EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009628 (Gene tree)
Gene ID: 100169887
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4449 bases
Position: chr9:5590733-5595181
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019569	KH_1	PF00013.29	1.3e-48	1	3
ENSCINP00000019569	KH_1	PF00013.29	1.3e-48	2	3
ENSCINP00000019569	KH_1	PF00013.29	1.3e-48	3	3
ENSCINP00000019568	KH_1	PF00013.29	5.9e-32	1	2
ENSCINP00000019568	KH_1	PF00013.29	5.9e-32	2	2
ENSCINP00000019568	KH_2	PF07650.17	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019569	-	954	-	ENSCINP00000019569	318 (aa)	-	F6ZUP0
ENSCINT00000019568	-	600	-	ENSCINP00000019568	200 (aa)	-	Q4H3G4

Gene Model

Click here to download ENSCING00000009628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009628	-	95	36.429	WBGene00007534	C12D8.1	59	41.975	Caenorhabditis_elegans
ENSCING00000009628	-	83	84.874	ENSCSAVG00000003258	-	55	84.874	Ciona_savignyi
ENSCING00000009628	-	90	87.417	ENSCSAVG00000003294	-	91	92.857	Ciona_savignyi
ENSCING00000009628	-	85	36.397	FBgn0014870	Psi	52	37.455	Drosophila_melanogaster