EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009426 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6173 bases
Position: chr7:5285139-5291311
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019166	PseudoU_synth_1	PF01416.20	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019166	-	1277	-	ENSCINP00000019166	371 (aa)	-	F6TLE4

Gene Model

Click here to download ENSCING00000009426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009426	-	91	42.690	ENSG00000177192	PUS1	86	42.690	Homo_sapiens
ENSCING00000009426	-	91	44.315	ENSAPOG00000007254	pus1	81	44.315	Acanthochromis_polyacanthus
ENSCING00000009426	-	94	42.614	ENSAMEG00000013715	PUS1	85	42.614	Ailuropoda_melanoleuca
ENSCING00000009426	-	87	44.954	ENSACIG00000009169	pus1	80	44.954	Amphilophus_citrinellus
ENSCING00000009426	-	91	44.444	ENSAOCG00000022207	pus1	80	44.444	Amphiprion_ocellaris
ENSCING00000009426	-	91	44.444	ENSAPEG00000006039	pus1	86	44.444	Amphiprion_percula
ENSCING00000009426	-	87	46.177	ENSATEG00000020688	pus1	84	46.177	Anabas_testudineus
ENSCING00000009426	-	87	46.037	ENSACAG00000007367	PUS1	88	46.037	Anolis_carolinensis
ENSCING00000009426	-	80	43.189	ENSANAG00000036192	PUS1	92	43.189	Aotus_nancymaae
ENSCING00000009426	-	91	45.190	ENSACLG00000020868	pus1	88	45.190	Astatotilapia_calliptera
ENSCING00000009426	-	87	46.012	ENSAMXG00000008710	pus1	76	46.012	Astyanax_mexicanus
ENSCING00000009426	-	94	43.466	ENSBTAG00000012990	PUS1	87	43.466	Bos_taurus
ENSCING00000009426	-	86	36.905	WBGene00004248	pus-1	80	36.905	Caenorhabditis_elegans
ENSCING00000009426	-	67	43.701	ENSCJAG00000003720	PUS1	70	43.191	Callithrix_jacchus
ENSCING00000009426	-	86	44.720	ENSCAFG00000006429	PUS1	81	44.720	Canis_familiaris
ENSCING00000009426	-	86	44.720	ENSCAFG00020010737	PUS1	75	44.720	Canis_lupus_dingo
ENSCING00000009426	-	94	43.182	ENSCHIG00000000487	PUS1	87	43.182	Capra_hircus
ENSCING00000009426	-	85	44.828	ENSTSYG00000032605	PUS1	87	44.410	Carlito_syrichta
ENSCING00000009426	-	79	44.108	ENSCAPG00000006421	PUS1	99	42.368	Cavia_aperea
ENSCING00000009426	-	95	41.989	ENSCPOG00000001027	PUS1	85	42.265	Cavia_porcellus
ENSCING00000009426	-	88	44.578	ENSCCAG00000015879	PUS1	84	43.421	Cebus_capucinus
ENSCING00000009426	-	94	42.817	ENSCATG00000032870	PUS1	89	42.284	Cercocebus_atys
ENSCING00000009426	-	89	43.243	ENSCLAG00000011689	PUS1	82	41.787	Chinchilla_lanigera
ENSCING00000009426	-	94	42.535	ENSCSAG00000001879	PUS1	83	42.535	Chlorocebus_sabaeus
ENSCING00000009426	-	83	45.338	ENSCPBG00000024715	PUS1	90	44.969	Chrysemys_picta_bellii
ENSCING00000009426	-	95	78.056	ENSCSAVG00000003751	-	75	78.056	Ciona_savignyi
ENSCING00000009426	-	89	39.104	ENSCANG00000035561	PUS1	83	40.065	Colobus_angolensis_palliatus
ENSCING00000009426	-	95	43.575	ENSCGRG00001019592	Pus1	84	43.575	Cricetulus_griseus_chok1gshd
ENSCING00000009426	-	95	43.575	ENSCGRG00000004048	Pus1	90	43.575	Cricetulus_griseus_crigri
ENSCING00000009426	-	92	44.798	ENSCSEG00000003629	pus1	81	44.798	Cynoglossus_semilaevis
ENSCING00000009426	-	92	46.000	ENSCVAG00000001265	pus1	84	46.000	Cyprinodon_variegatus
ENSCING00000009426	-	87	45.092	ENSDARG00000045562	pus1	96	45.149	Danio_rerio
ENSCING00000009426	-	90	43.787	ENSDNOG00000045576	PUS1	94	43.607	Dasypus_novemcinctus
ENSCING00000009426	-	86	42.988	ENSDORG00000011455	Pus1	98	43.302	Dipodomys_ordii
ENSCING00000009426	-	96	39.410	FBgn0038811	PUS1	90	39.410	Drosophila_melanogaster
ENSCING00000009426	-	89	44.012	ENSETEG00000019160	PUS1	81	44.012	Echinops_telfairi
ENSCING00000009426	-	89	37.151	ENSEBUG00000000368	-	65	37.465	Eptatretus_burgeri
ENSCING00000009426	-	86	45.031	ENSEASG00005016535	PUS1	75	45.031	Equus_asinus_asinus
ENSCING00000009426	-	86	45.031	ENSECAG00000006965	PUS1	81	45.031	Equus_caballus
ENSCING00000009426	-	87	44.648	ENSELUG00000010424	pus1	83	44.648	Esox_lucius
ENSCING00000009426	-	89	44.048	ENSFCAG00000010780	PUS1	79	44.048	Felis_catus
ENSCING00000009426	-	88	46.364	ENSFALG00000008273	PUS1	77	46.364	Ficedula_albicollis
ENSCING00000009426	-	91	43.402	ENSFDAG00000012518	PUS1	83	43.402	Fukomys_damarensis
ENSCING00000009426	-	92	44.348	ENSFHEG00000010504	pus1	82	44.348	Fundulus_heteroclitus
ENSCING00000009426	-	91	44.282	ENSGMOG00000008143	pus1	88	44.282	Gadus_morhua
ENSCING00000009426	-	91	44.868	ENSGALG00000002354	PUS1	83	44.868	Gallus_gallus
ENSCING00000009426	-	91	44.606	ENSGAFG00000006578	pus1	82	44.606	Gambusia_affinis
ENSCING00000009426	-	92	44.798	ENSGACG00000017566	pus1	88	44.798	Gasterosteus_aculeatus
ENSCING00000009426	-	89	43.413	ENSGAGG00000016730	-	91	44.340	Gopherus_agassizii
ENSCING00000009426	-	91	42.982	ENSGGOG00000009178	PUS1	87	41.975	Gorilla_gorilla
ENSCING00000009426	-	91	45.190	ENSHBUG00000001316	pus1	88	45.190	Haplochromis_burtoni
ENSCING00000009426	-	91	43.567	ENSHGLG00000016086	PUS1	88	43.567	Heterocephalus_glaber_female
ENSCING00000009426	-	91	43.275	ENSHGLG00100019362	PUS1	88	43.275	Heterocephalus_glaber_male
ENSCING00000009426	-	91	44.606	ENSHCOG00000014288	pus1	79	44.606	Hippocampus_comes
ENSCING00000009426	-	89	45.536	ENSIPUG00000010387	pus1	83	46.319	Ictalurus_punctatus
ENSCING00000009426	-	93	44.160	ENSSTOG00000011245	PUS1	84	43.697	Ictidomys_tridecemlineatus
ENSCING00000009426	-	85	45.625	ENSJJAG00000000088	Pus1	76	45.625	Jaculus_jaculus
ENSCING00000009426	-	87	46.177	ENSKMAG00000012702	pus1	78	46.177	Kryptolebias_marmoratus
ENSCING00000009426	-	87	44.343	ENSLBEG00000002845	pus1	81	44.343	Labrus_bergylta
ENSCING00000009426	-	90	46.018	ENSLACG00000018598	PUS1	87	45.429	Latimeria_chalumnae
ENSCING00000009426	-	85	42.138	ENSLACG00000016044	-	96	42.138	Latimeria_chalumnae
ENSCING00000009426	-	91	46.064	ENSLOCG00000006127	pus1	87	46.064	Lepisosteus_oculatus
ENSCING00000009426	-	86	43.789	ENSLAFG00000028731	PUS1	87	43.789	Loxodonta_africana
ENSCING00000009426	-	94	42.535	ENSMFAG00000041194	PUS1	89	41.975	Macaca_fascicularis
ENSCING00000009426	-	89	43.582	ENSMMUG00000031463	PUS1	87	43.092	Macaca_mulatta
ENSCING00000009426	-	94	42.535	ENSMNEG00000002814	PUS1	89	41.975	Macaca_nemestrina
ENSCING00000009426	-	86	41.975	ENSMLEG00000043560	PUS1	98	42.056	Mandrillus_leucophaeus
ENSCING00000009426	-	89	44.807	ENSMAMG00000007371	pus1	80	44.807	Mastacembelus_armatus
ENSCING00000009426	-	91	45.190	ENSMZEG00005017746	pus1	81	45.190	Maylandia_zebra
ENSCING00000009426	-	86	44.410	ENSMGAG00000001958	PUS1	98	44.410	Meleagris_gallopavo
ENSCING00000009426	-	59	31.250	ENSMGAG00000000851	PUS3	57	31.250	Meleagris_gallopavo
ENSCING00000009426	-	95	43.575	ENSMAUG00000001482	Pus1	84	43.575	Mesocricetus_auratus
ENSCING00000009426	-	89	44.186	ENSMICG00000030980	PUS1	86	44.186	Microcebus_murinus
ENSCING00000009426	-	95	43.978	ENSMOCG00000022311	Pus1	90	38.655	Microtus_ochrogaster
ENSCING00000009426	-	94	43.417	ENSMMOG00000021022	pus1	89	43.931	Mola_mola
ENSCING00000009426	-	85	45.912	ENSMODG00000015551	PUS1	75	44.643	Monodelphis_domestica
ENSCING00000009426	-	91	44.152	ENSMALG00000013202	pus1	80	45.289	Monopterus_albus
ENSCING00000009426	-	95	43.855	MGP_CAROLIEiJ_G0027551	Pus1	90	43.855	Mus_caroli
ENSCING00000009426	-	95	43.855	ENSMUSG00000029507	Pus1	90	43.855	Mus_musculus
ENSCING00000009426	-	95	43.575	MGP_PahariEiJ_G0024133	Pus1	90	43.575	Mus_pahari
ENSCING00000009426	-	95	43.855	MGP_SPRETEiJ_G0028549	Pus1	90	43.855	Mus_spretus
ENSCING00000009426	-	86	44.410	ENSMPUG00000002314	PUS1	82	44.410	Mustela_putorius_furo
ENSCING00000009426	-	88	42.773	ENSMLUG00000015790	PUS1	93	42.773	Myotis_lucifugus
ENSCING00000009426	-	86	45.031	ENSNGAG00000012976	Pus1	81	42.254	Nannospalax_galili
ENSCING00000009426	-	87	46.177	ENSNBRG00000020502	pus1	88	46.177	Neolamprologus_brichardi
ENSCING00000009426	-	94	41.690	ENSNLEG00000008505	PUS1	99	42.173	Nomascus_leucogenys
ENSCING00000009426	-	84	40.694	ENSMEUG00000002825	PUS1	86	40.694	Notamacropus_eugenii
ENSCING00000009426	-	86	38.700	ENSOPRG00000002701	-	85	38.700	Ochotona_princeps
ENSCING00000009426	-	90	43.323	ENSODEG00000008248	PUS1	89	43.323	Octodon_degus
ENSCING00000009426	-	91	44.540	ENSONIG00000003803	pus1	87	46.104	Oreochromis_niloticus
ENSCING00000009426	-	88	43.202	ENSOANG00000010619	PUS1	76	43.202	Ornithorhynchus_anatinus
ENSCING00000009426	-	85	44.025	ENSOCUG00000007310	PUS1	72	43.333	Oryctolagus_cuniculus
ENSCING00000009426	-	91	44.315	ENSORLG00000010787	pus1	82	44.315	Oryzias_latipes
ENSCING00000009426	-	91	43.732	ENSORLG00020011483	pus1	82	43.732	Oryzias_latipes_hni
ENSCING00000009426	-	91	43.732	ENSORLG00015023012	pus1	88	43.732	Oryzias_latipes_hsok
ENSCING00000009426	-	86	47.077	ENSOMEG00000022655	pus1	76	47.077	Oryzias_melastigma
ENSCING00000009426	-	85	45.768	ENSOGAG00000008720	PUS1	84	45.342	Otolemur_garnettii
ENSCING00000009426	-	94	43.182	ENSOARG00000013316	PUS1	81	43.182	Ovis_aries
ENSCING00000009426	-	91	42.982	ENSPPAG00000040971	PUS1	87	41.975	Pan_paniscus
ENSCING00000009426	-	89	44.048	ENSPPRG00000015456	PUS1	85	44.048	Panthera_pardus
ENSCING00000009426	-	85	45.283	ENSPTIG00000004201	PUS1	84	44.720	Panthera_tigris_altaica
ENSCING00000009426	-	91	42.982	ENSPTRG00000005643	PUS1	87	41.975	Pan_troglodytes
ENSCING00000009426	-	94	42.535	ENSPANG00000000376	PUS1	89	41.975	Papio_anubis
ENSCING00000009426	-	90	44.838	ENSPKIG00000019369	pus1	77	44.838	Paramormyrops_kingsleyae
ENSCING00000009426	-	89	46.108	ENSPSIG00000016432	PUS1	79	45.748	Pelodiscus_sinensis
ENSCING00000009426	-	87	44.343	ENSPMGG00000004522	pus1	87	43.791	Periophthalmus_magnuspinnatus
ENSCING00000009426	-	95	43.296	ENSPEMG00000013448	Pus1	84	43.296	Peromyscus_maniculatus_bairdii
ENSCING00000009426	-	85	45.141	ENSPMAG00000004636	pus1	97	45.141	Petromyzon_marinus
ENSCING00000009426	-	69	44.231	ENSPCIG00000022609	-	63	44.231	Phascolarctos_cinereus
ENSCING00000009426	-	87	45.872	ENSPFOG00000019669	pus1	78	45.872	Poecilia_formosa
ENSCING00000009426	-	87	46.177	ENSPLAG00000002692	-	78	46.177	Poecilia_latipinna
ENSCING00000009426	-	87	46.177	ENSPLAG00000007185	pus1	78	46.177	Poecilia_latipinna
ENSCING00000009426	-	87	45.872	ENSPMEG00000006038	pus1	81	45.872	Poecilia_mexicana
ENSCING00000009426	-	87	45.872	ENSPMEG00000011115	PUS1	79	45.872	Poecilia_mexicana
ENSCING00000009426	-	87	45.872	ENSPREG00000007231	pus1	91	45.872	Poecilia_reticulata
ENSCING00000009426	-	94	42.817	ENSPPYG00000005132	PUS1	83	42.817	Pongo_abelii
ENSCING00000009426	-	67	45.238	ENSPCAG00000009110	-	61	45.238	Procavia_capensis
ENSCING00000009426	-	85	41.066	ENSPCOG00000015595	PUS1	83	39.466	Propithecus_coquereli
ENSCING00000009426	-	91	44.898	ENSPNYG00000013571	pus1	81	44.898	Pundamilia_nyererei
ENSCING00000009426	-	88	45.482	ENSPNAG00000003938	pus1	79	45.482	Pygocentrus_nattereri
ENSCING00000009426	-	95	43.575	ENSRNOG00000037500	Pus1	84	43.575	Rattus_norvegicus
ENSCING00000009426	-	94	42.817	ENSRBIG00000043177	PUS1	90	42.284	Rhinopithecus_bieti
ENSCING00000009426	-	94	42.817	ENSRROG00000039744	PUS1	92	40.317	Rhinopithecus_roxellana
ENSCING00000009426	-	81	39.157	YPL212C	-	58	39.157	Saccharomyces_cerevisiae
ENSCING00000009426	-	88	44.578	ENSSBOG00000023593	PUS1	87	43.377	Saimiri_boliviensis_boliviensis
ENSCING00000009426	-	91	45.000	ENSSHAG00000013193	PUS1	82	45.000	Sarcophilus_harrisii
ENSCING00000009426	-	87	46.012	ENSSFOG00015003463	pus1	77	45.058	Scleropages_formosus
ENSCING00000009426	-	91	45.773	ENSSMAG00000019075	pus1	81	45.773	Scophthalmus_maximus
ENSCING00000009426	-	91	43.732	ENSSDUG00000007102	pus1	81	43.732	Seriola_dumerili
ENSCING00000009426	-	91	44.023	ENSSLDG00000022850	pus1	81	44.023	Seriola_lalandi_dorsalis
ENSCING00000009426	-	80	38.538	ENSSARG00000008367	PUS1	97	38.538	Sorex_araneus
ENSCING00000009426	-	94	43.059	ENSSPUG00000010009	PUS1	88	43.059	Sphenodon_punctatus
ENSCING00000009426	-	86	46.440	ENSSPAG00000006272	pus1	82	46.729	Stegastes_partitus
ENSCING00000009426	-	95	42.179	ENSSSCG00000009741	PUS1	89	42.179	Sus_scrofa
ENSCING00000009426	-	86	46.894	ENSTGUG00000008068	PUS1	98	46.894	Taeniopygia_guttata
ENSCING00000009426	-	88	43.675	ENSTRUG00000002198	pus1	85	43.675	Takifugu_rubripes
ENSCING00000009426	-	88	44.277	ENSTNIG00000003942	pus1	84	44.578	Tetraodon_nigroviridis
ENSCING00000009426	-	90	43.491	ENSTTRG00000000632	PUS1	79	43.491	Tursiops_truncatus
ENSCING00000009426	-	90	43.491	ENSUAMG00000017197	PUS1	85	43.491	Ursus_americanus
ENSCING00000009426	-	90	43.491	ENSUMAG00000002831	PUS1	95	43.949	Ursus_maritimus
ENSCING00000009426	-	86	44.720	ENSVVUG00000004199	PUS1	74	44.720	Vulpes_vulpes
ENSCING00000009426	-	85	36.991	ENSXETG00000033640	-	99	36.991	Xenopus_tropicalis
ENSCING00000009426	-	87	46.154	ENSXETG00000002030	pus1	81	46.154	Xenopus_tropicalis
ENSCING00000009426	-	91	44.898	ENSXCOG00000004722	pus1	89	44.898	Xiphophorus_couchianus
ENSCING00000009426	-	91	44.606	ENSXMAG00000000988	pus1	82	44.606	Xiphophorus_maculatus