EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009622 (Gene tree)
Gene ID: 100185526
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6837 bases
Position: chr9:5560803-5567639
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019560	ResIII	PF04851.15	1.5e-06	1	1
ENSCINP00000019560	DEAD	PF00270.29	5.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019560	-	2420	-	ENSCINP00000019560	595 (aa)	-	F6ZUU0

Gene Model

Click here to download ENSCING00000009622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009622	-	98	53.220	ENSG00000111364	DDX55	96	53.729	Homo_sapiens
ENSCING00000009622	-	99	53.255	ENSAPOG00000013126	ddx55	99	53.756	Acanthochromis_polyacanthus
ENSCING00000009622	-	98	53.220	ENSAMEG00000015274	DDX55	96	52.881	Ailuropoda_melanoleuca
ENSCING00000009622	-	99	53.936	ENSACIG00000007580	ddx55	99	53.936	Amphilophus_citrinellus
ENSCING00000009622	-	99	53.333	ENSAOCG00000012037	ddx55	93	53.833	Amphiprion_ocellaris
ENSCING00000009622	-	99	53.500	ENSAPEG00000011003	ddx55	93	53.500	Amphiprion_percula
ENSCING00000009622	-	98	53.299	ENSATEG00000004029	ddx55	97	53.299	Anabas_testudineus
ENSCING00000009622	-	94	51.504	ENSAPLG00000015032	DDX55	98	51.150	Anas_platyrhynchos
ENSCING00000009622	-	98	52.365	ENSACAG00000015296	DDX55	96	52.872	Anolis_carolinensis
ENSCING00000009622	-	86	53.591	ENSANAG00000034064	DDX55	95	53.591	Aotus_nancymaae
ENSCING00000009622	-	99	53.769	ENSACLG00000024691	ddx55	99	53.769	Astatotilapia_calliptera
ENSCING00000009622	-	99	48.752	ENSAMXG00000019947	ddx55	97	48.752	Astyanax_mexicanus
ENSCING00000009622	-	98	53.220	ENSBTAG00000007266	DDX55	96	50.678	Bos_taurus
ENSCING00000009622	-	93	36.538	WBGene00013983	ZK512.2	99	35.094	Caenorhabditis_elegans
ENSCING00000009622	-	98	53.390	ENSCJAG00000020471	-	96	54.237	Callithrix_jacchus
ENSCING00000009622	-	98	53.390	ENSCAFG00000007452	DDX55	96	53.051	Canis_familiaris
ENSCING00000009622	-	92	54.659	ENSCAFG00020015254	DDX55	95	55.064	Canis_lupus_dingo
ENSCING00000009622	-	98	53.559	ENSCHIG00000020402	DDX55	96	54.068	Capra_hircus
ENSCING00000009622	-	98	53.130	ENSTSYG00000007427	DDX55	96	53.638	Carlito_syrichta
ENSCING00000009622	-	92	54.578	ENSCAPG00000005124	DDX55	93	54.399	Cavia_aperea
ENSCING00000009622	-	98	53.820	ENSCPOG00000010015	DDX55	96	53.650	Cavia_porcellus
ENSCING00000009622	-	98	52.373	ENSCCAG00000021652	DDX55	96	53.729	Cebus_capucinus
ENSCING00000009622	-	98	50.839	ENSCATG00000034315	DDX55	96	51.342	Cercocebus_atys
ENSCING00000009622	-	98	53.820	ENSCLAG00000011203	DDX55	96	53.820	Chinchilla_lanigera
ENSCING00000009622	-	98	53.390	ENSCSAG00000002057	DDX55	96	53.898	Chlorocebus_sabaeus
ENSCING00000009622	-	88	55.431	ENSCPBG00000025960	DDX55	97	55.147	Chrysemys_picta_bellii
ENSCING00000009622	-	99	78.475	ENSCSAVG00000003375	-	99	78.475	Ciona_savignyi
ENSCING00000009622	-	98	53.390	ENSCANG00000000156	DDX55	96	53.898	Colobus_angolensis_palliatus
ENSCING00000009622	-	99	53.088	ENSCGRG00001001652	Ddx55	97	53.088	Cricetulus_griseus_chok1gshd
ENSCING00000009622	-	99	53.088	ENSCGRG00000014742	Ddx55	97	53.088	Cricetulus_griseus_crigri
ENSCING00000009622	-	98	53.898	ENSCSEG00000012161	ddx55	97	54.068	Cynoglossus_semilaevis
ENSCING00000009622	-	98	52.891	ENSCVAG00000006635	ddx55	97	53.571	Cyprinodon_variegatus
ENSCING00000009622	-	98	54.118	ENSDARG00000009864	ddx55	98	54.118	Danio_rerio
ENSCING00000009622	-	98	53.976	ENSDNOG00000005167	DDX55	95	54.484	Dasypus_novemcinctus
ENSCING00000009622	-	98	41.760	FBgn0037561	CG9630	99	42.080	Drosophila_melanogaster
ENSCING00000009622	-	83	73.333	ENSETEG00000001826	DDX55	87	73.333	Echinops_telfairi
ENSCING00000009622	-	97	48.435	ENSEBUG00000007071	ddx55	98	50.265	Eptatretus_burgeri
ENSCING00000009622	-	98	53.469	ENSEASG00005012650	DDX55	99	55.248	Equus_asinus_asinus
ENSCING00000009622	-	88	56.098	ENSECAG00000011237	DDX55	85	56.111	Equus_caballus
ENSCING00000009622	-	98	46.350	ENSEEUG00000006313	DDX55	96	46.859	Erinaceus_europaeus
ENSCING00000009622	-	99	53.910	ENSELUG00000002616	ddx55	97	53.910	Esox_lucius
ENSCING00000009622	-	98	53.457	ENSFCAG00000003770	DDX55	96	53.963	Felis_catus
ENSCING00000009622	-	97	52.650	ENSFALG00000009300	DDX55	96	52.991	Ficedula_albicollis
ENSCING00000009622	-	98	53.990	ENSFDAG00000004680	DDX55	96	53.990	Fukomys_damarensis
ENSCING00000009622	-	98	53.401	ENSFHEG00000007912	ddx55	98	53.571	Fundulus_heteroclitus
ENSCING00000009622	-	98	50.000	ENSGMOG00000017762	ddx55	96	50.000	Gadus_morhua
ENSCING00000009622	-	97	53.141	ENSGALG00000003298	DDX55	97	53.141	Gallus_gallus
ENSCING00000009622	-	98	52.381	ENSGAFG00000004388	ddx55	98	52.891	Gambusia_affinis
ENSCING00000009622	-	98	52.551	ENSGACG00000015591	ddx55	94	52.551	Gasterosteus_aculeatus
ENSCING00000009622	-	87	55.577	ENSGAGG00000014403	DDX55	96	55.288	Gopherus_agassizii
ENSCING00000009622	-	98	53.220	ENSGGOG00000026102	DDX55	96	53.729	Gorilla_gorilla
ENSCING00000009622	-	99	53.769	ENSHBUG00000011523	ddx55	99	53.769	Haplochromis_burtoni
ENSCING00000009622	-	98	53.650	ENSHGLG00000019202	DDX55	96	53.990	Heterocephalus_glaber_female
ENSCING00000009622	-	98	53.650	ENSHGLG00100019440	DDX55	96	53.990	Heterocephalus_glaber_male
ENSCING00000009622	-	98	46.633	ENSHCOG00000004710	ddx55	99	46.712	Hippocampus_comes
ENSCING00000009622	-	99	54.027	ENSIPUG00000014551	ddx55	96	53.859	Ictalurus_punctatus
ENSCING00000009622	-	98	53.390	ENSSTOG00000006121	DDX55	96	53.390	Ictidomys_tridecemlineatus
ENSCING00000009622	-	95	53.846	ENSJJAG00000013401	Ddx55	96	53.480	Jaculus_jaculus
ENSCING00000009622	-	98	53.469	ENSKMAG00000022006	ddx55	98	53.469	Kryptolebias_marmoratus
ENSCING00000009622	-	98	52.453	ENSLBEG00000021815	ddx55	96	52.453	Labrus_bergylta
ENSCING00000009622	-	88	55.722	ENSLACG00000017050	DDX55	97	53.756	Latimeria_chalumnae
ENSCING00000009622	-	99	53.500	ENSLOCG00000005828	ddx55	98	53.500	Lepisosteus_oculatus
ENSCING00000009622	-	98	53.141	ENSLAFG00000007293	DDX55	96	53.650	Loxodonta_africana
ENSCING00000009622	-	98	53.141	ENSMFAG00000038165	DDX55	96	53.650	Macaca_fascicularis
ENSCING00000009622	-	98	53.390	ENSMMUG00000013178	DDX55	96	53.898	Macaca_mulatta
ENSCING00000009622	-	98	53.390	ENSMNEG00000028630	DDX55	96	53.898	Macaca_nemestrina
ENSCING00000009622	-	98	53.220	ENSMLEG00000039187	DDX55	96	53.729	Mandrillus_leucophaeus
ENSCING00000009622	-	99	54.305	ENSMAMG00000011297	ddx55	98	54.305	Mastacembelus_armatus
ENSCING00000009622	-	99	53.769	ENSMZEG00005008047	ddx55	99	53.769	Maylandia_zebra
ENSCING00000009622	-	91	52.641	ENSMGAG00000003185	DDX55	90	52.641	Meleagris_gallopavo
ENSCING00000009622	-	99	52.922	ENSMAUG00000020054	Ddx55	97	53.422	Mesocricetus_auratus
ENSCING00000009622	-	98	46.870	ENSMICG00000006477	DDX55	96	47.377	Microcebus_murinus
ENSCING00000009622	-	98	53.390	ENSMOCG00000021289	Ddx55	96	53.898	Microtus_ochrogaster
ENSCING00000009622	-	99	53.245	ENSMMOG00000009411	ddx55	98	53.078	Mola_mola
ENSCING00000009622	-	83	56.773	ENSMODG00000012519	DDX55	94	53.915	Monodelphis_domestica
ENSCING00000009622	-	88	51.873	ENSMALG00000018543	ddx55	97	49.581	Monopterus_albus
ENSCING00000009622	-	75	57.048	MGP_CAROLIEiJ_G0027755	-	99	57.048	Mus_caroli
ENSCING00000009622	-	98	53.638	ENSMUSG00000029389	Ddx55	96	54.146	Mus_musculus
ENSCING00000009622	-	98	51.864	MGP_PahariEiJ_G0024335	Ddx55	96	52.373	Mus_pahari
ENSCING00000009622	-	98	53.469	MGP_SPRETEiJ_G0028753	Ddx55	96	53.976	Mus_spretus
ENSCING00000009622	-	98	51.182	ENSMPUG00000001505	DDX55	96	50.845	Mustela_putorius_furo
ENSCING00000009622	-	88	48.790	ENSMLUG00000025148	-	98	48.358	Myotis_lucifugus
ENSCING00000009622	-	89	51.311	ENSMLUG00000001265	-	89	51.311	Myotis_lucifugus
ENSCING00000009622	-	98	53.559	ENSNGAG00000020564	Ddx55	96	53.559	Nannospalax_galili
ENSCING00000009622	-	99	53.769	ENSNBRG00000018748	ddx55	99	53.769	Neolamprologus_brichardi
ENSCING00000009622	-	98	53.220	ENSNLEG00000001658	DDX55	96	53.729	Nomascus_leucogenys
ENSCING00000009622	-	88	53.645	ENSMEUG00000013689	DDX55	96	51.347	Notamacropus_eugenii
ENSCING00000009622	-	98	51.952	ENSOPRG00000000850	DDX55	96	52.292	Ochotona_princeps
ENSCING00000009622	-	98	53.041	ENSODEG00000009632	-	97	53.041	Octodon_degus
ENSCING00000009622	-	95	45.293	ENSODEG00000016592	-	97	47.358	Octodon_degus
ENSCING00000009622	-	99	53.601	ENSONIG00000015311	ddx55	97	53.601	Oreochromis_niloticus
ENSCING00000009622	-	92	54.659	ENSOANG00000015332	DDX55	96	55.197	Ornithorhynchus_anatinus
ENSCING00000009622	-	98	51.952	ENSOCUG00000003456	DDX55	96	52.292	Oryctolagus_cuniculus
ENSCING00000009622	-	97	54.545	ENSORLG00000029482	ddx55	96	54.717	Oryzias_latipes
ENSCING00000009622	-	97	54.889	ENSORLG00015004885	ddx55	94	57.090	Oryzias_latipes_hsok
ENSCING00000009622	-	97	53.345	ENSOMEG00000023619	ddx55	96	53.859	Oryzias_melastigma
ENSCING00000009622	-	98	52.632	ENSOGAG00000009195	DDX55	95	53.141	Otolemur_garnettii
ENSCING00000009622	-	98	53.559	ENSOARG00000003364	DDX55	96	54.068	Ovis_aries
ENSCING00000009622	-	98	53.220	ENSPPAG00000005988	DDX55	95	54.188	Pan_paniscus
ENSCING00000009622	-	98	53.457	ENSPPRG00000012157	DDX55	96	53.963	Panthera_pardus
ENSCING00000009622	-	93	54.383	ENSPTIG00000011490	DDX55	91	54.919	Panthera_tigris_altaica
ENSCING00000009622	-	98	53.220	ENSPTRG00000005601	DDX55	96	53.729	Pan_troglodytes
ENSCING00000009622	-	98	53.220	ENSPANG00000007905	DDX55	96	53.729	Papio_anubis
ENSCING00000009622	-	97	54.003	ENSPKIG00000023661	ddx55	98	54.003	Paramormyrops_kingsleyae
ENSCING00000009622	-	93	53.571	ENSPSIG00000012901	DDX55	99	53.214	Pelodiscus_sinensis
ENSCING00000009622	-	88	54.221	ENSPMGG00000017224	ddx55	98	53.959	Periophthalmus_magnuspinnatus
ENSCING00000009622	-	98	53.559	ENSPEMG00000018052	Ddx55	96	54.068	Peromyscus_maniculatus_bairdii
ENSCING00000009622	-	88	48.593	ENSPMAG00000007486	ddx55	100	48.780	Petromyzon_marinus
ENSCING00000009622	-	88	54.991	ENSPCIG00000010973	DDX55	95	55.515	Phascolarctos_cinereus
ENSCING00000009622	-	98	53.041	ENSPFOG00000006970	ddx55	90	53.547	Poecilia_formosa
ENSCING00000009622	-	98	53.220	ENSPLAG00000014735	ddx55	98	53.729	Poecilia_latipinna
ENSCING00000009622	-	98	53.051	ENSPMEG00000020635	ddx55	98	53.559	Poecilia_mexicana
ENSCING00000009622	-	98	53.051	ENSPREG00000016644	ddx55	98	53.559	Poecilia_reticulata
ENSCING00000009622	-	88	55.535	ENSPPYG00000005091	DDX55	96	52.881	Pongo_abelii
ENSCING00000009622	-	98	52.881	ENSPCAG00000014127	DDX55	96	53.390	Procavia_capensis
ENSCING00000009622	-	98	52.881	ENSPCOG00000011189	DDX55	96	53.390	Propithecus_coquereli
ENSCING00000009622	-	98	51.017	ENSPVAG00000015321	DDX55	96	52.034	Pteropus_vampyrus
ENSCING00000009622	-	99	53.601	ENSPNYG00000003669	ddx55	99	53.601	Pundamilia_nyererei
ENSCING00000009622	-	99	54.758	ENSPNAG00000012855	ddx55	98	54.758	Pygocentrus_nattereri
ENSCING00000009622	-	98	53.390	ENSRNOG00000001043	Ddx55	96	53.898	Rattus_norvegicus
ENSCING00000009622	-	98	52.712	ENSRBIG00000044699	DDX55	96	53.220	Rhinopithecus_bieti
ENSCING00000009622	-	98	53.051	ENSRROG00000024824	DDX55	96	53.559	Rhinopithecus_roxellana
ENSCING00000009622	-	90	36.590	YFL002C	-	87	37.937	Saccharomyces_cerevisiae
ENSCING00000009622	-	98	52.373	ENSSBOG00000024833	DDX55	96	53.390	Saimiri_boliviensis_boliviensis
ENSCING00000009622	-	83	57.455	ENSSHAG00000015820	DDX55	96	54.626	Sarcophilus_harrisii
ENSCING00000009622	-	98	53.469	ENSSFOG00015017496	ddx55	95	53.469	Scleropages_formosus
ENSCING00000009622	-	99	52.676	ENSSMAG00000010441	ddx55	98	52.755	Scophthalmus_maximus
ENSCING00000009622	-	99	52.764	ENSSDUG00000023568	ddx55	98	52.764	Seriola_dumerili
ENSCING00000009622	-	99	48.161	ENSSLDG00000011299	ddx55	97	48.161	Seriola_lalandi_dorsalis
ENSCING00000009622	-	92	54.234	ENSSARG00000003842	DDX55	97	54.919	Sorex_araneus
ENSCING00000009622	-	98	52.284	ENSSPUG00000012798	DDX55	96	52.284	Sphenodon_punctatus
ENSCING00000009622	-	99	53.109	ENSSPAG00000011806	ddx55	97	53.613	Stegastes_partitus
ENSCING00000009622	-	88	55.451	ENSSSCG00000009771	DDX55	95	55.166	Sus_scrofa
ENSCING00000009622	-	96	53.022	ENSTGUG00000005302	-	96	53.162	Taeniopygia_guttata
ENSCING00000009622	-	98	54.653	ENSTRUG00000018525	ddx55	97	54.653	Takifugu_rubripes
ENSCING00000009622	-	93	54.513	ENSTNIG00000013515	DDX55	96	54.096	Tetraodon_nigroviridis
ENSCING00000009622	-	75	51.327	ENSTBEG00000010822	DDX55	99	51.327	Tupaia_belangeri
ENSCING00000009622	-	98	53.820	ENSTTRG00000007251	DDX55	96	54.329	Tursiops_truncatus
ENSCING00000009622	-	98	53.220	ENSUAMG00000012589	DDX55	96	52.881	Ursus_americanus
ENSCING00000009622	-	91	53.818	ENSUMAG00000003869	DDX55	96	53.455	Ursus_maritimus
ENSCING00000009622	-	91	49.545	ENSVPAG00000007028	DDX55	96	50.091	Vicugna_pacos
ENSCING00000009622	-	98	53.559	ENSVVUG00000027506	DDX55	94	56.936	Vulpes_vulpes
ENSCING00000009622	-	98	52.862	ENSXETG00000005825	ddx55	97	53.199	Xenopus_tropicalis
ENSCING00000009622	-	98	53.231	ENSXCOG00000010120	ddx55	98	53.741	Xiphophorus_couchianus
ENSCING00000009622	-	98	53.571	ENSXMAG00000011731	ddx55	98	54.082	Xiphophorus_maculatus