EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009541 (Gene tree)
Gene ID: 100186938
Gene Symbol: -
Alias: -
Full Name: cytoplasmic aconitate hydratase
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 9620 bases
Position: chr3:2323592-2333211
Accession: 100186938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019416	Aconitase	PF00330.20	5.8e-179	1	1
ENSCINP00000019416	Aconitase_C	PF00694.19	1.4e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019416	-	3045	-	ENSCINP00000019416	892 (aa)	XP_002126781	F6U9F4

Gene Model

Click here to download ENSCING00000009541's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00020	Citrate cycle (TCA cycle)	KEGG
cin00630	Glyoxylate and dicarboxylate metabolism	KEGG
cin01100	Metabolic pathways	KEGG
cin01200	Carbon metabolism	KEGG
cin01210	2-Oxocarboxylic acid metabolism	KEGG
cin01230	Biosynthesis of amino acids	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009541	-	99	61.425	WBGene00000040	aco-1	99	61.425	Caenorhabditis_elegans
ENSCING00000009541	-	100	89.509	ENSCSAVG00000011708	-	99	89.977	Ciona_savignyi
ENSCING00000009541	-	99	66.443	FBgn0024958	Irp-1A	99	66.443	Drosophila_melanogaster
ENSCING00000009541	-	99	65.174	FBgn0024957	Irp-1B	99	65.174	Drosophila_melanogaster
ENSCING00000009541	-	98	67.657	ENSEBUG00000003892	-	97	67.657	Eptatretus_burgeri