EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009521 (Gene tree)
Gene ID: 100178525
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2361 bases
Position: chr3:2082058-2084418
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019387	Utp13	PF08625.11	3.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019387	-	2361	-	ENSCINP00000019387	786 (aa)	-	F6WWW4

Gene Model

Click here to download ENSCING00000009521's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009521	-	98	45.259	ENSG00000183751	TBL3	97	45.259	Homo_sapiens
ENSCING00000009521	-	99	46.077	ENSAPOG00000021308	tbl3	85	46.986	Acanthochromis_polyacanthus
ENSCING00000009521	-	98	44.981	ENSAMEG00000017654	TBL3	97	44.924	Ailuropoda_melanoleuca
ENSCING00000009521	-	98	46.348	ENSACIG00000007459	tbl3	98	46.348	Amphilophus_citrinellus
ENSCING00000009521	-	99	46.202	ENSAOCG00000000453	tbl3	86	46.067	Amphiprion_ocellaris
ENSCING00000009521	-	99	46.077	ENSAPEG00000010228	tbl3	99	45.943	Amphiprion_percula
ENSCING00000009521	-	99	46.758	ENSATEG00000024571	tbl3	93	47.497	Anabas_testudineus
ENSCING00000009521	-	92	46.685	ENSAPLG00000008515	TBL3	98	46.685	Anas_platyrhynchos
ENSCING00000009521	-	55	58.095	ENSACAG00000012119	-	78	58.095	Anolis_carolinensis
ENSCING00000009521	-	98	45.765	ENSANAG00000030472	TBL3	98	45.765	Aotus_nancymaae
ENSCING00000009521	-	99	45.943	ENSACLG00000027954	tbl3	97	44.458	Astatotilapia_calliptera
ENSCING00000009521	-	99	48.432	ENSAMXG00000042589	tbl3	85	49.793	Astyanax_mexicanus
ENSCING00000009521	-	98	45.638	ENSBTAG00000020366	TBL3	96	45.638	Bos_taurus
ENSCING00000009521	-	97	30.549	WBGene00013143	Y53C12B.1	98	30.549	Caenorhabditis_elegans
ENSCING00000009521	-	98	45.512	ENSCJAG00000015245	TBL3	97	45.512	Callithrix_jacchus
ENSCING00000009521	-	98	45.649	ENSCAFG00000019430	TBL3	98	45.649	Canis_familiaris
ENSCING00000009521	-	98	45.765	ENSCAFG00020026321	TBL3	98	45.765	Canis_lupus_dingo
ENSCING00000009521	-	98	45.386	ENSCHIG00000007747	TBL3	96	45.386	Capra_hircus
ENSCING00000009521	-	98	45.006	ENSTSYG00000036142	TBL3	97	45.006	Carlito_syrichta
ENSCING00000009521	-	99	42.356	ENSCAPG00000016762	TBL3	96	42.356	Cavia_aperea
ENSCING00000009521	-	98	45.063	ENSCPOG00000005998	TBL3	98	45.063	Cavia_porcellus
ENSCING00000009521	-	98	45.765	ENSCCAG00000034486	TBL3	97	45.765	Cebus_capucinus
ENSCING00000009521	-	98	45.259	ENSCATG00000031298	TBL3	97	45.259	Cercocebus_atys
ENSCING00000009521	-	98	45.696	ENSCLAG00000013342	TBL3	98	45.696	Chinchilla_lanigera
ENSCING00000009521	-	98	45.006	ENSCSAG00000011191	TBL3	97	45.006	Chlorocebus_sabaeus
ENSCING00000009521	-	100	46.552	ENSCPBG00000000253	TBL3	98	46.552	Chrysemys_picta_bellii
ENSCING00000009521	-	98	45.259	ENSCANG00000031169	TBL3	97	45.259	Colobus_angolensis_palliatus
ENSCING00000009521	-	98	45.512	ENSCGRG00001021817	Tbl3	98	45.512	Cricetulus_griseus_chok1gshd
ENSCING00000009521	-	98	45.512	ENSCGRG00000013364	Tbl3	98	45.512	Cricetulus_griseus_crigri
ENSCING00000009521	-	99	46.584	ENSCSEG00000015634	tbl3	99	44.868	Cynoglossus_semilaevis
ENSCING00000009521	-	99	47.000	ENSCVAG00000002720	tbl3	96	48.281	Cyprinodon_variegatus
ENSCING00000009521	-	99	41.915	ENSDARG00000052344	tbl3	88	42.537	Danio_rerio
ENSCING00000009521	-	88	32.581	ENSDNOG00000019996	TBL3	98	31.421	Dasypus_novemcinctus
ENSCING00000009521	-	98	45.478	ENSDORG00000007377	Tbl3	96	45.478	Dipodomys_ordii
ENSCING00000009521	-	97	30.038	FBgn0033454	CG1671	98	30.038	Drosophila_melanogaster
ENSCING00000009521	-	86	48.551	ENSETEG00000019403	TBL3	84	48.551	Echinops_telfairi
ENSCING00000009521	-	99	46.338	ENSEBUG00000003526	tbl3	90	46.438	Eptatretus_burgeri
ENSCING00000009521	-	98	45.765	ENSEASG00005004649	TBL3	97	45.765	Equus_asinus_asinus
ENSCING00000009521	-	98	45.765	ENSECAG00000019299	TBL3	97	45.765	Equus_caballus
ENSCING00000009521	-	85	47.391	ENSEEUG00000000761	-	60	46.908	Erinaceus_europaeus
ENSCING00000009521	-	97	45.759	ENSELUG00000007394	tbl3	96	45.759	Esox_lucius
ENSCING00000009521	-	99	45.511	ENSFCAG00000011740	TBL3	99	45.511	Felis_catus
ENSCING00000009521	-	99	46.366	ENSFALG00000003409	TBL3	98	46.375	Ficedula_albicollis
ENSCING00000009521	-	98	45.765	ENSFDAG00000007751	TBL3	98	45.765	Fukomys_damarensis
ENSCING00000009521	-	99	47.125	ENSFHEG00000002234	tbl3	86	47.059	Fundulus_heteroclitus
ENSCING00000009521	-	99	37.943	ENSGMOG00000011562	tbl3	99	42.662	Gadus_morhua
ENSCING00000009521	-	99	47.690	ENSGALG00000005558	TBL3	98	47.940	Gallus_gallus
ENSCING00000009521	-	99	46.058	ENSGAFG00000020165	tbl3	87	46.058	Gambusia_affinis
ENSCING00000009521	-	99	46.393	ENSGACG00000011960	tbl3	99	46.269	Gasterosteus_aculeatus
ENSCING00000009521	-	99	46.957	ENSGAGG00000024028	TBL3	98	46.957	Gopherus_agassizii
ENSCING00000009521	-	98	45.259	ENSGGOG00000009378	TBL3	97	45.259	Gorilla_gorilla
ENSCING00000009521	-	99	46.192	ENSHBUG00000011872	tbl3	97	46.443	Haplochromis_burtoni
ENSCING00000009521	-	99	45.603	ENSHGLG00000002431	TBL3	98	45.603	Heterocephalus_glaber_female
ENSCING00000009521	-	99	45.101	ENSHGLG00100012878	TBL3	98	45.101	Heterocephalus_glaber_male
ENSCING00000009521	-	99	46.144	ENSHCOG00000016689	tbl3	86	45.973	Hippocampus_comes
ENSCING00000009521	-	99	47.613	ENSIPUG00000003568	TBL3	87	47.613	Ictalurus_punctatus
ENSCING00000009521	-	98	45.512	ENSSTOG00000012964	TBL3	98	45.512	Ictidomys_tridecemlineatus
ENSCING00000009521	-	98	45.223	ENSJJAG00000004124	Tbl3	98	44.937	Jaculus_jaculus
ENSCING00000009521	-	99	46.375	ENSKMAG00000020117	tbl3	99	45.763	Kryptolebias_marmoratus
ENSCING00000009521	-	99	46.891	ENSLBEG00000026742	tbl3	86	46.964	Labrus_bergylta
ENSCING00000009521	-	99	46.494	ENSLACG00000000615	TBL3	99	47.756	Latimeria_chalumnae
ENSCING00000009521	-	99	48.875	ENSLOCG00000008853	tbl3	86	48.997	Lepisosteus_oculatus
ENSCING00000009521	-	98	44.571	ENSLAFG00000004699	TBL3	98	44.697	Loxodonta_africana
ENSCING00000009521	-	98	45.133	ENSMFAG00000030302	TBL3	97	45.133	Macaca_fascicularis
ENSCING00000009521	-	98	45.374	ENSMMUG00000007943	TBL3	98	45.374	Macaca_mulatta
ENSCING00000009521	-	98	44.880	ENSMNEG00000032603	TBL3	97	44.880	Macaca_nemestrina
ENSCING00000009521	-	98	45.547	ENSMLEG00000043359	TBL3	98	45.547	Mandrillus_leucophaeus
ENSCING00000009521	-	99	46.601	ENSMAMG00000023507	tbl3	86	46.601	Mastacembelus_armatus
ENSCING00000009521	-	99	46.192	ENSMZEG00005000630	tbl3	98	44.823	Maylandia_zebra
ENSCING00000009521	-	99	48.070	ENSMGAG00000005694	TBL3	98	48.319	Meleagris_gallopavo
ENSCING00000009521	-	98	45.638	ENSMAUG00000008718	Tbl3	98	45.638	Mesocricetus_auratus
ENSCING00000009521	-	98	44.823	ENSMICG00000012787	TBL3	86	44.823	Microcebus_murinus
ENSCING00000009521	-	99	45.682	ENSMOCG00000019634	Tbl3	99	45.682	Microtus_ochrogaster
ENSCING00000009521	-	98	46.500	ENSMMOG00000007551	tbl3	99	45.372	Mola_mola
ENSCING00000009521	-	99	46.926	ENSMODG00000016091	TBL3	98	46.926	Monodelphis_domestica
ENSCING00000009521	-	99	45.658	ENSMALG00000007013	tbl3	86	45.658	Monopterus_albus
ENSCING00000009521	-	98	45.638	MGP_CAROLIEiJ_G0021199	Tbl3	98	45.638	Mus_caroli
ENSCING00000009521	-	98	45.386	ENSMUSG00000040688	Tbl3	99	51.689	Mus_musculus
ENSCING00000009521	-	98	45.512	MGP_PahariEiJ_G0023516	Tbl3	98	45.512	Mus_pahari
ENSCING00000009521	-	98	45.386	MGP_SPRETEiJ_G0022110	Tbl3	100	51.689	Mus_spretus
ENSCING00000009521	-	99	45.056	ENSMPUG00000015545	TBL3	98	45.056	Mustela_putorius_furo
ENSCING00000009521	-	99	46.115	ENSMLUG00000011684	TBL3	99	46.115	Myotis_lucifugus
ENSCING00000009521	-	98	45.386	ENSNGAG00000002428	Tbl3	98	45.386	Nannospalax_galili
ENSCING00000009521	-	98	43.915	ENSNBRG00000003173	tbl3	97	43.915	Neolamprologus_brichardi
ENSCING00000009521	-	98	45.478	ENSNLEG00000008889	TBL3	97	45.190	Nomascus_leucogenys
ENSCING00000009521	-	92	41.949	ENSMEUG00000004011	TBL3	99	41.949	Notamacropus_eugenii
ENSCING00000009521	-	96	44.343	ENSOPRG00000002527	-	95	44.343	Ochotona_princeps
ENSCING00000009521	-	98	46.242	ENSODEG00000013930	TBL3	98	46.242	Octodon_degus
ENSCING00000009521	-	99	46.317	ENSONIG00000002319	tbl3	97	46.289	Oreochromis_niloticus
ENSCING00000009521	-	98	43.429	ENSOANG00000009819	TBL3	99	43.429	Ornithorhynchus_anatinus
ENSCING00000009521	-	99	46.941	ENSORLG00000009312	tbl3	94	46.941	Oryzias_latipes
ENSCING00000009521	-	99	46.816	ENSORLG00020017711	tbl3	94	46.816	Oryzias_latipes_hni
ENSCING00000009521	-	99	47.066	ENSORLG00015007004	tbl3	85	47.066	Oryzias_latipes_hsok
ENSCING00000009521	-	99	46.375	ENSOMEG00000012684	tbl3	96	45.432	Oryzias_melastigma
ENSCING00000009521	-	98	45.133	ENSOGAG00000010104	TBL3	97	45.133	Otolemur_garnettii
ENSCING00000009521	-	92	41.331	ENSOARG00000017059	TBL3	98	41.331	Ovis_aries
ENSCING00000009521	-	98	45.386	ENSPPAG00000041939	TBL3	97	45.386	Pan_paniscus
ENSCING00000009521	-	98	45.259	ENSPPRG00000000893	TBL3	98	45.259	Panthera_pardus
ENSCING00000009521	-	92	47.072	ENSPTIG00000010377	TBL3	97	47.289	Panthera_tigris_altaica
ENSCING00000009521	-	98	45.259	ENSPTRG00000007621	TBL3	97	45.259	Pan_troglodytes
ENSCING00000009521	-	98	45.006	ENSPANG00000007024	TBL3	97	45.006	Papio_anubis
ENSCING00000009521	-	99	47.191	ENSPKIG00000000136	tbl3	87	47.388	Paramormyrops_kingsleyae
ENSCING00000009521	-	98	46.550	ENSPSIG00000013024	TBL3	97	46.550	Pelodiscus_sinensis
ENSCING00000009521	-	98	47.163	ENSPMGG00000020660	tbl3	96	47.163	Periophthalmus_magnuspinnatus
ENSCING00000009521	-	98	45.802	ENSPEMG00000009768	Tbl3	98	45.908	Peromyscus_maniculatus_bairdii
ENSCING00000009521	-	84	45.609	ENSPMAG00000004860	tbl3	93	46.034	Petromyzon_marinus
ENSCING00000009521	-	99	45.671	ENSPCIG00000021811	TBL3	97	45.671	Phascolarctos_cinereus
ENSCING00000009521	-	99	46.058	ENSPFOG00000009834	tbl3	86	46.058	Poecilia_formosa
ENSCING00000009521	-	99	45.932	ENSPLAG00000016437	tbl3	86	45.932	Poecilia_latipinna
ENSCING00000009521	-	99	46.058	ENSPMEG00000019513	tbl3	86	46.058	Poecilia_mexicana
ENSCING00000009521	-	98	45.133	ENSPPYG00000006977	TBL3	97	45.133	Pongo_abelii
ENSCING00000009521	-	98	44.627	ENSPCOG00000019749	TBL3	97	44.627	Propithecus_coquereli
ENSCING00000009521	-	98	45.120	ENSPVAG00000016710	TBL3	98	45.120	Pteropus_vampyrus
ENSCING00000009521	-	97	44.219	ENSPNYG00000017137	tbl3	97	44.219	Pundamilia_nyererei
ENSCING00000009521	-	99	47.177	ENSPNAG00000017527	tbl3	98	46.581	Pygocentrus_nattereri
ENSCING00000009521	-	98	45.891	ENSRNOG00000013429	Tbl3	98	45.891	Rattus_norvegicus
ENSCING00000009521	-	98	42.298	ENSRBIG00000032982	TBL3	97	42.298	Rhinopithecus_bieti
ENSCING00000009521	-	98	45.133	ENSRROG00000026697	TBL3	97	45.133	Rhinopithecus_roxellana
ENSCING00000009521	-	98	45.512	ENSSBOG00000013923	TBL3	97	45.512	Saimiri_boliviensis_boliviensis
ENSCING00000009521	-	99	46.366	ENSSHAG00000015266	TBL3	97	46.366	Sarcophilus_harrisii
ENSCING00000009521	-	99	47.572	ENSSFOG00015023537	tbl3	85	47.572	Scleropages_formosus
ENSCING00000009521	-	99	46.708	ENSSMAG00000014338	tbl3	97	47.625	Scophthalmus_maximus
ENSCING00000009521	-	99	46.239	ENSSDUG00000008158	tbl3	86	46.239	Seriola_dumerili
ENSCING00000009521	-	99	46.230	ENSSLDG00000023733	tbl3	98	44.895	Seriola_lalandi_dorsalis
ENSCING00000009521	-	97	50.877	ENSSPUG00000012939	TBL3	98	50.877	Sphenodon_punctatus
ENSCING00000009521	-	99	46.517	ENSSPAG00000010659	tbl3	86	46.269	Stegastes_partitus
ENSCING00000009521	-	98	45.316	ENSSSCG00000037686	TBL3	98	45.133	Sus_scrofa
ENSCING00000009521	-	98	45.743	ENSTGUG00000006592	-	99	45.743	Taeniopygia_guttata
ENSCING00000009521	-	99	45.409	ENSTRUG00000007010	tbl3	86	45.725	Takifugu_rubripes
ENSCING00000009521	-	99	46.532	ENSTNIG00000018011	tbl3	98	46.532	Tetraodon_nigroviridis
ENSCING00000009521	-	52	48.366	ENSTBEG00000000017	-	52	48.366	Tupaia_belangeri
ENSCING00000009521	-	98	44.121	ENSTTRG00000011395	TBL3	97	44.121	Tursiops_truncatus
ENSCING00000009521	-	99	44.737	ENSUAMG00000019276	TBL3	98	44.681	Ursus_americanus
ENSCING00000009521	-	98	43.544	ENSUMAG00000022149	TBL3	96	43.473	Ursus_maritimus
ENSCING00000009521	-	99	45.489	ENSVVUG00000009589	TBL3	98	45.489	Vulpes_vulpes
ENSCING00000009521	-	99	40.887	ENSXETG00000007217	tbl3	96	40.887	Xenopus_tropicalis
ENSCING00000009521	-	99	46.308	ENSXCOG00000010277	tbl3	99	46.308	Xiphophorus_couchianus
ENSCING00000009521	-	99	46.259	ENSXMAG00000014866	tbl3	93	47.185	Xiphophorus_maculatus