EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000009335 (Gene tree)
Gene ID
100183239
Gene Symbol
-
Alias
-
Full Name
serine--tRNA ligase%2C cytoplasmic-like
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Minus strand
Length
6456 bases
Position
chr5:1968786-1975241
Accession
100183239
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000018980Seryl_tRNA_NPF02403.225.3e-1911
ENSCINP00000033278Seryl_tRNA_NPF02403.225.3e-1911
ENSCINP00000018980tRNA-synt_2bPF00587.251.9e-4411
ENSCINP00000033278tRNA-synt_2bPF00587.251.9e-4411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000018980-1879-ENSCINP00000018980506 (aa)XP_002127248F6Z423
ENSCINT00000032718-1557-ENSCINP00000033278510 (aa)-H2XUE4
Gene Model
Click here to download ENSCING00000009335's gene model file
Pathways
Pathway IDPathway NameSource
cin00970Aminoacyl-tRNA biosynthesisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009335's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000009335-9972.407ENSG00000031698SARS9374.530Homo_sapiens
ENSCING00000009335-6431.118ENSAPOG00000006562sars26131.118Acanthochromis_polyacanthus
ENSCING00000009335-9574.741ENSAPOG00000003503sars9374.948Acanthochromis_polyacanthus
ENSCING00000009335-10073.114ENSAMEG00000004567SARS9375.574Ailuropoda_melanoleuca
ENSCING00000009335-6431.722ENSACIG00000002059sars26331.722Amphilophus_citrinellus
ENSCING00000009335-10071.318ENSACIG00000005454sars9374.530Amphilophus_citrinellus
ENSCING00000009335-6431.118ENSAOCG00000007157sars26231.118Amphiprion_ocellaris
ENSCING00000009335-9575.569ENSAOCG00000018656sars9375.783Amphiprion_ocellaris
ENSCING00000009335-9575.362ENSAPEG00000021233sars9375.574Amphiprion_percula
ENSCING00000009335-6431.515ENSATEG00000021919sars27231.515Anabas_testudineus
ENSCING00000009335-9575.569ENSATEG00000002081sars9375.783Anabas_testudineus
ENSCING00000009335-9173.019ENSAPLG00000012511SARS9275.520Anas_platyrhynchos
ENSCING00000009335-10073.489ENSACAG00000010269SARS9973.489Anolis_carolinensis
ENSCING00000009335-6530.952ENSANAG00000034330-6633.858Aotus_nancymaae
ENSCING00000009335-10072.407ENSANAG00000038038SARS9374.948Aotus_nancymaae
ENSCING00000009335-9675.154ENSACLG00000009251sars9375.574Astatotilapia_calliptera
ENSCING00000009335-6430.514ENSACLG00000011683sars26030.514Astatotilapia_calliptera
ENSCING00000009335-6531.751ENSAMXG00000041666sars26231.751Astyanax_mexicanus
ENSCING00000009335-9475.840ENSAMXG00000016507sars10072.233Astyanax_mexicanus
ENSCING00000009335-9972.798ENSBTAG00000012962SARS9375.157Bos_taurus
ENSCING00000009335-6630.294ENSBTAG00000001780SARS26330.294Bos_taurus
ENSCING00000009335-5432.384WBGene00005662sars-28534.694Caenorhabditis_elegans
ENSCING00000009335-9767.480WBGene00005663sars-19868.125Caenorhabditis_elegans
ENSCING00000009335-9972.299ENSCJAG00000048384SARS9474.530Callithrix_jacchus
ENSCING00000009335-6530.655ENSCJAG00000013994-6633.858Callithrix_jacchus
ENSCING00000009335-10072.921ENSCAFG00000019847SARS9375.574Canis_familiaris
ENSCING00000009335-10072.921ENSCAFG00020010457SARS9375.574Canis_lupus_dingo
ENSCING00000009335-6430.514ENSCAFG00020016808-6330.514Canis_lupus_dingo
ENSCING00000009335-6630.000ENSCHIG00000024636-6330.000Capra_hircus
ENSCING00000009335-9972.603ENSCHIG00000019575SARS9374.948Capra_hircus
ENSCING00000009335-8672.172ENSTSYG00000001108SARS9275.122Carlito_syrichta
ENSCING00000009335-9163.889ENSCAPG00000000321SARS9165.596Cavia_aperea
ENSCING00000009335-6631.268ENSCAPG00000006315-7831.268Cavia_aperea
ENSCING00000009335-6631.268ENSCPOG00000008471-6331.268Cavia_porcellus
ENSCING00000009335-9972.994ENSCPOG00000015713SARS9375.157Cavia_porcellus
ENSCING00000009335-6530.357ENSCCAG00000027866-7333.071Cebus_capucinus
ENSCING00000009335-9972.692ENSCCAG00000029075SARS9474.948Cebus_capucinus
ENSCING00000009335-9861.584ENSCATG00000042974SARS9362.737Cercocebus_atys
ENSCING00000009335-9972.994ENSCLAG00000004902SARS9375.157Chinchilla_lanigera
ENSCING00000009335-6630.678ENSCLAG00000016477-6330.678Chinchilla_lanigera
ENSCING00000009335-9971.820ENSCPBG00000010631SARS9373.904Chrysemys_picta_bellii
ENSCING00000009335-6531.085ENSCPBG00000018938-7131.085Chrysemys_picta_bellii
ENSCING00000009335-9988.166ENSCSAVG00000008813-10088.803Ciona_savignyi
ENSCING00000009335-6631.988ENSCSAVG00000004919-7431.988Ciona_savignyi
ENSCING00000009335-9962.524ENSCANG00000037241SARS9463.711Colobus_angolensis_palliatus
ENSCING00000009335-9971.709ENSCGRG00001012323SARS9474.322Cricetulus_griseus_chok1gshd
ENSCING00000009335-9971.709ENSCGRG00000014653SARS9474.322Cricetulus_griseus_crigri
ENSCING00000009335-9575.155ENSCSEG00000002268sars9972.211Cynoglossus_semilaevis
ENSCING00000009335-6431.642ENSCVAG00000006065sars26131.642Cyprinodon_variegatus
ENSCING00000009335-9972.495ENSCVAG00000018550sars9972.692Cyprinodon_variegatus
ENSCING00000009335-6833.240ENSDARG00000102736sars26234.431Danio_rerio
ENSCING00000009335-9475.891ENSDARG00000008237sars9972.852Danio_rerio
ENSCING00000009335-9848.000ENSDNOG00000034198-9348.225Dasypus_novemcinctus
ENSCING00000009335-9972.798ENSDNOG00000024033-9972.798Dasypus_novemcinctus
ENSCING00000009335-9959.730ENSDORG00000006920Sars9265.942Dipodomys_ordii
ENSCING00000009335-9570.226FBgn0031497SerRS9670.226Drosophila_melanogaster
ENSCING00000009335-9869.231ENSETEG00000020092SARS9370.600Echinops_telfairi
ENSCING00000009335-9771.919ENSEBUG00000006064sars9472.651Eptatretus_burgeri
ENSCING00000009335-9973.581ENSEASG00005002461SARS9375.574Equus_asinus_asinus
ENSCING00000009335-6531.250ENSEASG00005019719-6331.250Equus_asinus_asinus
ENSCING00000009335-6531.250ENSECAG00000019654-6331.250Equus_caballus
ENSCING00000009335-9973.581ENSECAG00000020190SARS9375.574Equus_caballus
ENSCING00000009335-10069.331ENSEEUG00000010791SARS9371.600Erinaceus_europaeus
ENSCING00000009335-6731.429ENSELUG00000019620sars26631.429Esox_lucius
ENSCING00000009335-9476.409ENSELUG00000012684sars9376.409Esox_lucius
ENSCING00000009335-5730.717ENSFCAG00000003187-6933.858Felis_catus
ENSCING00000009335-10073.114ENSFCAG00000015258SARS9375.574Felis_catus
ENSCING00000009335-9970.175ENSFALG00000002345SARS9373.069Ficedula_albicollis
ENSCING00000009335-9971.820ENSFDAG00000021349SARS9374.113Fukomys_damarensis
ENSCING00000009335-9575.155ENSFHEG00000014797sars9375.365Fundulus_heteroclitus
ENSCING00000009335-6431.642ENSFHEG00000017434sars25931.642Fundulus_heteroclitus
ENSCING00000009335-9474.739ENSGMOG00000004761sars9474.739Gadus_morhua
ENSCING00000009335-10072.904ENSGALG00000026809SARS7575.574Gallus_gallus
ENSCING00000009335-7330.189ENSGALG00000035641-7030.189Gallus_gallus
ENSCING00000009335-6731.429ENSGAFG00000013381sars26431.429Gambusia_affinis
ENSCING00000009335-9972.710ENSGAFG00000000332sars9375.783Gambusia_affinis
ENSCING00000009335-6730.347ENSGACG00000005820sars26530.548Gasterosteus_aculeatus
ENSCING00000009335-9675.410ENSGACG00000004044sars9375.992Gasterosteus_aculeatus
ENSCING00000009335-6731.534ENSGAGG00000009753-7431.534Gopherus_agassizii
ENSCING00000009335-9972.407ENSGAGG00000018557SARS9374.530Gopherus_agassizii
ENSCING00000009335-8872.987ENSGGOG00000001752SARS9972.987Gorilla_gorilla
ENSCING00000009335-9575.362ENSHBUG00000005264sars9375.574Haplochromis_burtoni
ENSCING00000009335-9972.016ENSHGLG00000004639-9971.233Heterocephalus_glaber_female
ENSCING00000009335-9055.773ENSHGLG00000001476-9156.876Heterocephalus_glaber_female
ENSCING00000009335-9972.016ENSHGLG00100014719-9971.233Heterocephalus_glaber_male
ENSCING00000009335-9055.773ENSHGLG00100011265-9156.876Heterocephalus_glaber_male
ENSCING00000009335-6832.022ENSHCOG00000017362sars26532.022Hippocampus_comes
ENSCING00000009335-10072.244ENSHCOG00000007816sars9972.530Hippocampus_comes
ENSCING00000009335-10071.595ENSIPUG00000018281Sars9374.322Ictalurus_punctatus
ENSCING00000009335-6431.832ENSIPUG00000017755sars25831.832Ictalurus_punctatus
ENSCING00000009335-9973.465ENSSTOG00000011167SARS9375.365Ictidomys_tridecemlineatus
ENSCING00000009335-9972.871ENSJJAG00000000280Sars9374.948Jaculus_jaculus
ENSCING00000009335-9574.327ENSKMAG00000008047sars9374.220Kryptolebias_marmoratus
ENSCING00000009335-6730.058ENSKMAG00000020640sars26530.058Kryptolebias_marmoratus
ENSCING00000009335-6531.657ENSLBEG00000011593sars25731.657Labrus_bergylta
ENSCING00000009335-9575.362ENSLBEG00000019469sars9973.047Labrus_bergylta
ENSCING00000009335-9969.942ENSLOCG00000012557sars9372.428Lepisosteus_oculatus
ENSCING00000009335-9972.407ENSLAFG00000017132SARS9374.948Loxodonta_africana
ENSCING00000009335-9163.124ENSMFAG00000043301SARS8663.124Macaca_fascicularis
ENSCING00000009335-9473.739ENSMMUG00000021837SARS10073.739Macaca_mulatta
ENSCING00000009335-9956.078ENSMLEG00000035592SARS9356.122Mandrillus_leucophaeus
ENSCING00000009335-9973.529ENSMAMG00000000638sars9973.922Mastacembelus_armatus
ENSCING00000009335-5432.246ENSMAMG00000012860sars26130.240Mastacembelus_armatus
ENSCING00000009335-6430.514ENSMZEG00005005189sars26430.514Maylandia_zebra
ENSCING00000009335-9575.362ENSMZEG00005012167sars9375.574Maylandia_zebra
ENSCING00000009335-9173.876ENSMGAG00000013540SARS9376.905Meleagris_gallopavo
ENSCING00000009335-9965.625ENSMAUG00000006723Sars10081.579Mesocricetus_auratus
ENSCING00000009335-9972.211ENSMICG00000047557SARS9374.322Microcebus_murinus
ENSCING00000009335-9971.906ENSMOCG00000020742Sars9474.530Microtus_ochrogaster
ENSCING00000009335-9971.875ENSMMOG00000020205sars9374.739Mola_mola
ENSCING00000009335-6432.335ENSMMOG00000007091sars26232.335Mola_mola
ENSCING00000009335-9971.961ENSMODG00000002154SARS9374.322Monodelphis_domestica
ENSCING00000009335-6431.024ENSMALG00000020168sars26330.321Monopterus_albus
ENSCING00000009335-9574.844ENSMALG00000015983sars9474.844Monopterus_albus
ENSCING00000009335-9972.495MGP_CAROLIEiJ_G0025531Sars9980.556Mus_caroli
ENSCING00000009335-9972.102ENSMUSG00000068739Sars9980.556Mus_musculus
ENSCING00000009335-9972.495MGP_PahariEiJ_G0026977Sars9980.556Mus_pahari
ENSCING00000009335-9972.102MGP_SPRETEiJ_G0026481Sars9980.556Mus_spretus
ENSCING00000009335-6530.060ENSMPUG00000017751-6230.060Mustela_putorius_furo
ENSCING00000009335-9973.386ENSMPUG00000002952SARS9375.574Mustela_putorius_furo
ENSCING00000009335-10071.650ENSMLUG00000008335SARS9473.805Myotis_lucifugus
ENSCING00000009335-6630.588ENSMLUG00000000998-6330.588Myotis_lucifugus
ENSCING00000009335-9972.157ENSNGAG00000001971Sars9374.530Nannospalax_galili
ENSCING00000009335-7576.596ENSNBRG00000017164sars8676.596Neolamprologus_brichardi
ENSCING00000009335-6430.211ENSNBRG00000001755sars26330.211Neolamprologus_brichardi
ENSCING00000009335-9972.603ENSNLEG00000002430SARS9374.739Nomascus_leucogenys
ENSCING00000009335-9860.429ENSMEUG00000008679SARS9461.179Notamacropus_eugenii
ENSCING00000009335-6430.000ENSMEUG00000012092-6530.183Notamacropus_eugenii
ENSCING00000009335-5984.615ENSOPRG00000008743SARS5684.615Ochotona_princeps
ENSCING00000009335-6430.909ENSODEG00000016702-6130.909Octodon_degus
ENSCING00000009335-9972.994ENSODEG00000005296SARS9375.365Octodon_degus
ENSCING00000009335-6432.143ENSONIG00000016635sars26632.143Oreochromis_niloticus
ENSCING00000009335-9574.741ENSONIG00000009102sars9374.948Oreochromis_niloticus
ENSCING00000009335-8671.622ENSOANG00000009192SARS9274.515Ornithorhynchus_anatinus
ENSCING00000009335-9972.798ENSOCUG00000008625SARS9374.948Oryctolagus_cuniculus
ENSCING00000009335-9574.534ENSORLG00000001547sars9374.428Oryzias_latipes
ENSCING00000009335-6431.138ENSORLG00000008723sars27631.138Oryzias_latipes
ENSCING00000009335-9574.534ENSORLG00020002477sars9374.428Oryzias_latipes_hni
ENSCING00000009335-6430.838ENSORLG00020019810sars26131.024Oryzias_latipes_hni
ENSCING00000009335-9574.534ENSORLG00015016924sars9374.428Oryzias_latipes_hsok
ENSCING00000009335-6430.838ENSORLG00015001254sars27530.838Oryzias_latipes_hsok
ENSCING00000009335-9574.534ENSOMEG00000013121sars9374.739Oryzias_melastigma
ENSCING00000009335-6431.138ENSOMEG00000018375sars26131.138Oryzias_melastigma
ENSCING00000009335-9972.407ENSOGAG00000013508SARS9374.739Otolemur_garnettii
ENSCING00000009335-6630.000ENSOGAG00000008291-6330.000Otolemur_garnettii
ENSCING00000009335-9972.603ENSOARG00000019108SARS9374.948Ovis_aries
ENSCING00000009335-9972.603ENSPPAG00000043924SARS9572.603Pan_paniscus
ENSCING00000009335-6530.655ENSPPRG00000019182-6230.655Panthera_pardus
ENSCING00000009335-10072.921ENSPPRG00000007452SARS9375.365Panthera_pardus
ENSCING00000009335-10073.114ENSPTIG00000013123SARS9375.574Panthera_tigris_altaica
ENSCING00000009335-5730.375ENSPTIG00000007979-6933.858Panthera_tigris_altaica
ENSCING00000009335-9972.603ENSPTRG00000001043SARS9969.606Pan_troglodytes
ENSCING00000009335-9970.646ENSPANG00000006509SARS9372.651Papio_anubis
ENSCING00000009335-9474.322ENSPKIG00000004342sars9971.289Paramormyrops_kingsleyae
ENSCING00000009335-6432.153ENSPKIG00000000234sars26132.153Paramormyrops_kingsleyae
ENSCING00000009335-6530.178ENSPSIG00000012929-7730.178Pelodiscus_sinensis
ENSCING00000009335-9972.016ENSPSIG00000010500SARS9473.805Pelodiscus_sinensis
ENSCING00000009335-9574.534ENSPMGG00000020752sars9374.739Periophthalmus_magnuspinnatus
ENSCING00000009335-6531.471ENSPMGG00000009119sars26231.471Periophthalmus_magnuspinnatus
ENSCING00000009335-9972.495ENSPEMG00000013142Sars9474.739Peromyscus_maniculatus_bairdii
ENSCING00000009335-8872.260ENSPMAG00000006797sars9572.831Petromyzon_marinus
ENSCING00000009335-6733.051ENSPMAG00000002160sars26333.051Petromyzon_marinus
ENSCING00000009335-9972.016ENSPCIG00000024879SARS9374.739Phascolarctos_cinereus
ENSCING00000009335-6430.303ENSPCIG00000010533-6130.303Phascolarctos_cinereus
ENSCING00000009335-9574.948ENSPFOG00000005074sars9775.157Poecilia_formosa
ENSCING00000009335-6730.857ENSPFOG00000002338sars26631.343Poecilia_formosa
ENSCING00000009335-6431.343ENSPLAG00000006817sars27331.343Poecilia_latipinna
ENSCING00000009335-9574.948ENSPLAG00000003701sars9775.157Poecilia_latipinna
ENSCING00000009335-6431.343ENSPMEG00000009775sars27631.343Poecilia_mexicana
ENSCING00000009335-9959.728ENSPMEG00000010048sars9361.570Poecilia_mexicana
ENSCING00000009335-8375.238ENSPREG00000003083sars9975.238Poecilia_reticulata
ENSCING00000009335-9969.231ENSPPYG00000001080SARS9968.480Pongo_abelii
ENSCING00000009335-9865.844ENSPCAG00000006308SARS9366.799Procavia_capensis
ENSCING00000009335-9972.211ENSPCOG00000013876SARS9374.322Propithecus_coquereli
ENSCING00000009335-9171.636ENSPVAG00000008898SARS9971.843Pteropus_vampyrus
ENSCING00000009335-6430.211ENSPNYG00000001941sars26430.211Pundamilia_nyererei
ENSCING00000009335-9575.362ENSPNYG00000005062sars9375.574Pundamilia_nyererei
ENSCING00000009335-6432.432ENSPNAG00000024745sars26532.432Pygocentrus_nattereri
ENSCING00000009335-9475.365ENSPNAG00000022638sars9375.365Pygocentrus_nattereri
ENSCING00000009335-9973.084ENSRNOG00000020255Sars9475.574Rattus_norvegicus
ENSCING00000009335-9971.820ENSRROG00000037897SARS9374.113Rhinopithecus_roxellana
ENSCING00000009335-6734.006YHR011W-7533.523Saccharomyces_cerevisiae
ENSCING00000009335-9346.296YDR023WSES19746.296Saccharomyces_cerevisiae
ENSCING00000009335-9972.888ENSSBOG00000035868SARS9475.157Saimiri_boliviensis_boliviensis
ENSCING00000009335-6530.952ENSSBOG00000024002-6734.646Saimiri_boliviensis_boliviensis
ENSCING00000009335-9972.016ENSSHAG00000017855SARS9374.739Sarcophilus_harrisii
ENSCING00000009335-6432.070ENSSFOG00015007160sars26132.070Scleropages_formosus
ENSCING00000009335-9473.695ENSSFOG00015023183sars9373.695Scleropages_formosus
ENSCING00000009335-9575.983ENSSMAG00000004870sars9375.884Scophthalmus_maximus
ENSCING00000009335-6431.118ENSSDUG00000010702sars26131.118Seriola_dumerili
ENSCING00000009335-9574.534ENSSDUG00000017088sars9374.739Seriola_dumerili
ENSCING00000009335-6630.523ENSSLDG00000000426sars26630.523Seriola_lalandi_dorsalis
ENSCING00000009335-9574.948ENSSLDG00000010724sars8575.157Seriola_lalandi_dorsalis
ENSCING00000009335-7770.036ENSSARG00000001289SARS7274.286Sorex_araneus
ENSCING00000009335-9173.605ENSSPUG00000011201SARS9275.862Sphenodon_punctatus
ENSCING00000009335-9674.949ENSSPAG00000009340sars9375.365Stegastes_partitus
ENSCING00000009335-9872.962ENSSSCG00000006835SARS9374.739Sus_scrofa
ENSCING00000009335-8774.150ENSTGUG00000001437SARS9874.596Taeniopygia_guttata
ENSCING00000009335-6432.544ENSTRUG00000004509sars26232.544Takifugu_rubripes
ENSCING00000009335-9973.242ENSTRUG00000007166sars9376.091Takifugu_rubripes
ENSCING00000009335-6431.722ENSTNIG00000014335sars27230.513Tetraodon_nigroviridis
ENSCING00000009335-9965.421ENSTBEG00000007007SARS9366.998Tupaia_belangeri
ENSCING00000009335-10062.477ENSTTRG00000009548SARS9463.960Tursiops_truncatus
ENSCING00000009335-10072.727ENSUAMG00000022008SARS9375.365Ursus_americanus
ENSCING00000009335-6630.000ENSUAMG00000011023-6330.000Ursus_americanus
ENSCING00000009335-9972.994ENSUMAG00000013199SARS9375.365Ursus_maritimus
ENSCING00000009335-8562.857ENSVPAG00000005573SARS8067.416Vicugna_pacos
ENSCING00000009335-10073.114ENSVVUG00000000914SARS9375.574Vulpes_vulpes
ENSCING00000009335-6430.211ENSVVUG00000006437-6130.211Vulpes_vulpes
ENSCING00000009335-6631.085ENSXETG00000005332sars25531.085Xenopus_tropicalis
ENSCING00000009335-9467.083ENSXETG00000008009sars9467.083Xenopus_tropicalis
ENSCING00000009335-9966.472ENSXCOG00000006176sars9368.685Xiphophorus_couchianus
ENSCING00000009335-6731.714ENSXCOG00000002528sars28031.714Xiphophorus_couchianus
ENSCING00000009335-6731.714ENSXMAG00000002613sars27931.714Xiphophorus_maculatus
ENSCING00000009335-9972.125ENSXMAG00000016138sars9375.157Xiphophorus_maculatus

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