EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009504 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6422 bases
Position: chr3:1934969-1941390
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019351	Methyltr_RsmB-F	PF01189.17	3e-39	1	1
ENSCINP00000019352	Methyltr_RsmB-F	PF01189.17	3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019352	-	1962	-	ENSCINP00000019352	654 (aa)	-	F6XKA2
ENSCINT00000019351	-	1947	-	ENSCINP00000019351	649 (aa)	-	F6XKB7

Gene Model

Click here to download ENSCING00000009504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009504	-	100	48.824	ENSG00000037474	NSUN2	88	48.824	Homo_sapiens
ENSCING00000009504	-	99	48.321	ENSAPOG00000000894	nsun2	84	48.321	Acanthochromis_polyacanthus
ENSCING00000009504	-	100	48.525	ENSAMEG00000002744	NSUN2	87	48.525	Ailuropoda_melanoleuca
ENSCING00000009504	-	99	47.156	ENSACIG00000013142	nsun2	88	47.006	Amphilophus_citrinellus
ENSCING00000009504	-	99	48.463	ENSAOCG00000019227	nsun2	88	48.463	Amphiprion_ocellaris
ENSCING00000009504	-	99	48.609	ENSAPEG00000002772	nsun2	88	48.609	Amphiprion_percula
ENSCING00000009504	-	99	48.088	ENSATEG00000006961	nsun2	88	48.088	Anabas_testudineus
ENSCING00000009504	-	93	47.604	ENSAPLG00000011518	NSUN2	87	47.604	Anas_platyrhynchos
ENSCING00000009504	-	100	48.198	ENSACAG00000000677	NSUN2	81	48.198	Anolis_carolinensis
ENSCING00000009504	-	100	48.378	ENSANAG00000034451	NSUN2	91	48.686	Aotus_nancymaae
ENSCING00000009504	-	99	46.852	ENSACLG00000014258	nsun2	88	46.501	Astatotilapia_calliptera
ENSCING00000009504	-	99	48.286	ENSAMXG00000017682	nsun2	91	48.367	Astyanax_mexicanus
ENSCING00000009504	-	100	48.521	ENSBTAG00000015466	NSUN2	86	48.521	Bos_taurus
ENSCING00000009504	-	99	38.015	WBGene00021686	Y48G8AL.5	86	38.015	Caenorhabditis_elegans
ENSCING00000009504	-	100	48.311	ENSCJAG00000008689	NSUN2	62	48.311	Callithrix_jacchus
ENSCING00000009504	-	100	48.301	ENSCAFG00000010334	NSUN2	86	48.301	Canis_familiaris
ENSCING00000009504	-	95	48.527	ENSCAFG00020022862	NSUN2	90	48.527	Canis_lupus_dingo
ENSCING00000009504	-	100	48.820	ENSCHIG00000019385	NSUN2	91	48.817	Capra_hircus
ENSCING00000009504	-	100	48.225	ENSTSYG00000005709	NSUN2	88	48.225	Carlito_syrichta
ENSCING00000009504	-	88	49.082	ENSCAPG00000013519	NSUN2	91	49.082	Cavia_aperea
ENSCING00000009504	-	100	48.077	ENSCPOG00000008196	NSUN2	88	48.454	Cavia_porcellus
ENSCING00000009504	-	100	48.449	ENSCCAG00000025648	-	88	47.744	Cebus_capucinus
ENSCING00000009504	-	82	47.687	ENSCCAG00000034245	-	88	47.276	Cebus_capucinus
ENSCING00000009504	-	100	48.949	ENSCATG00000042165	-	90	48.949	Cercocebus_atys
ENSCING00000009504	-	100	48.964	ENSCATG00000045020	-	88	48.964	Cercocebus_atys
ENSCING00000009504	-	99	45.870	ENSCLAG00000003188	NSUN2	92	48.068	Chinchilla_lanigera
ENSCING00000009504	-	100	48.964	ENSCSAG00000017339	NSUN2	88	48.964	Chlorocebus_sabaeus
ENSCING00000009504	-	65	51.598	ENSCHOG00000003644	NSUN2	76	51.598	Choloepus_hoffmanni
ENSCING00000009504	-	100	47.697	ENSCPBG00000006615	NSUN2	88	48.598	Chrysemys_picta_bellii
ENSCING00000009504	-	100	82.154	ENSCSAVG00000001710	-	99	79.630	Ciona_savignyi
ENSCING00000009504	-	100	48.964	ENSCANG00000029527	NSUN2	90	48.964	Colobus_angolensis_palliatus
ENSCING00000009504	-	100	48.235	ENSCGRG00001003947	Nsun2	89	48.235	Cricetulus_griseus_chok1gshd
ENSCING00000009504	-	100	48.235	ENSCGRG00000005703	Nsun2	93	47.710	Cricetulus_griseus_crigri
ENSCING00000009504	-	95	46.948	ENSCVAG00000021836	nsun2	92	46.948	Cyprinodon_variegatus
ENSCING00000009504	-	99	48.154	ENSDARG00000056665	nsun2	91	47.840	Danio_rerio
ENSCING00000009504	-	95	48.212	ENSDNOG00000013848	NSUN2	93	48.056	Dasypus_novemcinctus
ENSCING00000009504	-	100	48.968	ENSDORG00000010247	Nsun2	92	49.459	Dipodomys_ordii
ENSCING00000009504	-	99	42.145	FBgn0026079	Nsun2	86	42.145	Drosophila_melanogaster
ENSCING00000009504	-	100	40.813	ENSETEG00000000983	NSUN2	88	40.813	Echinops_telfairi
ENSCING00000009504	-	99	41.088	ENSEBUG00000006751	nsun2	82	41.088	Eptatretus_burgeri
ENSCING00000009504	-	100	48.230	ENSEASG00005018580	NSUN2	89	48.083	Equus_asinus_asinus
ENSCING00000009504	-	100	48.378	ENSECAG00000016357	NSUN2	89	47.935	Equus_caballus
ENSCING00000009504	-	71	44.124	ENSEEUG00000001691	NSUN2	98	44.124	Erinaceus_europaeus
ENSCING00000009504	-	99	47.781	ENSELUG00000024082	nsun2	87	47.781	Esox_lucius
ENSCING00000009504	-	100	49.325	ENSFCAG00000015602	NSUN2	88	49.325	Felis_catus
ENSCING00000009504	-	100	46.912	ENSFALG00000007188	NSUN2	85	47.478	Ficedula_albicollis
ENSCING00000009504	-	99	47.024	ENSFDAG00000003589	NSUN2	94	47.024	Fukomys_damarensis
ENSCING00000009504	-	99	47.438	ENSFHEG00000017930	nsun2	88	47.647	Fundulus_heteroclitus
ENSCING00000009504	-	73	42.094	ENSGMOG00000008921	nsun2	99	43.326	Gadus_morhua
ENSCING00000009504	-	100	48.137	ENSGALG00000013064	NSUN2	84	48.137	Gallus_gallus
ENSCING00000009504	-	99	48.363	ENSGAFG00000018743	nsun2	89	48.291	Gambusia_affinis
ENSCING00000009504	-	95	47.077	ENSGACG00000008974	nsun2	99	47.231	Gasterosteus_aculeatus
ENSCING00000009504	-	100	48.777	ENSGAGG00000015773	NSUN2	91	48.777	Gopherus_agassizii
ENSCING00000009504	-	100	48.971	ENSGGOG00000016583	NSUN2	88	48.971	Gorilla_gorilla
ENSCING00000009504	-	99	46.706	ENSHBUG00000022199	nsun2	88	46.706	Haplochromis_burtoni
ENSCING00000009504	-	100	47.556	ENSHGLG00000013825	NSUN2	89	47.781	Heterocephalus_glaber_female
ENSCING00000009504	-	99	47.259	ENSHGLG00100013746	NSUN2	99	47.259	Heterocephalus_glaber_male
ENSCING00000009504	-	99	48.597	ENSHCOG00000020484	nsun2	88	48.744	Hippocampus_comes
ENSCING00000009504	-	99	48.494	ENSIPUG00000014849	nsun2	87	48.576	Ictalurus_punctatus
ENSCING00000009504	-	100	48.597	ENSSTOG00000004090	NSUN2	88	48.597	Ictidomys_tridecemlineatus
ENSCING00000009504	-	100	48.593	ENSJJAG00000013996	Nsun2	88	48.593	Jaculus_jaculus
ENSCING00000009504	-	99	48.936	ENSKMAG00000000810	nsun2	89	47.085	Kryptolebias_marmoratus
ENSCING00000009504	-	99	47.871	ENSLBEG00000025697	nsun2	88	48.029	Labrus_bergylta
ENSCING00000009504	-	99	49.474	ENSLOCG00000008755	nsun2	86	49.474	Lepisosteus_oculatus
ENSCING00000009504	-	100	47.345	ENSLAFG00000009411	NSUN2	93	47.345	Loxodonta_africana
ENSCING00000009504	-	100	48.964	ENSMFAG00000045240	NSUN2	88	48.964	Macaca_fascicularis
ENSCING00000009504	-	100	48.964	ENSMMUG00000002561	NSUN2	88	48.964	Macaca_mulatta
ENSCING00000009504	-	100	48.964	ENSMNEG00000033485	NSUN2	88	48.964	Macaca_nemestrina
ENSCING00000009504	-	100	48.964	ENSMLEG00000017173	NSUN2	91	48.964	Mandrillus_leucophaeus
ENSCING00000009504	-	99	47.101	ENSMAMG00000004850	nsun2	88	47.101	Mastacembelus_armatus
ENSCING00000009504	-	99	46.852	ENSMZEG00005000101	nsun2	88	46.501	Maylandia_zebra
ENSCING00000009504	-	100	48.143	ENSMGAG00000006349	NSUN2	87	48.214	Meleagris_gallopavo
ENSCING00000009504	-	100	48.306	ENSMAUG00000014207	Nsun2	89	48.306	Mesocricetus_auratus
ENSCING00000009504	-	100	48.230	ENSMICG00000016549	NSUN2	83	48.230	Microcebus_murinus
ENSCING00000009504	-	100	48.661	ENSMOCG00000009613	Nsun2	89	48.661	Microtus_ochrogaster
ENSCING00000009504	-	99	48.820	ENSMMOG00000021188	nsun2	89	49.112	Mola_mola
ENSCING00000009504	-	100	47.965	ENSMODG00000002039	NSUN2	85	47.965	Monodelphis_domestica
ENSCING00000009504	-	99	49.770	ENSMALG00000002740	nsun2	88	49.770	Monopterus_albus
ENSCING00000009504	-	100	49.037	MGP_CAROLIEiJ_G0018690	Nsun2	89	49.037	Mus_caroli
ENSCING00000009504	-	100	48.669	ENSMUSG00000021595	Nsun2	92	49.226	Mus_musculus
ENSCING00000009504	-	100	48.744	MGP_PahariEiJ_G0015771	Nsun2	92	49.381	Mus_pahari
ENSCING00000009504	-	100	48.378	MGP_SPRETEiJ_G0019574	Nsun2	92	48.916	Mus_spretus
ENSCING00000009504	-	95	48.527	ENSMPUG00000007561	NSUN2	89	48.527	Mustela_putorius_furo
ENSCING00000009504	-	100	48.083	ENSMLUG00000009609	NSUN2	88	48.083	Myotis_lucifugus
ENSCING00000009504	-	100	47.774	ENSNGAG00000007424	Nsun2	89	47.774	Nannospalax_galili
ENSCING00000009504	-	100	48.673	ENSNLEG00000011344	NSUN2	88	48.529	Nomascus_leucogenys
ENSCING00000009504	-	87	47.966	ENSOPRG00000011324	NSUN2	92	47.966	Ochotona_princeps
ENSCING00000009504	-	100	48.164	ENSODEG00000018305	NSUN2	98	46.006	Octodon_degus
ENSCING00000009504	-	99	47.697	ENSONIG00000007761	nsun2	88	47.697	Oreochromis_niloticus
ENSCING00000009504	-	95	47.958	ENSOANG00000009243	NSUN2	88	47.958	Ornithorhynchus_anatinus
ENSCING00000009504	-	90	48.455	ENSOCUG00000007918	NSUN2	91	48.455	Oryctolagus_cuniculus
ENSCING00000009504	-	99	48.605	ENSORLG00000014332	nsun2	88	48.820	Oryzias_latipes
ENSCING00000009504	-	99	48.752	ENSORLG00020019799	nsun2	88	48.752	Oryzias_latipes_hni
ENSCING00000009504	-	99	48.899	ENSORLG00015007992	nsun2	91	48.773	Oryzias_latipes_hsok
ENSCING00000009504	-	99	48.576	ENSOMEG00000013504	nsun2	88	48.576	Oryzias_melastigma
ENSCING00000009504	-	100	47.717	ENSOGAG00000015015	NSUN2	87	47.717	Otolemur_garnettii
ENSCING00000009504	-	100	48.240	ENSOARG00000015042	NSUN2	86	48.240	Ovis_aries
ENSCING00000009504	-	100	48.971	ENSPPAG00000036124	NSUN2	88	48.971	Pan_paniscus
ENSCING00000009504	-	100	49.251	ENSPPRG00000001946	NSUN2	88	49.251	Panthera_pardus
ENSCING00000009504	-	100	46.188	ENSPTIG00000013257	NSUN2	95	45.522	Panthera_tigris_altaica
ENSCING00000009504	-	100	48.971	ENSPTRG00000016715	NSUN2	88	48.971	Pan_troglodytes
ENSCING00000009504	-	100	48.964	ENSPANG00000004215	NSUN2	88	48.964	Papio_anubis
ENSCING00000009504	-	99	49.155	ENSPKIG00000024200	nsun2	86	49.160	Paramormyrops_kingsleyae
ENSCING00000009504	-	92	47.680	ENSPSIG00000015282	NSUN2	86	47.680	Pelodiscus_sinensis
ENSCING00000009504	-	99	44.444	ENSPMGG00000004138	nsun2	90	44.889	Periophthalmus_magnuspinnatus
ENSCING00000009504	-	100	47.788	ENSPEMG00000021790	Nsun2	89	47.788	Peromyscus_maniculatus_bairdii
ENSCING00000009504	-	100	48.905	ENSPCIG00000011853	NSUN2	85	48.905	Phascolarctos_cinereus
ENSCING00000009504	-	99	47.768	ENSPFOG00000004139	nsun2	89	48.143	Poecilia_formosa
ENSCING00000009504	-	99	47.704	ENSPLAG00000007091	nsun2	92	47.988	Poecilia_latipinna
ENSCING00000009504	-	99	47.917	ENSPMEG00000000122	nsun2	89	48.291	Poecilia_mexicana
ENSCING00000009504	-	99	48.955	ENSPREG00000017479	nsun2	89	48.955	Poecilia_reticulata
ENSCING00000009504	-	100	48.824	ENSPPYG00000015332	NSUN2	88	48.824	Pongo_abelii
ENSCING00000009504	-	81	47.500	ENSPCAG00000010931	NSUN2	73	47.500	Procavia_capensis
ENSCING00000009504	-	100	45.266	ENSPCOG00000012979	NSUN2	87	45.266	Propithecus_coquereli
ENSCING00000009504	-	100	47.050	ENSPVAG00000010643	NSUN2	90	47.050	Pteropus_vampyrus
ENSCING00000009504	-	99	46.793	ENSPNYG00000010677	nsun2	88	46.793	Pundamilia_nyererei
ENSCING00000009504	-	99	43.570	ENSPNAG00000006827	nsun2	89	44.109	Pygocentrus_nattereri
ENSCING00000009504	-	100	48.669	ENSRNOG00000017254	Nsun2	86	48.669	Rattus_norvegicus
ENSCING00000009504	-	100	48.964	ENSRBIG00000035794	NSUN2	88	48.964	Rhinopithecus_bieti
ENSCING00000009504	-	100	48.964	ENSRROG00000035277	NSUN2	88	48.964	Rhinopithecus_roxellana
ENSCING00000009504	-	96	39.655	YBL024W	NCL1	88	39.130	Saccharomyces_cerevisiae
ENSCING00000009504	-	100	48.525	ENSSBOG00000035262	NSUN2	88	47.744	Saimiri_boliviensis_boliviensis
ENSCING00000009504	-	100	48.035	ENSSHAG00000011056	NSUN2	94	48.035	Sarcophilus_harrisii
ENSCING00000009504	-	99	46.899	ENSSFOG00015001631	nsun2	86	46.899	Scleropages_formosus
ENSCING00000009504	-	99	47.598	ENSSMAG00000020669	nsun2	88	47.654	Scophthalmus_maximus
ENSCING00000009504	-	99	48.534	ENSSDUG00000002080	nsun2	88	48.458	Seriola_dumerili
ENSCING00000009504	-	99	49.335	ENSSLDG00000004496	nsun2	88	49.335	Seriola_lalandi_dorsalis
ENSCING00000009504	-	99	47.226	ENSSPUG00000008865	NSUN2	84	47.226	Sphenodon_punctatus
ENSCING00000009504	-	99	48.170	ENSSPAG00000003665	nsun2	88	48.316	Stegastes_partitus
ENSCING00000009504	-	100	47.710	ENSSSCG00000017104	NSUN2	84	47.710	Sus_scrofa
ENSCING00000009504	-	99	48.132	ENSTGUG00000007789	NSUN2	99	48.132	Taeniopygia_guttata
ENSCING00000009504	-	99	48.311	ENSTRUG00000011788	nsun2	89	48.311	Takifugu_rubripes
ENSCING00000009504	-	99	48.597	ENSTNIG00000009258	nsun2	92	48.597	Tetraodon_nigroviridis
ENSCING00000009504	-	100	44.018	ENSTBEG00000014695	NSUN2	91	44.018	Tupaia_belangeri
ENSCING00000009504	-	100	45.575	ENSTTRG00000012662	NSUN2	88	45.575	Tursiops_truncatus
ENSCING00000009504	-	100	48.000	ENSUAMG00000024741	NSUN2	84	53.933	Ursus_americanus
ENSCING00000009504	-	100	44.378	ENSUMAG00000021149	NSUN2	90	49.224	Ursus_maritimus
ENSCING00000009504	-	51	58.006	ENSVPAG00000005110	-	66	58.006	Vicugna_pacos
ENSCING00000009504	-	95	48.758	ENSVVUG00000017691	NSUN2	90	48.758	Vulpes_vulpes
ENSCING00000009504	-	99	45.938	ENSXETG00000001732	nsun2	84	45.938	Xenopus_tropicalis
ENSCING00000009504	-	99	48.126	ENSXCOG00000002584	nsun2	88	48.220	Xiphophorus_couchianus
ENSCING00000009504	-	99	47.768	ENSXMAG00000013597	nsun2	89	47.697	Xiphophorus_maculatus