EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009532 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6209 bases
Position: chr3:2190510-2196718
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019406	zf-CCCH	PF00642.24	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019406	-	3098	-	ENSCINP00000019406	842 (aa)	-	F6UXC7

Gene Model

Click here to download ENSCING00000009532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009532	-	67	38.021	ENSG00000122299	ZC3H7A	92	34.375	Homo_sapiens
ENSCING00000009532	-	64	39.162	ENSG00000100403	ZC3H7B	57	38.529	Homo_sapiens
ENSCING00000009532	-	67	37.241	ENSAMEG00000002171	ZC3H7B	57	37.241	Ailuropoda_melanoleuca
ENSCING00000009532	-	62	33.692	ENSACIG00000009388	ZC3H7B	81	33.871	Amphilophus_citrinellus
ENSCING00000009532	-	63	35.752	ENSATEG00000007908	ZC3H7B	51	35.929	Anabas_testudineus
ENSCING00000009532	-	64	37.273	ENSAPLG00000005880	ZC3H7B	53	37.273	Anas_platyrhynchos
ENSCING00000009532	-	65	40.107	ENSAPLG00000013636	ZC3H7A	55	39.216	Anas_platyrhynchos
ENSCING00000009532	-	70	36.529	ENSACAG00000004820	ZC3H7B	58	36.529	Anolis_carolinensis
ENSCING00000009532	-	67	37.931	ENSANAG00000026268	ZC3H7B	59	37.931	Aotus_nancymaae
ENSCING00000009532	-	67	38.021	ENSANAG00000035407	ZC3H7A	57	38.021	Aotus_nancymaae
ENSCING00000009532	-	61	35.676	ENSAMXG00000015389	zc3h7ba	62	35.676	Astyanax_mexicanus
ENSCING00000009532	-	67	37.478	ENSBTAG00000014826	ZC3H7A	58	37.478	Bos_taurus
ENSCING00000009532	-	67	37.759	ENSBTAG00000002782	ZC3H7B	58	37.759	Bos_taurus
ENSCING00000009532	-	67	37.847	ENSCJAG00000008403	ZC3H7A	57	37.847	Callithrix_jacchus
ENSCING00000009532	-	67	38.103	ENSCJAG00000004889	ZC3H7B	55	39.162	Callithrix_jacchus
ENSCING00000009532	-	67	37.759	ENSCAFG00020002005	ZC3H7B	57	38.112	Canis_lupus_dingo
ENSCING00000009532	-	67	37.306	ENSCHIG00000006568	ZC3H7A	57	37.306	Capra_hircus
ENSCING00000009532	-	67	37.694	ENSCHIG00000020469	ZC3H7B	59	37.586	Capra_hircus
ENSCING00000009532	-	67	38.287	ENSTSYG00000030241	ZC3H7B	57	38.287	Carlito_syrichta
ENSCING00000009532	-	62	36.667	ENSCAPG00000017095	ZC3H7B	53	36.667	Cavia_aperea
ENSCING00000009532	-	68	37.819	ENSCPOG00000004413	ZC3H7B	58	37.819	Cavia_porcellus
ENSCING00000009532	-	67	38.103	ENSCCAG00000027974	ZC3H7B	59	38.103	Cebus_capucinus
ENSCING00000009532	-	67	38.021	ENSCCAG00000030033	ZC3H7A	92	33.750	Cebus_capucinus
ENSCING00000009532	-	64	39.162	ENSCATG00000037774	ZC3H7B	55	39.162	Cercocebus_atys
ENSCING00000009532	-	67	38.021	ENSCATG00000039664	ZC3H7A	59	38.021	Cercocebus_atys
ENSCING00000009532	-	65	38.859	ENSCLAG00000015052	ZC3H7B	55	38.859	Chinchilla_lanigera
ENSCING00000009532	-	67	37.997	ENSCSAG00000008311	ZC3H7A	57	38.021	Chlorocebus_sabaeus
ENSCING00000009532	-	67	38.276	ENSCSAG00000005824	ZC3H7B	59	38.276	Chlorocebus_sabaeus
ENSCING00000009532	-	65	40.681	ENSCPBG00000006571	ZC3H7A	55	40.681	Chrysemys_picta_bellii
ENSCING00000009532	-	70	36.721	ENSCPBG00000020560	ZC3H7B	59	36.721	Chrysemys_picta_bellii
ENSCING00000009532	-	64	88.476	ENSCSAVG00000010311	-	100	88.476	Ciona_savignyi
ENSCING00000009532	-	64	39.162	ENSCANG00000032775	ZC3H7B	55	39.162	Colobus_angolensis_palliatus
ENSCING00000009532	-	67	38.021	ENSCANG00000035347	ZC3H7A	57	38.021	Colobus_angolensis_palliatus
ENSCING00000009532	-	67	38.368	ENSCGRG00001020639	Zc3h7a	57	38.368	Cricetulus_griseus_chok1gshd
ENSCING00000009532	-	67	37.586	ENSCGRG00001022924	Zc3h7b	57	37.586	Cricetulus_griseus_chok1gshd
ENSCING00000009532	-	67	38.368	ENSCGRG00000004146	Zc3h7a	57	38.368	Cricetulus_griseus_crigri
ENSCING00000009532	-	67	37.586	ENSCGRG00000005073	Zc3h7b	57	37.586	Cricetulus_griseus_crigri
ENSCING00000009532	-	64	35.304	ENSCSEG00000006655	ZC3H7B	51	35.304	Cynoglossus_semilaevis
ENSCING00000009532	-	64	36.097	ENSDARG00000098540	zc3h7ba	59	36.489	Danio_rerio
ENSCING00000009532	-	65	38.393	ENSDNOG00000007676	ZC3H7B	55	38.393	Dasypus_novemcinctus
ENSCING00000009532	-	67	38.169	ENSDNOG00000009621	ZC3H7A	57	38.169	Dasypus_novemcinctus
ENSCING00000009532	-	67	37.759	ENSDORG00000013794	Zc3h7b	58	38.112	Dipodomys_ordii
ENSCING00000009532	-	66	33.986	ENSEBUG00000016536	-	75	33.986	Eptatretus_burgeri
ENSCING00000009532	-	66	34.669	ENSEBUG00000014132	-	59	34.669	Eptatretus_burgeri
ENSCING00000009532	-	67	37.931	ENSEASG00005001577	ZC3H7B	58	37.931	Equus_asinus_asinus
ENSCING00000009532	-	64	38.909	ENSEASG00005011504	ZC3H7A	57	37.824	Equus_asinus_asinus
ENSCING00000009532	-	64	38.909	ENSECAG00000003869	ZC3H7A	54	38.909	Equus_caballus
ENSCING00000009532	-	67	37.931	ENSECAG00000010103	ZC3H7B	58	37.931	Equus_caballus
ENSCING00000009532	-	67	37.937	ENSEEUG00000008452	ZC3H7B	56	37.937	Erinaceus_europaeus
ENSCING00000009532	-	54	37.736	ENSEEUG00000014521	ZC3H7A	59	37.736	Erinaceus_europaeus
ENSCING00000009532	-	63	36.727	ENSELUG00000007682	ZC3H7B	65	36.909	Esox_lucius
ENSCING00000009532	-	67	37.759	ENSFCAG00000003670	ZC3H7B	58	37.759	Felis_catus
ENSCING00000009532	-	64	39.602	ENSFALG00000003931	ZC3H7A	54	39.602	Ficedula_albicollis
ENSCING00000009532	-	69	35.774	ENSFALG00000011968	ZC3H7B	57	35.774	Ficedula_albicollis
ENSCING00000009532	-	67	38.382	ENSFDAG00000009991	ZC3H7B	57	38.382	Fukomys_damarensis
ENSCING00000009532	-	70	35.294	ENSFHEG00000020629	ZC3H7B	69	35.131	Fundulus_heteroclitus
ENSCING00000009532	-	66	39.543	ENSGALG00000003143	ZC3H7A	56	39.543	Gallus_gallus
ENSCING00000009532	-	70	36.230	ENSGALG00000011965	ZC3H7B	58	36.230	Gallus_gallus
ENSCING00000009532	-	70	33.768	ENSGAFG00000010829	ZC3H7B	57	34.039	Gambusia_affinis
ENSCING00000009532	-	65	40.000	ENSGAGG00000013068	ZC3H7A	63	40.000	Gopherus_agassizii
ENSCING00000009532	-	70	36.721	ENSGAGG00000008803	ZC3H7B	59	36.721	Gopherus_agassizii
ENSCING00000009532	-	67	37.543	ENSGGOG00000009732	ZC3H7A	58	37.543	Gorilla_gorilla
ENSCING00000009532	-	67	38.103	ENSGGOG00000014138	ZC3H7B	57	38.529	Gorilla_gorilla
ENSCING00000009532	-	67	38.261	ENSHGLG00000008151	ZC3H7A	57	38.261	Heterocephalus_glaber_female
ENSCING00000009532	-	67	38.038	ENSHGLG00000012263	ZC3H7B	57	38.038	Heterocephalus_glaber_female
ENSCING00000009532	-	67	38.261	ENSHGLG00100015688	ZC3H7A	57	38.261	Heterocephalus_glaber_male
ENSCING00000009532	-	67	37.457	ENSHGLG00100007729	ZC3H7B	53	37.457	Heterocephalus_glaber_male
ENSCING00000009532	-	57	33.068	ENSHCOG00000014089	-	56	31.887	Hippocampus_comes
ENSCING00000009532	-	64	39.606	ENSHCOG00000006592	zc3h7a	54	39.606	Hippocampus_comes
ENSCING00000009532	-	64	36.489	ENSIPUG00000019805	zc3h7ba	62	36.489	Ictalurus_punctatus
ENSCING00000009532	-	67	38.045	ENSSTOG00000016196	ZC3H7B	57	38.045	Ictidomys_tridecemlineatus
ENSCING00000009532	-	67	38.021	ENSSTOG00000005596	ZC3H7A	57	38.021	Ictidomys_tridecemlineatus
ENSCING00000009532	-	67	38.287	ENSJJAG00000013804	Zc3h7b	57	38.287	Jaculus_jaculus
ENSCING00000009532	-	63	36.185	ENSKMAG00000014972	zc3h7ba	53	36.842	Kryptolebias_marmoratus
ENSCING00000009532	-	64	37.590	ENSLACG00000013040	ZC3H7B	54	37.590	Latimeria_chalumnae
ENSCING00000009532	-	75	30.062	ENSLOCG00000011588	zc3h7bb	65	30.062	Lepisosteus_oculatus
ENSCING00000009532	-	64	38.727	ENSLAFG00000004255	ZC3H7A	54	38.727	Loxodonta_africana
ENSCING00000009532	-	64	39.383	ENSMFAG00000037965	ZC3H7B	54	39.383	Macaca_fascicularis
ENSCING00000009532	-	67	38.021	ENSMFAG00000031501	ZC3H7A	58	38.021	Macaca_fascicularis
ENSCING00000009532	-	64	39.162	ENSMMUG00000005219	ZC3H7B	55	39.162	Macaca_mulatta
ENSCING00000009532	-	67	38.021	ENSMMUG00000011242	ZC3H7A	57	38.021	Macaca_mulatta
ENSCING00000009532	-	67	38.021	ENSMNEG00000035809	ZC3H7A	58	38.021	Macaca_nemestrina
ENSCING00000009532	-	64	39.162	ENSMNEG00000036730	ZC3H7B	55	39.162	Macaca_nemestrina
ENSCING00000009532	-	71	37.316	ENSMLEG00000037209	ZC3H7B	59	37.316	Mandrillus_leucophaeus
ENSCING00000009532	-	67	38.021	ENSMLEG00000031752	ZC3H7A	57	38.021	Mandrillus_leucophaeus
ENSCING00000009532	-	64	34.859	ENSMAMG00000007320	ZC3H7B	52	35.211	Mastacembelus_armatus
ENSCING00000009532	-	64	40.073	ENSMGAG00000001079	ZC3H7A	54	40.073	Meleagris_gallopavo
ENSCING00000009532	-	64	37.523	ENSMGAG00000012234	ZC3H7B	55	37.523	Meleagris_gallopavo
ENSCING00000009532	-	67	37.759	ENSMAUG00000007915	Zc3h7b	57	37.759	Mesocricetus_auratus
ENSCING00000009532	-	67	38.368	ENSMAUG00000000111	Zc3h7a	57	38.368	Mesocricetus_auratus
ENSCING00000009532	-	67	37.847	ENSMICG00000026523	ZC3H7A	57	37.847	Microcebus_murinus
ENSCING00000009532	-	67	38.112	ENSMICG00000013471	ZC3H7B	57	38.112	Microcebus_murinus
ENSCING00000009532	-	64	39.305	ENSMOCG00000016255	Zc3h7a	54	39.305	Microtus_ochrogaster
ENSCING00000009532	-	67	37.414	ENSMOCG00000014855	Zc3h7b	57	37.414	Microtus_ochrogaster
ENSCING00000009532	-	61	34.831	ENSMMOG00000002693	ZC3H7B	62	34.953	Mola_mola
ENSCING00000009532	-	67	37.434	ENSMODG00000016546	-	80	37.434	Monodelphis_domestica
ENSCING00000009532	-	83	32.210	ENSMALG00000013223	ZC3H7B	68	32.210	Monopterus_albus
ENSCING00000009532	-	67	37.414	MGP_CAROLIEiJ_G0020058	Zc3h7b	57	37.414	Mus_caroli
ENSCING00000009532	-	67	37.414	ENSMUSG00000022390	Zc3h7b	57	37.414	Mus_musculus
ENSCING00000009532	-	67	37.414	MGP_PahariEiJ_G0020060	Zc3h7b	57	37.414	Mus_pahari
ENSCING00000009532	-	67	37.414	MGP_SPRETEiJ_G0020956	Zc3h7b	57	37.414	Mus_spretus
ENSCING00000009532	-	68	37.372	ENSMPUG00000016409	ZC3H7B	58	37.372	Mustela_putorius_furo
ENSCING00000009532	-	67	37.005	ENSMLUG00000016057	ZC3H7A	62	35.748	Myotis_lucifugus
ENSCING00000009532	-	68	37.436	ENSMLUG00000003292	ZC3H7B	62	37.436	Myotis_lucifugus
ENSCING00000009532	-	67	37.762	ENSNGAG00000013813	Zc3h7b	57	37.762	Nannospalax_galili
ENSCING00000009532	-	64	39.162	ENSNLEG00000015470	ZC3H7B	57	39.162	Nomascus_leucogenys
ENSCING00000009532	-	67	38.021	ENSNLEG00000010179	ZC3H7A	57	38.021	Nomascus_leucogenys
ENSCING00000009532	-	69	35.966	ENSMEUG00000014072	ZC3H7B	60	35.966	Notamacropus_eugenii
ENSCING00000009532	-	67	37.866	ENSOPRG00000013540	ZC3H7B	57	37.866	Ochotona_princeps
ENSCING00000009532	-	67	38.394	ENSODEG00000012411	ZC3H7B	59	38.394	Octodon_degus
ENSCING00000009532	-	67	38.569	ENSOCUG00000002712	ZC3H7B	57	37.828	Oryctolagus_cuniculus
ENSCING00000009532	-	63	36.918	ENSORLG00000014127	ZC3H7B	53	37.097	Oryzias_latipes
ENSCING00000009532	-	63	36.918	ENSORLG00020007911	ZC3H7B	53	37.097	Oryzias_latipes_hni
ENSCING00000009532	-	63	37.660	ENSORLG00015019109	ZC3H7B	63	37.843	Oryzias_latipes_hsok
ENSCING00000009532	-	63	38.129	ENSOMEG00000005686	ZC3H7B	53	38.129	Oryzias_melastigma
ENSCING00000009532	-	66	37.522	ENSOGAG00000008827	ZC3H7B	57	37.522	Otolemur_garnettii
ENSCING00000009532	-	67	38.194	ENSOGAG00000010411	ZC3H7A	57	38.194	Otolemur_garnettii
ENSCING00000009532	-	67	37.306	ENSOARG00000006808	ZC3H7A	57	37.306	Ovis_aries
ENSCING00000009532	-	68	36.457	ENSPPAG00000034228	ZC3H7B	59	36.457	Pan_paniscus
ENSCING00000009532	-	67	37.847	ENSPPAG00000027430	ZC3H7A	57	37.847	Pan_paniscus
ENSCING00000009532	-	67	37.586	ENSPPRG00000006647	ZC3H7B	58	37.586	Panthera_pardus
ENSCING00000009532	-	67	37.759	ENSPTIG00000013113	ZC3H7B	58	37.759	Panthera_tigris_altaica
ENSCING00000009532	-	67	37.847	ENSPTRG00000007776	ZC3H7A	58	37.847	Pan_troglodytes
ENSCING00000009532	-	71	37.397	ENSPTRG00000014424	ZC3H7B	58	37.397	Pan_troglodytes
ENSCING00000009532	-	67	38.021	ENSPANG00000015185	ZC3H7A	58	38.021	Papio_anubis
ENSCING00000009532	-	64	39.162	ENSPANG00000019690	ZC3H7B	55	39.162	Papio_anubis
ENSCING00000009532	-	55	38.272	ENSPKIG00000003219	zc3h7bb	68	38.017	Paramormyrops_kingsleyae
ENSCING00000009532	-	75	34.933	ENSPKIG00000008681	ZC3H7B	65	34.933	Paramormyrops_kingsleyae
ENSCING00000009532	-	64	39.927	ENSPSIG00000011280	ZC3H7A	54	39.927	Pelodiscus_sinensis
ENSCING00000009532	-	64	37.024	ENSPSIG00000005743	ZC3H7B	55	37.024	Pelodiscus_sinensis
ENSCING00000009532	-	61	35.249	ENSPMGG00000017941	ZC3H7B	69	34.594	Periophthalmus_magnuspinnatus
ENSCING00000009532	-	67	37.759	ENSPEMG00000023990	Zc3h7b	59	37.759	Peromyscus_maniculatus_bairdii
ENSCING00000009532	-	63	35.846	ENSPMAG00000001085	-	100	35.846	Petromyzon_marinus
ENSCING00000009532	-	70	35.610	ENSPLAG00000017361	ZC3H7B	58	35.714	Poecilia_latipinna
ENSCING00000009532	-	70	35.889	ENSPMEG00000018149	ZC3H7B	58	35.889	Poecilia_mexicana
ENSCING00000009532	-	70	35.552	ENSPREG00000017699	ZC3H7B	58	35.656	Poecilia_reticulata
ENSCING00000009532	-	67	38.021	ENSPPYG00000007111	ZC3H7A	57	38.021	Pongo_abelii
ENSCING00000009532	-	64	39.162	ENSPPYG00000011866	ZC3H7B	55	39.162	Pongo_abelii
ENSCING00000009532	-	61	38.023	ENSPCAG00000009517	ZC3H7B	51	38.023	Procavia_capensis
ENSCING00000009532	-	61	38.606	ENSPCAG00000000183	ZC3H7A	54	38.606	Procavia_capensis
ENSCING00000009532	-	67	37.937	ENSPCOG00000024031	ZC3H7B	57	37.937	Propithecus_coquereli
ENSCING00000009532	-	66	37.979	ENSPVAG00000015398	ZC3H7A	57	37.979	Pteropus_vampyrus
ENSCING00000009532	-	67	37.931	ENSPVAG00000001159	ZC3H7B	57	37.778	Pteropus_vampyrus
ENSCING00000009532	-	74	32.974	ENSPNYG00000024065	ZC3H7B	72	33.128	Pundamilia_nyererei
ENSCING00000009532	-	67	35.323	ENSPNAG00000013903	zc3h7ba	59	35.323	Pygocentrus_nattereri
ENSCING00000009532	-	67	38.220	ENSRNOG00000055925	Zc3h7b	57	38.220	Rattus_norvegicus
ENSCING00000009532	-	67	37.024	ENSRNOG00000002420	Zc3h7a	58	36.905	Rattus_norvegicus
ENSCING00000009532	-	67	38.021	ENSRBIG00000025104	ZC3H7A	57	38.021	Rhinopithecus_bieti
ENSCING00000009532	-	64	39.162	ENSRBIG00000013333	ZC3H7B	55	39.162	Rhinopithecus_bieti
ENSCING00000009532	-	64	39.162	ENSRROG00000033899	ZC3H7B	55	39.162	Rhinopithecus_roxellana
ENSCING00000009532	-	67	38.021	ENSRROG00000016165	ZC3H7A	57	38.021	Rhinopithecus_roxellana
ENSCING00000009532	-	67	38.021	ENSSBOG00000025443	ZC3H7A	58	38.021	Saimiri_boliviensis_boliviensis
ENSCING00000009532	-	69	36.842	ENSSHAG00000008653	ZC3H7B	59	37.094	Sarcophilus_harrisii
ENSCING00000009532	-	64	35.537	ENSSFOG00015011477	zc3h7b	58	35.207	Scleropages_formosus
ENSCING00000009532	-	67	32.062	ENSSLDG00000018333	ZC3H7B	79	32.236	Seriola_lalandi_dorsalis
ENSCING00000009532	-	69	36.455	ENSSPUG00000011490	ZC3H7B	59	36.318	Sphenodon_punctatus
ENSCING00000009532	-	63	35.587	ENSSPAG00000017788	ZC3H7B	53	35.587	Stegastes_partitus
ENSCING00000009532	-	65	38.571	ENSSSCG00000033036	ZC3H7B	56	38.571	Sus_scrofa
ENSCING00000009532	-	64	37.158	ENSTGUG00000009946	ZC3H7B	56	37.158	Taeniopygia_guttata
ENSCING00000009532	-	64	40.000	ENSTGUG00000004910	ZC3H7A	54	40.000	Taeniopygia_guttata
ENSCING00000009532	-	64	31.720	ENSTRUG00000002273	ZC3H7B	75	31.588	Takifugu_rubripes
ENSCING00000009532	-	67	37.762	ENSTTRG00000003362	ZC3H7B	56	37.937	Tursiops_truncatus
ENSCING00000009532	-	67	37.586	ENSUAMG00000026203	ZC3H7B	57	37.937	Ursus_americanus
ENSCING00000009532	-	67	35.439	ENSUMAG00000021049	ZC3H7B	57	35.439	Ursus_maritimus
ENSCING00000009532	-	67	37.586	ENSVVUG00000003660	ZC3H7B	57	37.937	Vulpes_vulpes
ENSCING00000009532	-	80	33.616	ENSXETG00000016617	zc3h7a	69	33.616	Xenopus_tropicalis
ENSCING00000009532	-	66	37.587	ENSXETG00000006332	zc3h7b	57	37.587	Xenopus_tropicalis
ENSCING00000009532	-	74	33.641	ENSXMAG00000022258	ZC3H7B	60	33.742	Xiphophorus_maculatus