00000000641	-	73	48.259	Periophthalmus_magnuspinnatus
ENSCING00000009208	-	97	51.356	ENSPEMG00000012051	Rad54l2	74	50.635	Peromyscus_maniculatus_bairdii
ENSCING00000009208	-	58	55.763	ENSPMAG00000001636	rad54l2	100	55.919	Petromyzon_marinus
ENSCING00000009208	-	89	53.030	ENSPCIG00000018143	RAD54L2	69	54.390	Phascolarctos_cinereus
ENSCING00000009208	-	95	50.141	ENSPFOG00000000197	-	69	50.575	Poecilia_formosa
ENSCING00000009208	-	97	49.863	ENSPFOG00000018644	rad54l2	71	49.310	Poecilia_formosa
ENSCING00000009208	-	95	50.188	ENSPLAG00000013908	-	70	50.621	Poecilia_latipinna
ENSCING00000009208	-	97	50.000	ENSPLAG00000006015	rad54l2	74	48.523	Poecilia_latipinna
ENSCING00000009208	-	97	50.324	ENSPMEG00000021535	rad54l2	75	50.185	Poecilia_mexicana
ENSCING00000009208	-	95	50.047	ENSPMEG00000009878	-	70	50.384	Poecilia_mexicana
ENSCING00000009208	-	93	50.725	ENSPREG00000008628	rad54l2	74	50.436	Poecilia_reticulata
ENSCING00000009208	-	95	49.859	ENSPREG00000013377	RAD54L2	69	50.288	Poecilia_reticulata
ENSCING00000009208	-	97	50.653	ENSPPYG00000013831	RAD54L2	74	50.931	Pongo_abelii
ENSCING00000009208	-	80	44.747	ENSPCAG00000011952	RAD54L2	64	44.747	Procavia_capensis
ENSCING00000009208	-	97	51.076	ENSPCOG00000015983	RAD54L2	69	52.478	Propithecus_coquereli
ENSCING00000009208	-	87	52.280	ENSPNYG00000011435	-	69	50.000	Pundamilia_nyererei
ENSCING00000009208	-	93	51.660	ENSPNYG00000020693	rad54l2	76	51.616	Pundamilia_nyererei
ENSCING00000009208	-	95	50.000	ENSPNAG00000011583	-	72	50.049	Pygocentrus_nattereri
ENSCING00000009208	-	93	51.761	ENSPNAG00000006451	rad54l2	74	50.047	Pygocentrus_nattereri
ENSCING00000009208	-	97	49.347	ENSRNOG00000013570	Rad54l2	74	48.688	Rattus_norvegicus
ENSCING00000009208	-	94	50.331	ENSRNOG00000049489	LOC102552166	97	50.330	Rattus_norvegicus
ENSCING00000009208	-	97	50.745	ENSRBIG00000032434	RAD54L2	82	50.181	Rhinopithecus_bieti
ENSCING00000009208	-	97	50.745	ENSRROG00000042309	RAD54L2	73	51.022	Rhinopithecus_roxellana
ENSCING00000009208	-	97	50.699	ENSSBOG00000002139	RAD54L2	69	52.326	Saimiri_boliviensis_boliviensis
ENSCING00000009208	-	95	51.705	ENSSHAG00000008604	RAD54L2	70	51.647	Sarcophilus_harrisii
ENSCING00000009208	-	95	50.902	ENSSFOG00015019014	rad54l2	71	51.016	Scleropages_formosus
ENSCING00000009208	-	93	49.618	ENSSMAG00000020933	rad54l2	69	49.324	Scophthalmus_maximus
ENSCING00000009208	-	95	49.436	ENSSMAG00000009978	-	69	49.524	Scophthalmus_maximus
ENSCING00000009208	-	93	50.676	ENSSDUG00000014268	rad54l2	73	50.629	Seriola_dumerili
ENSCING00000009208	-	95	49.953	ENSSDUG00000016711	-	69	49.952	Seriola_dumerili
ENSCING00000009208	-	93	50.771	ENSSLDG00000023959	rad54l2	74	50.725	Seriola_lalandi_dorsalis
ENSCING00000009208	-	95	50.718	ENSSLDG00000023388	-	71	50.973	Seriola_lalandi_dorsalis
ENSCING00000009208	-	93	50.581	ENSSPAG00000016532	rad54l2	71	50.534	Stegastes_partitus
ENSCING00000009208	-	87	53.347	ENSSPAG00000006371	-	73	50.952	Stegastes_partitus
ENSCING00000009208	-	97	50.654	ENSSSCG00000011425	RAD54L2	69	52.376	Sus_scrofa
ENSCING00000009208	-	96	50.748	ENSTGUG00000004888	RAD54L2	69	51.647	Taeniopygia_guttata
ENSCING00000009208	-	87	53.038	ENSTRUG00000011066	-	70	50.576	Takifugu_rubripes
ENSCING00000009208	-	93	50.097	ENSTRUG00000013962	rad54l2	72	49.172	Takifugu_rubripes
ENSCING00000009208	-	82	54.485	ENSTNIG00000006049	-	91	50.777	Tetraodon_nigroviridis
ENSCING00000009208	-	93	49.856	ENSTNIG00000014694	rad54l2	88	49.952	Tetraodon_nigroviridis
ENSCING00000009208	-	87	53.466	ENSTBEG00000003377	RAD54L2	73	53.813	Tupaia_belangeri
ENSCING00000009208	-	97	50.748	ENSUAMG00000020891	RAD54L2	74	52.473	Ursus_americanus
ENSCING00000009208	-	97	50.748	ENSUMAG00000021678	RAD54L2	78	51.925	Ursus_maritimus
ENSCING00000009208	-	97	50.748	ENSVVUG00000026874	RAD54L2	71	52.473	Vulpes_vulpes
ENSCING00000009208	-	96	50.372	ENSXETG00000000070	rad54l2	74	50.817	Xenopus_tropicalis
ENSCING00000009208	-	97	48.756	ENSXCOG00000004961	rad54l2	74	48.474	Xiphophorus_couchianus
ENSCING00000009208	-	94	50.292	ENSXCOG00000002848	-	72	50.495	Xiphophorus_couchianus
ENSCING00000009208	-	96	49.392	ENSXMAG00000019370	-	69	50.096	Xiphophorus_maculatus
ENSCING00000009208	-	93	51.406	ENSXMAG00000017182	rad54l2	75	51.022	Xiphophorus_maculatus