EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009276 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1317 bases
Position: chrHT000170.1:35485-36801
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018853	LUC7	PF03194.15	1.3e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018853	-	664	-	ENSCINP00000018853	179 (aa)	-	F6S0J6

Gene Model

Click here to download ENSCING00000009276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009276	-	100	62.222	ENSG00000007392	LUC7L	100	58.333	Homo_sapiens
ENSCING00000009276	-	100	63.333	ENSG00000146963	LUC7L2	61	63.889	Homo_sapiens
ENSCING00000009276	-	85	35.000	ENSG00000108848	LUC7L3	62	36.735	Homo_sapiens
ENSCING00000009276	-	100	61.111	ENSAPOG00000007158	luc7l	59	61.111	Acanthochromis_polyacanthus
ENSCING00000009276	-	100	61.111	ENSACIG00000000501	luc7l	56	61.111	Amphilophus_citrinellus
ENSCING00000009276	-	85	35.000	ENSACIG00000000544	luc7l3	64	35.000	Amphilophus_citrinellus
ENSCING00000009276	-	100	61.111	ENSAOCG00000024266	luc7l	58	61.111	Amphiprion_ocellaris
ENSCING00000009276	-	100	61.111	ENSAPEG00000005836	luc7l	58	61.111	Amphiprion_percula
ENSCING00000009276	-	100	61.111	ENSATEG00000014946	luc7l	50	61.111	Anabas_testudineus
ENSCING00000009276	-	97	48.315	ENSANAG00000034574	LUC7L	54	47.802	Aotus_nancymaae
ENSCING00000009276	-	100	63.333	ENSANAG00000024316	-	53	63.333	Aotus_nancymaae
ENSCING00000009276	-	85	35.000	ENSANAG00000030274	LUC7L3	62	36.735	Aotus_nancymaae
ENSCING00000009276	-	100	61.111	ENSACLG00000012920	luc7l	56	61.111	Astatotilapia_calliptera
ENSCING00000009276	-	100	60.000	ENSAMXG00000042216	zgc:158803	56	60.000	Astyanax_mexicanus
ENSCING00000009276	-	97	39.444	WBGene00015207	B0495.8	73	47.059	Caenorhabditis_elegans
ENSCING00000009276	-	85	35.000	ENSCJAG00000018558	LUC7L3	70	35.000	Callithrix_jacchus
ENSCING00000009276	-	100	62.222	ENSCJAG00000011674	LUC7L	55	62.222	Callithrix_jacchus
ENSCING00000009276	-	100	62.222	ENSCHIG00000017216	LUC7L	51	62.222	Capra_hircus
ENSCING00000009276	-	70	44.444	ENSCAPG00000014475	-	50	46.825	Cavia_aperea
ENSCING00000009276	-	100	63.333	ENSCPOG00000011934	-	55	63.333	Cavia_porcellus
ENSCING00000009276	-	100	62.222	ENSCCAG00000020620	LUC7L	50	62.222	Cebus_capucinus
ENSCING00000009276	-	85	35.000	ENSCCAG00000033579	LUC7L3	62	36.735	Cebus_capucinus
ENSCING00000009276	-	85	35.000	ENSCATG00000034891	LUC7L3	62	36.735	Cercocebus_atys
ENSCING00000009276	-	100	62.222	ENSCATG00000041326	LUC7L	50	62.222	Cercocebus_atys
ENSCING00000009276	-	100	63.333	ENSCLAG00000002030	-	55	63.333	Chinchilla_lanigera
ENSCING00000009276	-	100	62.222	ENSCLAG00000016174	LUC7L	95	59.722	Chinchilla_lanigera
ENSCING00000009276	-	85	35.000	ENSCANG00000028098	LUC7L3	68	35.000	Colobus_angolensis_palliatus
ENSCING00000009276	-	100	62.222	ENSCANG00000034129	LUC7L	55	62.222	Colobus_angolensis_palliatus
ENSCING00000009276	-	100	60.335	ENSCGRG00000014586	Luc7l	99	61.765	Cricetulus_griseus_crigri
ENSCING00000009276	-	82	32.680	ENSCSEG00000013074	luc7l3	69	32.680	Cynoglossus_semilaevis
ENSCING00000009276	-	100	61.667	ENSCSEG00000012535	luc7l	50	61.667	Cynoglossus_semilaevis
ENSCING00000009276	-	100	61.111	ENSCVAG00000022878	luc7l	50	61.111	Cyprinodon_variegatus
ENSCING00000009276	-	100	63.333	ENSDNOG00000037510	-	54	63.333	Dasypus_novemcinctus
ENSCING00000009276	-	100	63.889	ENSDORG00000029146	Luc7l2	55	63.889	Dipodomys_ordii
ENSCING00000009276	-	100	62.222	ENSECAG00000000792	LUC7L	51	61.111	Equus_caballus
ENSCING00000009276	-	100	58.889	ENSELUG00000009242	luc7l	60	58.889	Esox_lucius
ENSCING00000009276	-	85	35.000	ENSFCAG00000012343	LUC7L3	69	37.037	Felis_catus
ENSCING00000009276	-	100	62.222	ENSFDAG00000000168	LUC7L	99	61.765	Fukomys_damarensis
ENSCING00000009276	-	97	57.386	ENSFDAG00000018900	-	52	60.127	Fukomys_damarensis
ENSCING00000009276	-	100	60.556	ENSFHEG00000022662	luc7l	52	59.477	Fundulus_heteroclitus
ENSCING00000009276	-	100	60.773	ENSGMOG00000002988	luc7l	52	60.773	Gadus_morhua
ENSCING00000009276	-	100	62.222	ENSGALG00000037983	LUC7L	54	62.222	Gallus_gallus
ENSCING00000009276	-	100	60.556	ENSGAFG00000020591	luc7l	50	60.556	Gambusia_affinis
ENSCING00000009276	-	100	59.563	ENSGACG00000008627	luc7l	56	56.771	Gasterosteus_aculeatus
ENSCING00000009276	-	85	35.000	ENSGGOG00000024399	LUC7L3	62	36.735	Gorilla_gorilla
ENSCING00000009276	-	100	62.222	ENSGGOG00000016488	LUC7L	55	62.222	Gorilla_gorilla
ENSCING00000009276	-	100	61.111	ENSHBUG00000004615	luc7l	52	61.111	Haplochromis_burtoni
ENSCING00000009276	-	100	63.333	ENSHGLG00000004646	-	55	63.333	Heterocephalus_glaber_female
ENSCING00000009276	-	92	54.545	ENSHCOG00000016391	zgc:158803	61	54.545	Hippocampus_comes
ENSCING00000009276	-	100	61.667	ENSIPUG00000004442	luc7l	53	61.667	Ictalurus_punctatus
ENSCING00000009276	-	100	62.222	ENSSTOG00000010653	LUC7L	99	61.765	Ictidomys_tridecemlineatus
ENSCING00000009276	-	100	63.333	ENSJJAG00000011456	Luc7l2	55	63.333	Jaculus_jaculus
ENSCING00000009276	-	100	62.222	ENSJJAG00000002974	Luc7l	55	62.222	Jaculus_jaculus
ENSCING00000009276	-	70	59.524	ENSLBEG00000016917	luc7l	53	59.524	Labrus_bergylta
ENSCING00000009276	-	100	50.556	ENSLOCG00000011945	zgc:158803	55	50.556	Lepisosteus_oculatus
ENSCING00000009276	-	85	35.000	ENSMFAG00000031780	LUC7L3	62	36.735	Macaca_fascicularis
ENSCING00000009276	-	100	62.222	ENSMFAG00000003743	LUC7L	50	62.222	Macaca_fascicularis
ENSCING00000009276	-	100	63.333	ENSMMUG00000006770	C7orf55-LUC7L2	55	63.333	Macaca_mulatta
ENSCING00000009276	-	85	35.000	ENSMMUG00000010117	LUC7L3	62	36.735	Macaca_mulatta
ENSCING00000009276	-	94	62.353	ENSMNEG00000042011	LUC7L2	51	62.353	Macaca_nemestrina
ENSCING00000009276	-	85	35.000	ENSMNEG00000005520	LUC7L3	62	36.735	Macaca_nemestrina
ENSCING00000009276	-	100	62.222	ENSMNEG00000044263	LUC7L	53	62.222	Macaca_nemestrina
ENSCING00000009276	-	85	35.000	ENSMLEG00000034172	LUC7L3	62	36.735	Mandrillus_leucophaeus
ENSCING00000009276	-	100	60.000	ENSMAMG00000003914	zgc:158803	58	60.000	Mastacembelus_armatus
ENSCING00000009276	-	100	61.111	ENSMZEG00005011133	luc7l	52	61.111	Maylandia_zebra
ENSCING00000009276	-	84	31.818	ENSMICG00000027443	-	68	31.818	Microcebus_murinus
ENSCING00000009276	-	85	35.000	ENSMICG00000009835	-	66	35.000	Microcebus_murinus
ENSCING00000009276	-	100	62.222	ENSMOCG00000022342	Luc7l	99	61.765	Microtus_ochrogaster
ENSCING00000009276	-	100	63.889	ENSMOCG00000014631	Luc7l2	55	63.889	Microtus_ochrogaster
ENSCING00000009276	-	70	58.730	ENSMMOG00000002342	luc7l	54	58.730	Mola_mola
ENSCING00000009276	-	100	59.444	ENSMMOG00000008426	zgc:158803	54	59.444	Mola_mola
ENSCING00000009276	-	70	57.143	ENSMALG00000002761	luc7l	51	57.143	Monopterus_albus
ENSCING00000009276	-	100	63.889	MGP_CAROLIEiJ_G0028237	Luc7l2	55	63.889	Mus_caroli
ENSCING00000009276	-	100	62.222	MGP_CAROLIEiJ_G0021279	Luc7l	99	61.765	Mus_caroli
ENSCING00000009276	-	100	62.222	ENSMUSG00000024188	Luc7l	55	62.222	Mus_musculus
ENSCING00000009276	-	100	63.889	ENSMUSG00000029823	Luc7l2	55	63.889	Mus_musculus
ENSCING00000009276	-	100	62.222	MGP_PahariEiJ_G0023597	Luc7l	99	61.765	Mus_pahari
ENSCING00000009276	-	100	63.889	MGP_SPRETEiJ_G0029236	Luc7l2	55	63.889	Mus_spretus
ENSCING00000009276	-	100	62.222	MGP_SPRETEiJ_G0022190	Luc7l	99	61.765	Mus_spretus
ENSCING00000009276	-	100	62.222	ENSNGAG00000000074	Luc7l	55	62.222	Nannospalax_galili
ENSCING00000009276	-	100	63.889	ENSNGAG00000015693	Luc7l2	55	63.889	Nannospalax_galili
ENSCING00000009276	-	100	60.556	ENSNBRG00000018476	zgc:158803	56	60.556	Neolamprologus_brichardi
ENSCING00000009276	-	70	61.111	ENSNLEG00000032729	-	71	61.111	Nomascus_leucogenys
ENSCING00000009276	-	100	45.810	ENSOPRG00000016680	-	79	45.810	Ochotona_princeps
ENSCING00000009276	-	100	62.222	ENSPPAG00000041773	LUC7L	55	62.222	Pan_paniscus
ENSCING00000009276	-	85	35.000	ENSPPAG00000025115	LUC7L3	62	36.735	Pan_paniscus
ENSCING00000009276	-	85	35.000	ENSPPRG00000002605	LUC7L3	69	37.037	Panthera_pardus
ENSCING00000009276	-	100	62.222	ENSPTRG00000007533	LUC7L	55	62.222	Pan_troglodytes
ENSCING00000009276	-	85	35.000	ENSPTRG00000009409	LUC7L3	62	36.735	Pan_troglodytes
ENSCING00000009276	-	85	35.000	ENSPANG00000022461	LUC7L3	70	35.000	Papio_anubis
ENSCING00000009276	-	100	62.222	ENSPANG00000020037	LUC7L	50	62.222	Papio_anubis
ENSCING00000009276	-	100	60.556	ENSPKIG00000009647	luc7l	53	60.556	Paramormyrops_kingsleyae
ENSCING00000009276	-	100	60.556	ENSPMGG00000004356	luc7l	56	60.556	Periophthalmus_magnuspinnatus
ENSCING00000009276	-	100	63.889	ENSPEMG00000022741	Luc7l2	55	63.889	Peromyscus_maniculatus_bairdii
ENSCING00000009276	-	100	62.222	ENSPEMG00000011291	Luc7l	99	61.765	Peromyscus_maniculatus_bairdii
ENSCING00000009276	-	93	57.225	ENSPMAG00000004423	luc7l	76	57.225	Petromyzon_marinus
ENSCING00000009276	-	100	60.556	ENSPFOG00000018484	luc7l	51	60.556	Poecilia_formosa
ENSCING00000009276	-	100	60.556	ENSPLAG00000000543	luc7l	50	60.556	Poecilia_latipinna
ENSCING00000009276	-	100	60.556	ENSPMEG00000019875	luc7l	50	60.556	Poecilia_mexicana
ENSCING00000009276	-	70	58.730	ENSPREG00000017430	luc7l	52	58.730	Poecilia_reticulata
ENSCING00000009276	-	100	63.333	ENSPPYG00000018048	LUC7L2	50	63.333	Pongo_abelii
ENSCING00000009276	-	85	35.000	ENSPCOG00000022270	LUC7L3	62	36.735	Propithecus_coquereli
ENSCING00000009276	-	100	60.335	ENSPNAG00000001926	zgc:158803	50	60.335	Pygocentrus_nattereri
ENSCING00000009276	-	85	35.000	ENSRBIG00000032055	LUC7L3	62	36.735	Rhinopithecus_bieti
ENSCING00000009276	-	100	62.222	ENSRBIG00000033552	LUC7L	50	62.222	Rhinopithecus_bieti
ENSCING00000009276	-	85	35.000	ENSRROG00000039925	LUC7L3	62	36.735	Rhinopithecus_roxellana
ENSCING00000009276	-	100	62.222	ENSRROG00000041858	LUC7L	55	62.222	Rhinopithecus_roxellana
ENSCING00000009276	-	85	35.000	ENSSBOG00000034373	LUC7L3	62	36.735	Saimiri_boliviensis_boliviensis
ENSCING00000009276	-	100	60.000	ENSSFOG00015012543	-	53	60.000	Scleropages_formosus
ENSCING00000009276	-	100	60.556	ENSSMAG00000011965	luc7l	55	60.556	Scophthalmus_maximus
ENSCING00000009276	-	100	61.111	ENSSDUG00000002962	luc7l	53	61.111	Seriola_dumerili
ENSCING00000009276	-	100	61.111	ENSSLDG00000021375	luc7l	53	61.111	Seriola_lalandi_dorsalis
ENSCING00000009276	-	100	61.667	ENSSARG00000000832	LUC7L	55	61.667	Sorex_araneus
ENSCING00000009276	-	70	61.111	ENSSPUG00000008342	LUC7L	54	61.111	Sphenodon_punctatus
ENSCING00000009276	-	100	60.000	ENSSPAG00000013318	zgc:158803	60	55.556	Stegastes_partitus
ENSCING00000009276	-	100	61.111	ENSSPAG00000011962	luc7l	50	61.111	Stegastes_partitus
ENSCING00000009276	-	100	63.333	ENSSSCG00000016509	-	55	63.333	Sus_scrofa
ENSCING00000009276	-	85	31.447	ENSSSCG00000037460	-	67	31.447	Sus_scrofa
ENSCING00000009276	-	60	33.929	ENSTGUG00000014635	-	91	33.929	Taeniopygia_guttata
ENSCING00000009276	-	100	61.111	ENSTRUG00000016335	luc7l	54	61.111	Takifugu_rubripes
ENSCING00000009276	-	97	59.770	ENSTNIG00000012841	luc7l	52	59.770	Tetraodon_nigroviridis
ENSCING00000009276	-	85	58.824	ENSTNIG00000005519	zgc:158803	67	58.824	Tetraodon_nigroviridis
ENSCING00000009276	-	85	61.438	ENSVPAG00000011896	LUC7L	50	61.438	Vicugna_pacos
ENSCING00000009276	-	92	59.639	ENSXETG00000011562	luc7l	53	59.639	Xenopus_tropicalis
ENSCING00000009276	-	100	61.667	ENSXETG00000000229	luc7l2	50	59.627	Xenopus_tropicalis
ENSCING00000009276	-	100	59.444	ENSXCOG00000002747	luc7l	52	59.444	Xiphophorus_couchianus
ENSCING00000009276	-	100	59.444	ENSXMAG00000018644	luc7l	57	59.444	Xiphophorus_maculatus