EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009272 (Gene tree)
Gene ID: 100181091
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2972 bases
Position: chr5:3149140-3152111
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018842	ResIII	PF04851.15	6.5e-10	1	1
ENSCINP00000018842	DEAD	PF00270.29	2.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018842	-	2002	-	ENSCINP00000018842	622 (aa)	-	F6S0X0

Gene Model

Click here to download ENSCING00000009272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009272	-	92	46.949	ENSG00000125485	DDX31	78	46.610	Homo_sapiens
ENSCING00000009272	-	99	43.222	ENSAPOG00000004212	ddx31	84	43.354	Acanthochromis_polyacanthus
ENSCING00000009272	-	98	44.745	ENSAMEG00000004120	DDX31	82	44.745	Ailuropoda_melanoleuca
ENSCING00000009272	-	77	44.990	ENSACIG00000006033	ddx31	88	42.032	Amphilophus_citrinellus
ENSCING00000009272	-	60	45.767	ENSAOCG00000023183	ddx31	70	45.767	Amphiprion_ocellaris
ENSCING00000009272	-	98	43.910	ENSATEG00000015522	ddx31	80	43.956	Anabas_testudineus
ENSCING00000009272	-	91	44.521	ENSAPLG00000016396	DDX31	89	41.981	Anas_platyrhynchos
ENSCING00000009272	-	91	46.346	ENSANAG00000035120	DDX31	82	46.346	Aotus_nancymaae
ENSCING00000009272	-	98	41.357	ENSACLG00000008720	ddx31	98	40.412	Astatotilapia_calliptera
ENSCING00000009272	-	87	41.198	ENSAMXG00000009673	ddx31	80	41.198	Astyanax_mexicanus
ENSCING00000009272	-	98	42.880	ENSBTAG00000003530	DDX31	84	42.880	Bos_taurus
ENSCING00000009272	-	92	45.854	ENSCJAG00000018173	DDX31	84	45.857	Callithrix_jacchus
ENSCING00000009272	-	95	44.754	ENSCAFG00020024548	DDX31	85	44.754	Canis_lupus_dingo
ENSCING00000009272	-	98	42.720	ENSCHIG00000020011	DDX31	81	42.720	Capra_hircus
ENSCING00000009272	-	87	46.154	ENSTSYG00000009182	DDX31	75	46.154	Carlito_syrichta
ENSCING00000009272	-	90	44.810	ENSCAPG00000015227	DDX31	80	44.810	Cavia_aperea
ENSCING00000009272	-	98	44.160	ENSCPOG00000014243	DDX31	81	44.160	Cavia_porcellus
ENSCING00000009272	-	92	46.024	ENSCCAG00000025989	DDX31	78	46.024	Cebus_capucinus
ENSCING00000009272	-	92	44.710	ENSCATG00000038462	DDX31	77	44.710	Cercocebus_atys
ENSCING00000009272	-	91	46.528	ENSCLAG00000008431	DDX31	84	46.528	Chinchilla_lanigera
ENSCING00000009272	-	92	46.610	ENSCSAG00000014953	DDX31	78	46.610	Chlorocebus_sabaeus
ENSCING00000009272	-	98	42.516	ENSCHOG00000001526	DDX31	82	42.516	Choloepus_hoffmanni
ENSCING00000009272	-	84	43.043	ENSCPBG00000021215	DDX31	94	43.068	Chrysemys_picta_bellii
ENSCING00000009272	-	84	75.619	ENSCSAVG00000004227	-	99	75.619	Ciona_savignyi
ENSCING00000009272	-	92	46.939	ENSCANG00000036241	DDX31	78	47.680	Colobus_angolensis_palliatus
ENSCING00000009272	-	87	47.731	ENSCGRG00001014191	Ddx31	76	47.731	Cricetulus_griseus_chok1gshd
ENSCING00000009272	-	87	47.731	ENSCGRG00000008396	Ddx31	76	47.731	Cricetulus_griseus_crigri
ENSCING00000009272	-	98	41.909	ENSCSEG00000008541	ddx31	81	41.746	Cynoglossus_semilaevis
ENSCING00000009272	-	89	42.832	ENSCVAG00000000189	ddx31	97	41.280	Cyprinodon_variegatus
ENSCING00000009272	-	87	43.248	ENSDARG00000035507	ddx31	82	40.571	Danio_rerio
ENSCING00000009272	-	87	47.415	ENSDNOG00000009865	DDX31	77	47.415	Dasypus_novemcinctus
ENSCING00000009272	-	99	43.150	ENSDORG00000005071	Ddx31	88	43.150	Dipodomys_ordii
ENSCING00000009272	-	83	40.429	FBgn0027602	CG8611	61	38.996	Drosophila_melanogaster
ENSCING00000009272	-	91	40.204	ENSETEG00000007908	DDX31	74	40.444	Echinops_telfairi
ENSCING00000009272	-	70	37.826	ENSEBUG00000014723	-	96	37.826	Eptatretus_burgeri
ENSCING00000009272	-	98	45.136	ENSEASG00005009845	DDX31	81	45.136	Equus_asinus_asinus
ENSCING00000009272	-	87	47.491	ENSECAG00000005146	DDX31	75	47.491	Equus_caballus
ENSCING00000009272	-	98	43.291	ENSEEUG00000012785	DDX31	79	43.291	Erinaceus_europaeus
ENSCING00000009272	-	87	44.545	ENSELUG00000001052	ddx31	73	44.545	Esox_lucius
ENSCING00000009272	-	98	41.786	ENSFCAG00000007106	DDX31	83	41.786	Felis_catus
ENSCING00000009272	-	87	45.324	ENSFALG00000001468	DDX31	88	42.925	Ficedula_albicollis
ENSCING00000009272	-	87	46.942	ENSFDAG00000007853	DDX31	80	46.942	Fukomys_damarensis
ENSCING00000009272	-	87	44.241	ENSFHEG00000009047	ddx31	83	41.046	Fundulus_heteroclitus
ENSCING00000009272	-	64	48.058	ENSGALG00000041473	DDX31	83	48.058	Gallus_gallus
ENSCING00000009272	-	87	43.119	ENSGAFG00000009888	ddx31	75	43.119	Gambusia_affinis
ENSCING00000009272	-	90	45.754	ENSGAGG00000012482	DDX31	78	45.596	Gopherus_agassizii
ENSCING00000009272	-	92	46.780	ENSGGOG00000008314	DDX31	78	43.898	Gorilla_gorilla
ENSCING00000009272	-	99	41.429	ENSHBUG00000019539	ddx31	71	41.429	Haplochromis_burtoni
ENSCING00000009272	-	87	47.482	ENSHGLG00000013194	DDX31	82	43.478	Heterocephalus_glaber_female
ENSCING00000009272	-	87	43.478	ENSHGLG00100016868	DDX31	86	43.478	Heterocephalus_glaber_male
ENSCING00000009272	-	89	43.345	ENSHCOG00000020998	ddx31	88	40.729	Hippocampus_comes
ENSCING00000009272	-	87	43.613	ENSIPUG00000020592	ddx31	84	40.221	Ictalurus_punctatus
ENSCING00000009272	-	91	42.736	ENSSTOG00000007985	DDX31	85	42.736	Ictidomys_tridecemlineatus
ENSCING00000009272	-	91	44.983	ENSJJAG00000018491	Ddx31	83	44.983	Jaculus_jaculus
ENSCING00000009272	-	77	46.436	ENSKMAG00000006165	ddx31	90	46.436	Kryptolebias_marmoratus
ENSCING00000009272	-	87	46.154	ENSLBEG00000008550	ddx31	83	42.631	Labrus_bergylta
ENSCING00000009272	-	71	44.371	ENSLACG00000008136	DDX31	82	44.371	Latimeria_chalumnae
ENSCING00000009272	-	99	42.405	ENSLOCG00000005630	ddx31	83	42.386	Lepisosteus_oculatus
ENSCING00000009272	-	98	44.000	ENSLAFG00000015379	DDX31	86	44.000	Loxodonta_africana
ENSCING00000009272	-	92	46.441	ENSMFAG00000036342	DDX31	69	46.441	Macaca_fascicularis
ENSCING00000009272	-	92	46.610	ENSMMUG00000004590	DDX31	78	46.271	Macaca_mulatta
ENSCING00000009272	-	92	46.102	ENSMNEG00000045539	DDX31	84	46.435	Macaca_nemestrina
ENSCING00000009272	-	92	46.949	ENSMLEG00000032393	DDX31	69	46.949	Mandrillus_leucophaeus
ENSCING00000009272	-	92	44.118	ENSMAMG00000019252	ddx31	87	42.857	Mastacembelus_armatus
ENSCING00000009272	-	87	42.623	ENSMZEG00005020937	ddx31	90	42.623	Maylandia_zebra
ENSCING00000009272	-	87	45.438	ENSMGAG00000006002	DDX31	79	45.196	Meleagris_gallopavo
ENSCING00000009272	-	87	46.642	ENSMAUG00000016824	Ddx31	86	46.642	Mesocricetus_auratus
ENSCING00000009272	-	98	44.817	ENSMICG00000010581	DDX31	80	44.817	Microcebus_murinus
ENSCING00000009272	-	98	44.032	ENSMOCG00000020938	Ddx31	85	44.032	Microtus_ochrogaster
ENSCING00000009272	-	89	42.419	ENSMMOG00000020996	ddx31	95	42.301	Mola_mola
ENSCING00000009272	-	89	47.276	ENSMODG00000012555	DDX31	77	47.276	Monodelphis_domestica
ENSCING00000009272	-	98	42.215	ENSMALG00000002614	ddx31	83	42.271	Monopterus_albus
ENSCING00000009272	-	87	47.378	MGP_CAROLIEiJ_G0023360	Ddx31	79	47.378	Mus_caroli
ENSCING00000009272	-	87	47.368	ENSMUSG00000026806	Ddx31	79	47.368	Mus_musculus
ENSCING00000009272	-	87	47.187	MGP_PahariEiJ_G0024817	Ddx31	79	47.187	Mus_pahari
ENSCING00000009272	-	87	47.368	MGP_SPRETEiJ_G0024277	Ddx31	79	47.368	Mus_spretus
ENSCING00000009272	-	98	44.960	ENSMPUG00000012522	DDX31	70	44.960	Mustela_putorius_furo
ENSCING00000009272	-	99	41.140	ENSMLUG00000011507	DDX31	83	41.385	Myotis_lucifugus
ENSCING00000009272	-	98	44.855	ENSNGAG00000020928	Ddx31	86	44.855	Nannospalax_galili
ENSCING00000009272	-	87	43.613	ENSNBRG00000024320	ddx31	98	41.472	Neolamprologus_brichardi
ENSCING00000009272	-	92	46.610	ENSNLEG00000012870	DDX31	69	46.610	Nomascus_leucogenys
ENSCING00000009272	-	87	42.523	ENSMEUG00000008760	DDX31	77	42.523	Notamacropus_eugenii
ENSCING00000009272	-	61	53.535	ENSOPRG00000004477	-	62	53.535	Ochotona_princeps
ENSCING00000009272	-	87	42.294	ENSODEG00000015685	DDX31	81	42.294	Octodon_degus
ENSCING00000009272	-	87	44.080	ENSONIG00000000711	ddx31	89	41.838	Oreochromis_niloticus
ENSCING00000009272	-	87	47.842	ENSOANG00000005047	DDX31	87	47.842	Ornithorhynchus_anatinus
ENSCING00000009272	-	89	46.749	ENSOCUG00000008739	DDX31	82	46.749	Oryctolagus_cuniculus
ENSCING00000009272	-	87	44.526	ENSORLG00000016628	ddx31	69	44.526	Oryzias_latipes
ENSCING00000009272	-	87	44.526	ENSORLG00020017897	ddx31	79	41.390	Oryzias_latipes_hni
ENSCING00000009272	-	87	45.338	ENSOMEG00000004600	ddx31	75	42.247	Oryzias_melastigma
ENSCING00000009272	-	91	46.667	ENSOGAG00000004072	DDX31	89	46.667	Otolemur_garnettii
ENSCING00000009272	-	98	42.720	ENSOARG00000005879	DDX31	84	42.720	Ovis_aries
ENSCING00000009272	-	92	46.949	ENSPPAG00000027761	DDX31	78	44.068	Pan_paniscus
ENSCING00000009272	-	92	46.949	ENSPTRG00000021500	DDX31	78	44.068	Pan_troglodytes
ENSCING00000009272	-	92	46.441	ENSPANG00000025987	DDX31	69	46.441	Papio_anubis
ENSCING00000009272	-	89	45.855	ENSPSIG00000006722	DDX31	77	45.583	Pelodiscus_sinensis
ENSCING00000009272	-	87	43.119	ENSPMGG00000020721	ddx31	81	43.119	Periophthalmus_magnuspinnatus
ENSCING00000009272	-	98	43.871	ENSPEMG00000014798	Ddx31	79	47.187	Peromyscus_maniculatus_bairdii
ENSCING00000009272	-	99	43.171	ENSPCIG00000019742	DDX31	85	43.171	Phascolarctos_cinereus
ENSCING00000009272	-	99	39.872	ENSPFOG00000000144	ddx31	85	39.872	Poecilia_formosa
ENSCING00000009272	-	63	44.784	ENSPLAG00000019817	ddx31	75	44.784	Poecilia_latipinna
ENSCING00000009272	-	99	39.872	ENSPMEG00000018263	ddx31	85	39.872	Poecilia_mexicana
ENSCING00000009272	-	99	40.351	ENSPREG00000002870	-	85	40.351	Poecilia_reticulata
ENSCING00000009272	-	92	46.441	ENSPPYG00000019713	DDX31	69	46.441	Pongo_abelii
ENSCING00000009272	-	87	42.266	ENSPCAG00000004249	DDX31	65	42.266	Procavia_capensis
ENSCING00000009272	-	98	43.381	ENSPCOG00000010431	DDX31	72	43.381	Propithecus_coquereli
ENSCING00000009272	-	87	48.022	ENSPVAG00000002050	DDX31	70	46.988	Pteropus_vampyrus
ENSCING00000009272	-	87	42.962	ENSPNYG00000013810	ddx31	88	42.962	Pundamilia_nyererei
ENSCING00000009272	-	87	44.746	ENSPNAG00000022187	ddx31	83	42.271	Pygocentrus_nattereri
ENSCING00000009272	-	100	43.444	ENSRNOG00000013040	Ddx31	88	43.444	Rattus_norvegicus
ENSCING00000009272	-	92	44.576	ENSRBIG00000042353	DDX31	69	44.576	Rhinopithecus_bieti
ENSCING00000009272	-	92	46.271	ENSRROG00000044427	DDX31	84	45.946	Rhinopithecus_roxellana
ENSCING00000009272	-	87	33.993	YKR024C	-	80	33.993	Saccharomyces_cerevisiae
ENSCING00000009272	-	92	46.102	ENSSBOG00000021668	DDX31	78	46.102	Saimiri_boliviensis_boliviensis
ENSCING00000009272	-	95	43.239	ENSSHAG00000018804	DDX31	84	43.175	Sarcophilus_harrisii
ENSCING00000009272	-	87	44.928	ENSSFOG00015012974	ddx31	73	44.928	Scleropages_formosus
ENSCING00000009272	-	98	40.931	ENSSMAG00000017673	ddx31	77	40.938	Scophthalmus_maximus
ENSCING00000009272	-	79	44.088	ENSSDUG00000011751	ddx31	93	43.130	Seriola_dumerili
ENSCING00000009272	-	72	43.172	ENSSLDG00000005425	-	91	41.348	Seriola_lalandi_dorsalis
ENSCING00000009272	-	87	47.302	ENSSPUG00000016144	DDX31	81	47.302	Sphenodon_punctatus
ENSCING00000009272	-	60	44.974	ENSSPAG00000018034	ddx31	74	45.238	Stegastes_partitus
ENSCING00000009272	-	92	46.259	ENSSSCG00000005729	DDX31	80	45.238	Sus_scrofa
ENSCING00000009272	-	99	43.150	ENSTGUG00000005142	DDX31	97	43.150	Taeniopygia_guttata
ENSCING00000009272	-	100	39.072	ENSTRUG00000013699	ddx31	87	44.389	Takifugu_rubripes
ENSCING00000009272	-	92	41.969	ENSTNIG00000006039	ddx31	92	41.969	Tetraodon_nigroviridis
ENSCING00000009272	-	80	41.779	ENSTBEG00000013672	DDX31	85	41.779	Tupaia_belangeri
ENSCING00000009272	-	87	46.667	ENSTTRG00000014093	DDX31	67	46.667	Tursiops_truncatus
ENSCING00000009272	-	99	42.790	ENSUAMG00000024811	DDX31	81	42.790	Ursus_americanus
ENSCING00000009272	-	99	42.700	ENSUMAG00000016669	DDX31	87	45.550	Ursus_maritimus
ENSCING00000009272	-	95	44.754	ENSVVUG00000028399	DDX31	85	44.754	Vulpes_vulpes
ENSCING00000009272	-	87	43.885	ENSXETG00000006258	ddx31	88	43.885	Xenopus_tropicalis
ENSCING00000009272	-	87	37.593	ENSXCOG00000018753	ddx31	99	37.593	Xiphophorus_couchianus
ENSCING00000009272	-	99	40.415	ENSXMAG00000006678	ddx31	90	40.895	Xiphophorus_maculatus