EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009513 (Gene tree)
Gene ID: 100185662
Gene Symbol: -
Alias: -
Full Name: lysine--tRNA ligase
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5728 bases
Position: chr3:1979584-1985311
Accession: 100185662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019375	tRNA_anti-codon	PF01336.25	5.3e-13	1	1
ENSCINP00000019375	tRNA-synt_2	PF00152.20	9.9e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019375	-	2172	XM_002131947	ENSCINP00000019375	576 (aa)	XP_002131983	F6XJ08

Gene Model

Click here to download ENSCING00000009513's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009513	-	97	68.772	ENSG00000065427	KARS	100	75.490	Homo_sapiens
ENSCING00000009513	-	100	68.056	ENSAPOG00000010997	kars	100	67.535	Acanthochromis_polyacanthus
ENSCING00000009513	-	96	66.904	ENSAMEG00000005347	KARS	82	70.703	Ailuropoda_melanoleuca
ENSCING00000009513	-	98	62.943	ENSACIG00000000304	kars	98	62.943	Amphilophus_citrinellus
ENSCING00000009513	-	97	67.384	ENSAOCG00000012971	kars	97	67.384	Amphiprion_ocellaris
ENSCING00000009513	-	98	68.078	ENSAPEG00000011144	kars	98	68.078	Amphiprion_percula
ENSCING00000009513	-	98	68.717	ENSATEG00000004954	kars	98	68.717	Anabas_testudineus
ENSCING00000009513	-	92	68.587	ENSAPLG00000012705	KARS	90	70.683	Anas_platyrhynchos
ENSCING00000009513	-	97	65.664	ENSACAG00000007577	KARS	89	66.021	Anolis_carolinensis
ENSCING00000009513	-	97	57.217	ENSANAG00000031739	-	91	57.217	Aotus_nancymaae
ENSCING00000009513	-	97	68.772	ENSANAG00000030403	-	95	68.607	Aotus_nancymaae
ENSCING00000009513	-	98	67.553	ENSACLG00000001613	kars	96	67.553	Astatotilapia_calliptera
ENSCING00000009513	-	98	68.007	ENSAMXG00000030719	kars	98	68.190	Astyanax_mexicanus
ENSCING00000009513	-	97	69.027	ENSBTAG00000015677	KARS	73	69.027	Bos_taurus
ENSCING00000009513	-	99	60.279	WBGene00002238	kars-1	99	62.573	Caenorhabditis_elegans
ENSCING00000009513	-	97	68.596	ENSCJAG00000014213	KARS	95	68.607	Callithrix_jacchus
ENSCING00000009513	-	98	67.539	ENSCAFG00000020069	KARS	83	71.319	Canis_familiaris
ENSCING00000009513	-	99	67.642	ENSCAFG00020001721	KARS	96	67.647	Canis_lupus_dingo
ENSCING00000009513	-	97	68.838	ENSCHIG00000014108	-	95	68.850	Capra_hircus
ENSCING00000009513	-	95	67.504	ENSCHIG00000016073	-	86	70.623	Capra_hircus
ENSCING00000009513	-	99	68.696	ENSTSYG00000001643	KARS	97	68.662	Carlito_syrichta
ENSCING00000009513	-	97	63.204	ENSCAPG00000016234	KARS	87	66.027	Cavia_aperea
ENSCING00000009513	-	98	68.000	ENSCPOG00000012036	KARS	96	67.832	Cavia_porcellus
ENSCING00000009513	-	93	54.779	ENSCCAG00000030337	-	99	54.713	Cebus_capucinus
ENSCING00000009513	-	97	68.772	ENSCCAG00000034307	-	95	68.783	Cebus_capucinus
ENSCING00000009513	-	97	68.070	ENSCATG00000038129	KARS	87	71.680	Cercocebus_atys
ENSCING00000009513	-	97	68.085	ENSCLAG00000007905	KARS	95	68.085	Chinchilla_lanigera
ENSCING00000009513	-	96	67.972	ENSCSAG00000003664	KARS	82	71.680	Chlorocebus_sabaeus
ENSCING00000009513	-	78	75.000	ENSCHOG00000013447	KARS	72	75.000	Choloepus_hoffmanni
ENSCING00000009513	-	94	63.536	ENSCPBG00000002553	-	95	65.085	Chrysemys_picta_bellii
ENSCING00000009513	-	99	69.056	ENSCPBG00000026969	KARS	96	68.881	Chrysemys_picta_bellii
ENSCING00000009513	-	56	86.997	ENSCSAVG00000001136	-	100	91.188	Ciona_savignyi
ENSCING00000009513	-	99	90.559	ENSCSAVG00000007684	-	99	90.559	Ciona_savignyi
ENSCING00000009513	-	97	65.439	ENSCANG00000032813	KARS	95	65.256	Colobus_angolensis_palliatus
ENSCING00000009513	-	97	68.850	ENSCGRG00001004055	KARS	95	69.381	Cricetulus_griseus_chok1gshd
ENSCING00000009513	-	97	68.850	ENSCGRG00000014242	KARS	95	69.381	Cricetulus_griseus_crigri
ENSCING00000009513	-	98	67.845	ENSCSEG00000008324	kars	98	67.845	Cynoglossus_semilaevis
ENSCING00000009513	-	99	67.832	ENSCVAG00000019686	kars	99	67.832	Cyprinodon_variegatus
ENSCING00000009513	-	100	67.418	ENSDARG00000103799	kars	99	70.097	Danio_rerio
ENSCING00000009513	-	96	68.683	ENSDNOG00000002241	KARS	82	72.656	Dasypus_novemcinctus
ENSCING00000009513	-	95	54.015	ENSDORG00000024214	-	94	54.015	Dipodomys_ordii
ENSCING00000009513	-	97	68.972	ENSDORG00000004780	-	95	68.972	Dipodomys_ordii
ENSCING00000009513	-	98	66.901	FBgn0027084	LysRS	99	66.842	Drosophila_melanogaster
ENSCING00000009513	-	96	67.914	ENSETEG00000008353	KARS	82	71.068	Echinops_telfairi
ENSCING00000009513	-	98	67.901	ENSEBUG00000001284	-	97	67.901	Eptatretus_burgeri
ENSCING00000009513	-	99	67.876	ENSEASG00005013497	KARS	96	67.708	Equus_asinus_asinus
ENSCING00000009513	-	99	67.876	ENSECAG00000013424	KARS	96	67.708	Equus_caballus
ENSCING00000009513	-	96	62.007	ENSEEUG00000007042	KARS	82	64.981	Erinaceus_europaeus
ENSCING00000009513	-	95	61.051	ENSELUG00000014575	kars	87	63.601	Esox_lucius
ENSCING00000009513	-	97	67.719	ENSFCAG00000008573	KARS	95	67.725	Felis_catus
ENSCING00000009513	-	99	68.439	ENSFALG00000002543	KARS	98	68.158	Ficedula_albicollis
ENSCING00000009513	-	97	68.254	ENSFDAG00000007155	KARS	95	68.262	Fukomys_damarensis
ENSCING00000009513	-	100	67.764	ENSFHEG00000006172	kars	100	67.764	Fundulus_heteroclitus
ENSCING00000009513	-	96	67.986	ENSGMOG00000002633	kars	84	71.206	Gadus_morhua
ENSCING00000009513	-	97	69.340	ENSGALG00000000907	KARS	99	68.496	Gallus_gallus
ENSCING00000009513	-	98	68.673	ENSGAFG00000017252	kars	98	68.673	Gambusia_affinis
ENSCING00000009513	-	98	66.081	ENSGACG00000015749	kars	96	66.081	Gasterosteus_aculeatus
ENSCING00000009513	-	99	67.832	ENSGAGG00000023836	KARS	96	67.657	Gopherus_agassizii
ENSCING00000009513	-	94	64.825	ENSGAGG00000011960	-	95	67.456	Gopherus_agassizii
ENSCING00000009513	-	97	68.596	ENSGGOG00000005515	KARS	95	68.607	Gorilla_gorilla
ENSCING00000009513	-	98	67.553	ENSHBUG00000013619	kars	96	67.553	Haplochromis_burtoni
ENSCING00000009513	-	97	61.552	ENSHGLG00000015235	-	95	61.525	Heterocephalus_glaber_female
ENSCING00000009513	-	97	56.842	ENSHGLG00000001298	-	94	56.316	Heterocephalus_glaber_female
ENSCING00000009513	-	97	69.014	ENSHGLG00000011898	KARS	95	68.673	Heterocephalus_glaber_female
ENSCING00000009513	-	97	69.014	ENSHGLG00100012264	KARS	95	68.673	Heterocephalus_glaber_male
ENSCING00000009513	-	97	61.376	ENSHGLG00100012523	-	95	61.348	Heterocephalus_glaber_male
ENSCING00000009513	-	97	56.667	ENSHGLG00100006466	-	94	56.140	Heterocephalus_glaber_male
ENSCING00000009513	-	98	68.021	ENSHCOG00000002900	kars	95	67.845	Hippocampus_comes
ENSCING00000009513	-	100	65.972	ENSIPUG00000009862	kars	100	65.972	Ictalurus_punctatus
ENSCING00000009513	-	97	68.607	ENSSTOG00000004205	KARS	95	68.440	Ictidomys_tridecemlineatus
ENSCING00000009513	-	97	68.430	ENSJJAG00000020406	Kars	96	68.440	Jaculus_jaculus
ENSCING00000009513	-	99	66.955	ENSKMAG00000006434	kars	100	66.955	Kryptolebias_marmoratus
ENSCING00000009513	-	98	67.314	ENSLBEG00000026537	kars	94	67.314	Labrus_bergylta
ENSCING00000009513	-	92	70.076	ENSLACG00000006667	KARS	91	67.776	Latimeria_chalumnae
ENSCING00000009513	-	89	67.906	ENSLACG00000016399	-	99	67.906	Latimeria_chalumnae
ENSCING00000009513	-	91	66.856	ENSLOCG00000013608	-	95	66.856	Lepisosteus_oculatus
ENSCING00000009513	-	97	69.519	ENSLOCG00000004002	kars	97	69.519	Lepisosteus_oculatus
ENSCING00000009513	-	96	67.794	ENSLAFG00000015340	KARS	83	71.068	Loxodonta_africana
ENSCING00000009513	-	97	67.895	ENSMFAG00000040024	KARS	95	67.725	Macaca_fascicularis
ENSCING00000009513	-	97	67.895	ENSMNEG00000042879	-	95	67.725	Macaca_nemestrina
ENSCING00000009513	-	85	65.139	ENSMNEG00000035832	-	96	64.930	Macaca_nemestrina
ENSCING00000009513	-	97	68.070	ENSMLEG00000034947	KARS	95	67.901	Mandrillus_leucophaeus
ENSCING00000009513	-	96	67.812	ENSMAMG00000021559	kars	85	70.213	Mastacembelus_armatus
ENSCING00000009513	-	98	67.553	ENSMZEG00005014382	kars	96	67.553	Maylandia_zebra
ENSCING00000009513	-	95	67.446	ENSMGAG00000009000	KARS	98	68.066	Meleagris_gallopavo
ENSCING00000009513	-	99	67.410	ENSMICG00000011997	KARS	97	67.241	Microcebus_murinus
ENSCING00000009513	-	97	66.784	ENSMOCG00000019029	-	95	66.430	Microtus_ochrogaster
ENSCING00000009513	-	97	69.081	ENSMOCG00000011829	Kars	95	68.739	Microtus_ochrogaster
ENSCING00000009513	-	95	68.306	ENSMMOG00000016934	kars	98	68.306	Mola_mola
ENSCING00000009513	-	96	67.621	ENSMODG00000002215	-	89	70.898	Monodelphis_domestica
ENSCING00000009513	-	96	65.942	ENSMODG00000002238	-	84	69.922	Monodelphis_domestica
ENSCING00000009513	-	100	65.803	ENSMALG00000020858	kars	100	65.803	Monopterus_albus
ENSCING00000009513	-	95	60.338	MGP_CAROLIEiJ_G0031588	Kars	98	60.465	Mus_caroli
ENSCING00000009513	-	99	67.863	ENSMUSG00000031948	Kars	98	67.698	Mus_musculus
ENSCING00000009513	-	99	67.350	MGP_PahariEiJ_G0023186	Kars	98	67.010	Mus_pahari
ENSCING00000009513	-	99	67.863	MGP_SPRETEiJ_G0032706	Kars	98	67.698	Mus_spretus
ENSCING00000009513	-	96	68.327	ENSMPUG00000009871	KARS	82	72.266	Mustela_putorius_furo
ENSCING00000009513	-	98	68.531	ENSMLUG00000015119	-	95	68.366	Myotis_lucifugus
ENSCING00000009513	-	75	44.444	ENSMLUG00000026871	-	94	44.444	Myotis_lucifugus
ENSCING00000009513	-	97	68.905	ENSNGAG00000018820	-	95	68.739	Nannospalax_galili
ENSCING00000009513	-	94	67.269	ENSNGAG00000022944	-	94	67.091	Nannospalax_galili
ENSCING00000009513	-	98	67.730	ENSNBRG00000011098	kars	96	67.730	Neolamprologus_brichardi
ENSCING00000009513	-	97	68.596	ENSNLEG00000013072	KARS	95	68.607	Nomascus_leucogenys
ENSCING00000009513	-	96	66.184	ENSMEUG00000008684	KARS	87	67.864	Notamacropus_eugenii
ENSCING00000009513	-	98	67.365	ENSOPRG00000012544	KARS	86	70.611	Ochotona_princeps
ENSCING00000009513	-	96	50.181	ENSODEG00000009464	-	96	50.000	Octodon_degus
ENSCING00000009513	-	97	68.440	ENSODEG00000013099	-	95	67.908	Octodon_degus
ENSCING00000009513	-	98	67.730	ENSONIG00000005937	kars	97	67.730	Oreochromis_niloticus
ENSCING00000009513	-	97	67.553	ENSOANG00000008179	KARS	94	66.490	Ornithorhynchus_anatinus
ENSCING00000009513	-	97	64.894	ENSOCUG00000015553	KARS	94	64.894	Oryctolagus_cuniculus
ENSCING00000009513	-	96	67.329	ENSORLG00000007627	kars	93	67.329	Oryzias_latipes
ENSCING00000009513	-	98	68.078	ENSORLG00020010056	kars	93	67.626	Oryzias_latipes_hni
ENSCING00000009513	-	98	67.901	ENSORLG00015008179	kars	93	67.446	Oryzias_latipes_hsok
ENSCING00000009513	-	99	67.882	ENSOMEG00000001710	kars	99	67.652	Oryzias_melastigma
ENSCING00000009513	-	98	64.098	ENSOGAG00000005903	KARS	84	67.176	Otolemur_garnettii
ENSCING00000009513	-	92	66.852	ENSOARG00000006928	KARS	94	66.853	Ovis_aries
ENSCING00000009513	-	97	68.772	ENSPPAG00000036192	KARS	95	68.783	Pan_paniscus
ENSCING00000009513	-	97	67.368	ENSPPRG00000003027	KARS	95	67.372	Panthera_pardus
ENSCING00000009513	-	97	67.719	ENSPTIG00000008011	KARS	95	67.725	Panthera_tigris_altaica
ENSCING00000009513	-	97	68.947	ENSPTRG00000008364	KARS	95	68.959	Pan_troglodytes
ENSCING00000009513	-	97	68.070	ENSPANG00000024106	KARS	88	67.901	Papio_anubis
ENSCING00000009513	-	97	67.921	ENSPKIG00000009896	kars	96	67.921	Paramormyrops_kingsleyae
ENSCING00000009513	-	96	68.108	ENSPSIG00000009294	KARS	90	70.633	Pelodiscus_sinensis
ENSCING00000009513	-	90	67.050	ENSPSIG00000003041	-	96	67.050	Pelodiscus_sinensis
ENSCING00000009513	-	89	71.037	ENSPMGG00000006117	kars	91	71.037	Periophthalmus_magnuspinnatus
ENSCING00000009513	-	97	68.794	ENSPEMG00000012277	Kars	95	68.440	Peromyscus_maniculatus_bairdii
ENSCING00000009513	-	97	66.078	ENSPMAG00000008360	-	91	66.078	Petromyzon_marinus
ENSCING00000009513	-	97	68.662	ENSPCIG00000010761	-	95	68.319	Phascolarctos_cinereus
ENSCING00000009513	-	96	66.486	ENSPCIG00000025469	-	84	69.531	Phascolarctos_cinereus
ENSCING00000009513	-	98	67.730	ENSPFOG00000013253	kars	93	67.730	Poecilia_formosa
ENSCING00000009513	-	100	67.418	ENSPLAG00000004189	kars	100	67.418	Poecilia_latipinna
ENSCING00000009513	-	100	67.418	ENSPMEG00000015698	kars	100	67.418	Poecilia_mexicana
ENSCING00000009513	-	100	67.071	ENSPREG00000023179	kars	99	67.071	Poecilia_reticulata
ENSCING00000009513	-	96	68.327	ENSPPYG00000007567	KARS	82	72.266	Pongo_abelii
ENSCING00000009513	-	88	65.079	ENSPCAG00000010790	KARS	96	65.079	Procavia_capensis
ENSCING00000009513	-	99	63.763	ENSPCOG00000003166	KARS	85	74.130	Propithecus_coquereli
ENSCING00000009513	-	96	68.149	ENSPVAG00000006746	KARS	82	71.875	Pteropus_vampyrus
ENSCING00000009513	-	98	67.553	ENSPNYG00000013095	kars	96	67.553	Pundamilia_nyererei
ENSCING00000009513	-	98	68.366	ENSPNAG00000013828	kars	98	68.366	Pygocentrus_nattereri
ENSCING00000009513	-	98	66.151	ENSRNOG00000019456	Kars	85	69.868	Rattus_norvegicus
ENSCING00000009513	-	97	68.421	ENSRBIG00000030118	KARS	87	72.070	Rhinopithecus_bieti
ENSCING00000009513	-	96	68.384	ENSRROG00000041418	KARS	87	72.070	Rhinopithecus_roxellana
ENSCING00000009513	-	97	57.618	YDR037W	KRS1	96	57.043	Saccharomyces_cerevisiae
ENSCING00000009513	-	81	32.869	YNL073W	-	86	33.466	Saccharomyces_cerevisiae
ENSCING00000009513	-	97	68.421	ENSSBOG00000019255	KARS	95	68.430	Saimiri_boliviensis_boliviensis
ENSCING00000009513	-	96	64.273	ENSSHAG00000001359	-	89	67.057	Sarcophilus_harrisii
ENSCING00000009513	-	89	61.914	ENSSHAG00000009005	-	92	61.914	Sarcophilus_harrisii
ENSCING00000009513	-	96	57.782	ENSSHAG00000002050	-	83	60.308	Sarcophilus_harrisii
ENSCING00000009513	-	97	67.921	ENSSFOG00015014837	kars	95	69.943	Scleropages_formosus
ENSCING00000009513	-	98	66.784	ENSSMAG00000021441	kars	98	66.784	Scophthalmus_maximus
ENSCING00000009513	-	98	66.025	ENSSDUG00000001202	kars	98	66.961	Seriola_dumerili
ENSCING00000009513	-	89	70.646	ENSSLDG00000021220	kars	89	70.646	Seriola_lalandi_dorsalis
ENSCING00000009513	-	74	84.466	ENSSARG00000011493	KARS	68	84.466	Sorex_araneus
ENSCING00000009513	-	64	61.828	ENSSPUG00000000449	-	86	62.060	Sphenodon_punctatus
ENSCING00000009513	-	99	67.012	ENSSPUG00000004974	KARS	97	67.012	Sphenodon_punctatus
ENSCING00000009513	-	92	70.321	ENSSPAG00000020365	kars	91	70.321	Stegastes_partitus
ENSCING00000009513	-	97	68.246	ENSSSCG00000002704	KARS	95	68.254	Sus_scrofa
ENSCING00000009513	-	95	70.217	ENSTGUG00000008400	KARS	92	72.147	Taeniopygia_guttata
ENSCING00000009513	-	96	68.659	ENSTRUG00000017551	kars	91	69.510	Takifugu_rubripes
ENSCING00000009513	-	90	71.484	ENSTNIG00000009351	kars	92	71.023	Tetraodon_nigroviridis
ENSCING00000009513	-	95	53.929	ENSTBEG00000004610	KARS	78	62.500	Tupaia_belangeri
ENSCING00000009513	-	96	66.726	ENSTTRG00000001221	KARS	82	70.508	Tursiops_truncatus
ENSCING00000009513	-	97	67.196	ENSUAMG00000017557	KARS	95	67.196	Ursus_americanus
ENSCING00000009513	-	96	67.084	ENSUMAG00000014559	KARS	82	70.898	Ursus_maritimus
ENSCING00000009513	-	96	66.726	ENSVPAG00000003716	KARS	82	70.508	Vicugna_pacos
ENSCING00000009513	-	99	67.470	ENSVVUG00000024338	KARS	94	70.722	Vulpes_vulpes
ENSCING00000009513	-	97	67.266	ENSXETG00000003569	kars	95	67.266	Xenopus_tropicalis
ENSCING00000009513	-	97	67.800	ENSXCOG00000011313	kars	94	69.565	Xiphophorus_couchianus
ENSCING00000009513	-	100	67.591	ENSXMAG00000003191	kars	99	67.591	Xiphophorus_maculatus