EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009308 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 11013 bases
Position: chr14:1694141-1705153
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000018923	ResIII	PF04851.15	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000018923	-	2437	-	ENSCINP00000018923	627 (aa)	-	F6ZN89

Gene Model

Click here to download ENSCING00000009308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009308	-	100	47.969	ENSG00000138375	SMARCAL1	78	53.906	Homo_sapiens
ENSCING00000009308	-	100	48.438	ENSAPOG00000020156	SMARCAL1	80	48.438	Acanthochromis_polyacanthus
ENSCING00000009308	-	100	49.062	ENSACIG00000001500	smarcal1	92	49.062	Amphilophus_citrinellus
ENSCING00000009308	-	99	48.899	ENSAOCG00000014266	SMARCAL1	71	48.899	Amphiprion_ocellaris
ENSCING00000009308	-	100	48.594	ENSAPEG00000015861	SMARCAL1	67	56.069	Amphiprion_percula
ENSCING00000009308	-	100	48.594	ENSATEG00000020624	SMARCAL1	72	48.906	Anabas_testudineus
ENSCING00000009308	-	99	48.457	ENSAPLG00000009864	SMARCAL1	68	49.375	Anas_platyrhynchos
ENSCING00000009308	-	100	48.056	ENSACAG00000004612	SMARCAL1	67	48.056	Anolis_carolinensis
ENSCING00000009308	-	100	48.125	ENSACLG00000015990	SMARCAL1	71	48.125	Astatotilapia_calliptera
ENSCING00000009308	-	100	48.920	ENSAMXG00000003350	smarcal1	72	49.219	Astyanax_mexicanus
ENSCING00000009308	-	99	49.135	ENSCPBG00000013599	SMARCAL1	67	48.125	Chrysemys_picta_bellii
ENSCING00000009308	-	100	49.221	ENSCSEG00000010785	SMARCAL1	72	49.221	Cynoglossus_semilaevis
ENSCING00000009308	-	100	48.762	ENSCVAG00000018780	SMARCAL1	77	48.746	Cyprinodon_variegatus
ENSCING00000009308	-	81	43.212	ENSEBUG00000011906	SMARCAL1	87	43.595	Eptatretus_burgeri
ENSCING00000009308	-	100	47.500	ENSELUG00000010440	-	63	47.500	Esox_lucius
ENSCING00000009308	-	100	48.200	ENSFALG00000003981	SMARCAL1	68	48.200	Ficedula_albicollis
ENSCING00000009308	-	100	48.750	ENSFHEG00000008380	SMARCAL1	72	48.750	Fundulus_heteroclitus
ENSCING00000009308	-	75	49.169	ENSGMOG00000010034	smarcal1	91	47.170	Gadus_morhua
ENSCING00000009308	-	99	48.826	ENSGALG00000011475	RPL37A	66	48.826	Gallus_gallus
ENSCING00000009308	-	92	52.354	ENSGACG00000006073	SMARCAL1	99	52.602	Gasterosteus_aculeatus
ENSCING00000009308	-	100	48.281	ENSGAGG00000015660	SMARCAL1	69	48.281	Gopherus_agassizii
ENSCING00000009308	-	100	48.281	ENSHBUG00000002973	smarcal1	71	48.281	Haplochromis_burtoni
ENSCING00000009308	-	99	47.418	ENSHCOG00000017921	smarcal1	76	47.418	Hippocampus_comes
ENSCING00000009308	-	100	48.154	ENSKMAG00000012023	SMARCAL1	75	48.154	Kryptolebias_marmoratus
ENSCING00000009308	-	100	46.812	ENSLBEG00000022915	smarcal1	83	46.812	Labrus_bergylta
ENSCING00000009308	-	98	48.730	ENSLBEG00000003493	smarcal1	81	48.730	Labrus_bergylta
ENSCING00000009308	-	100	43.750	ENSLACG00000010974	SMARCAL1	66	43.750	Latimeria_chalumnae
ENSCING00000009308	-	100	49.610	ENSLOCG00000009637	smarcal1	81	49.610	Lepisosteus_oculatus
ENSCING00000009308	-	100	48.281	ENSMAMG00000000828	SMARCAL1	72	48.281	Mastacembelus_armatus
ENSCING00000009308	-	100	48.125	ENSMZEG00005007660	SMARCAL1	71	48.125	Maylandia_zebra
ENSCING00000009308	-	99	49.139	ENSMGAG00000011658	SMARCAL1	73	49.139	Meleagris_gallopavo
ENSCING00000009308	-	100	48.000	ENSMMOG00000003842	smarcal1	78	48.000	Mola_mola
ENSCING00000009308	-	100	48.062	ENSMODG00000015544	SMARCAL1	66	48.062	Monodelphis_domestica
ENSCING00000009308	-	100	47.812	ENSNBRG00000016273	smarcal1	82	47.812	Neolamprologus_brichardi
ENSCING00000009308	-	99	48.013	ENSMEUG00000004395	SMARCAL1	72	48.038	Notamacropus_eugenii
ENSCING00000009308	-	100	49.048	ENSONIG00000009036	smarcal1	93	49.048	Oreochromis_niloticus
ENSCING00000009308	-	100	49.060	ENSORLG00000016455	SMARCAL1	77	49.060	Oryzias_latipes
ENSCING00000009308	-	100	49.060	ENSORLG00020001610	SMARCAL1	77	49.060	Oryzias_latipes_hni
ENSCING00000009308	-	100	49.060	ENSORLG00015001865	SMARCAL1	77	49.060	Oryzias_latipes_hsok
ENSCING00000009308	-	100	48.433	ENSOMEG00000001845	smarcal1	78	48.433	Oryzias_melastigma
ENSCING00000009308	-	100	47.442	ENSPMGG00000019092	SMARCAL1	74	47.442	Periophthalmus_magnuspinnatus
ENSCING00000009308	-	100	48.357	ENSPCIG00000022514	SMARCAL1	70	48.357	Phascolarctos_cinereus
ENSCING00000009308	-	99	49.219	ENSPFOG00000000560	SMARCAL1	72	49.219	Poecilia_formosa
ENSCING00000009308	-	99	49.062	ENSPMEG00000018146	SMARCAL1	72	49.062	Poecilia_mexicana
ENSCING00000009308	-	68	53.991	ENSPREG00000009591	SMARCAL1	76	53.991	Poecilia_reticulata
ENSCING00000009308	-	100	47.656	ENSPNAG00000014900	smarcal1	70	48.125	Pygocentrus_nattereri
ENSCING00000009308	-	100	45.016	ENSSHAG00000013538	SMARCAL1	70	45.008	Sarcophilus_harrisii
ENSCING00000009308	-	100	48.442	ENSSMAG00000010427	SMARCAL1	69	48.287	Scophthalmus_maximus
ENSCING00000009308	-	100	48.750	ENSSDUG00000017470	SMARCAL1	68	48.750	Seriola_dumerili
ENSCING00000009308	-	100	48.906	ENSSLDG00000007224	SMARCAL1	69	48.906	Seriola_lalandi_dorsalis
ENSCING00000009308	-	99	47.887	ENSSPUG00000015369	SMARCAL1	67	47.887	Sphenodon_punctatus
ENSCING00000009308	-	100	47.812	ENSSPAG00000003742	smarcal1	81	48.125	Stegastes_partitus
ENSCING00000009308	-	99	47.087	ENSSSCG00000035501	SMARCAL1	70	47.377	Sus_scrofa
ENSCING00000009308	-	100	48.967	ENSTGUG00000005079	SMARCAL1	93	49.287	Taeniopygia_guttata
ENSCING00000009308	-	100	47.930	ENSTRUG00000010701	SMARCAL1	71	47.930	Takifugu_rubripes
ENSCING00000009308	-	99	39.655	ENSTTRG00000009001	SMARCAL1	66	40.476	Tursiops_truncatus
ENSCING00000009308	-	100	47.840	ENSXETG00000000465	smarcal1	71	47.840	Xenopus_tropicalis