EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009659 (Gene tree)
Gene ID: 100176184
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4274 bases
Position: chrHT000062.1:417870-422143
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019641	Nup35_RRM	PF05172.13	2.9e-22	1	1
ENSCINP00000019641	Nup35_RRM_2	PF14605.6	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019641	-	1635	-	ENSCINP00000019641	321 (aa)	-	F6WUB5

Gene Model

Click here to download ENSCING00000009659's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009659	-	97	41.896	ENSG00000163002	NUP35	99	41.538	Homo_sapiens
ENSCING00000009659	-	97	40.683	ENSAPOG00000003630	nup35	97	41.615	Acanthochromis_polyacanthus
ENSCING00000009659	-	97	42.378	ENSAMEG00000001191	NUP35	95	42.378	Ailuropoda_melanoleuca
ENSCING00000009659	-	79	41.473	ENSACIG00000023984	nup35	96	42.636	Amphilophus_citrinellus
ENSCING00000009659	-	97	41.159	ENSAOCG00000007484	nup35	97	42.073	Amphiprion_ocellaris
ENSCING00000009659	-	97	41.159	ENSAPEG00000020027	nup35	97	42.378	Amphiprion_percula
ENSCING00000009659	-	97	44.551	ENSATEG00000019305	nup35	97	44.872	Anabas_testudineus
ENSCING00000009659	-	99	43.243	ENSAPLG00000009161	NUP35	99	43.243	Anas_platyrhynchos
ENSCING00000009659	-	97	41.615	ENSACAG00000008692	NUP35	94	41.615	Anolis_carolinensis
ENSCING00000009659	-	97	42.988	ENSANAG00000021090	NUP35	95	42.988	Aotus_nancymaae
ENSCING00000009659	-	97	42.679	ENSACLG00000013918	nup35	97	42.679	Astatotilapia_calliptera
ENSCING00000009659	-	98	44.000	ENSAMXG00000003371	nup35	99	43.750	Astyanax_mexicanus
ENSCING00000009659	-	97	42.378	ENSBTAG00000009777	NUP35	95	42.378	Bos_taurus
ENSCING00000009659	-	97	42.508	ENSCJAG00000011104	NUP35	95	42.508	Callithrix_jacchus
ENSCING00000009659	-	97	42.331	ENSCAFG00000031849	NUP35	99	42.331	Canis_familiaris
ENSCING00000009659	-	97	42.683	ENSCAFG00020008408	NUP35	95	42.683	Canis_lupus_dingo
ENSCING00000009659	-	97	42.025	ENSCHIG00000023148	NUP35	99	42.025	Capra_hircus
ENSCING00000009659	-	97	42.006	ENSTSYG00000002117	NUP35	95	42.006	Carlito_syrichta
ENSCING00000009659	-	97	35.093	ENSCAPG00000005703	NUP35	96	36.086	Cavia_aperea
ENSCING00000009659	-	97	41.615	ENSCPOG00000011906	NUP35	97	42.508	Cavia_porcellus
ENSCING00000009659	-	97	42.508	ENSCCAG00000025009	NUP35	88	52.222	Cebus_capucinus
ENSCING00000009659	-	97	36.593	ENSCATG00000033109	NUP35	94	36.593	Cercocebus_atys
ENSCING00000009659	-	97	41.463	ENSCLAG00000012559	NUP35	95	41.768	Chinchilla_lanigera
ENSCING00000009659	-	97	41.896	ENSCSAG00000012620	NUP35	95	41.896	Chlorocebus_sabaeus
ENSCING00000009659	-	97	42.508	ENSCPBG00000001303	NUP35	96	41.994	Chrysemys_picta_bellii
ENSCING00000009659	-	97	73.030	ENSCSAVG00000007467	-	99	73.030	Ciona_savignyi
ENSCING00000009659	-	97	41.896	ENSCANG00000030785	NUP35	99	41.538	Colobus_angolensis_palliatus
ENSCING00000009659	-	97	41.975	ENSCGRG00001018638	-	95	41.975	Cricetulus_griseus_chok1gshd
ENSCING00000009659	-	97	41.975	ENSCGRG00000011313	-	95	41.975	Cricetulus_griseus_crigri
ENSCING00000009659	-	97	41.411	ENSCSEG00000000938	nup35	97	41.411	Cynoglossus_semilaevis
ENSCING00000009659	-	97	43.312	ENSCVAG00000001792	nup35	97	43.312	Cyprinodon_variegatus
ENSCING00000009659	-	98	42.378	ENSDARG00000012222	nup35	99	41.975	Danio_rerio
ENSCING00000009659	-	97	41.520	ENSDNOG00000038754	-	95	41.520	Dasypus_novemcinctus
ENSCING00000009659	-	97	42.560	ENSDNOG00000009513	-	84	42.560	Dasypus_novemcinctus
ENSCING00000009659	-	97	42.202	ENSDORG00000010458	-	96	42.202	Dipodomys_ordii
ENSCING00000009659	-	98	30.056	FBgn0030943	CG6540	99	30.056	Drosophila_melanogaster
ENSCING00000009659	-	97	43.119	ENSETEG00000005896	NUP35	99	43.119	Echinops_telfairi
ENSCING00000009659	-	97	38.037	ENSEBUG00000013034	nup35	98	38.037	Eptatretus_burgeri
ENSCING00000009659	-	97	41.369	ENSEASG00005022100	NUP35	95	41.369	Equus_asinus_asinus
ENSCING00000009659	-	97	41.194	ENSECAG00000003968	NUP35	99	40.841	Equus_caballus
ENSCING00000009659	-	97	37.615	ENSEEUG00000008469	NUP35	95	37.615	Erinaceus_europaeus
ENSCING00000009659	-	99	41.994	ENSELUG00000013693	nup35	99	42.415	Esox_lucius
ENSCING00000009659	-	97	41.515	ENSFCAG00000025636	NUP35	99	42.415	Felis_catus
ENSCING00000009659	-	97	41.994	ENSFALG00000013175	NUP35	96	42.296	Ficedula_albicollis
ENSCING00000009659	-	97	42.508	ENSFDAG00000017998	NUP35	95	42.508	Fukomys_damarensis
ENSCING00000009659	-	97	42.628	ENSFHEG00000010229	nup35	97	43.269	Fundulus_heteroclitus
ENSCING00000009659	-	55	52.809	ENSGMOG00000003337	nup35	74	52.809	Gadus_morhua
ENSCING00000009659	-	97	43.034	ENSGALG00000002689	NUP35	96	43.034	Gallus_gallus
ENSCING00000009659	-	97	42.540	ENSGAFG00000022048	nup35	97	43.810	Gambusia_affinis
ENSCING00000009659	-	97	42.320	ENSGACG00000008203	nup35	97	42.947	Gasterosteus_aculeatus
ENSCING00000009659	-	97	41.718	ENSGAGG00000001967	NUP35	99	41.718	Gopherus_agassizii
ENSCING00000009659	-	97	41.896	ENSGGOG00000009919	NUP35	95	41.896	Gorilla_gorilla
ENSCING00000009659	-	91	36.842	ENSHGLG00000008616	-	89	36.842	Heterocephalus_glaber_female
ENSCING00000009659	-	97	41.896	ENSHGLG00000013230	NUP35	95	41.896	Heterocephalus_glaber_female
ENSCING00000009659	-	97	31.661	ENSHGLG00000000414	-	96	31.661	Heterocephalus_glaber_female
ENSCING00000009659	-	97	31.661	ENSHGLG00100010869	-	96	31.661	Heterocephalus_glaber_male
ENSCING00000009659	-	91	36.842	ENSHGLG00100000091	-	89	36.842	Heterocephalus_glaber_male
ENSCING00000009659	-	97	41.896	ENSHGLG00100012840	NUP35	95	41.896	Heterocephalus_glaber_male
ENSCING00000009659	-	97	42.006	ENSHCOG00000003882	nup35	97	42.006	Hippocampus_comes
ENSCING00000009659	-	98	41.745	ENSIPUG00000002798	nup35	98	41.745	Ictalurus_punctatus
ENSCING00000009659	-	97	42.249	ENSSTOG00000000711	NUP35	95	42.249	Ictidomys_tridecemlineatus
ENSCING00000009659	-	97	39.241	ENSJJAG00000007003	-	93	39.241	Jaculus_jaculus
ENSCING00000009659	-	97	37.427	ENSJJAG00000017434	-	95	37.427	Jaculus_jaculus
ENSCING00000009659	-	83	37.722	ENSJJAG00000006387	-	90	37.722	Jaculus_jaculus
ENSCING00000009659	-	97	42.073	ENSJJAG00000016432	-	96	42.073	Jaculus_jaculus
ENSCING00000009659	-	97	41.772	ENSKMAG00000011162	nup35	97	42.089	Kryptolebias_marmoratus
ENSCING00000009659	-	97	33.016	ENSLBEG00000012416	nup35	97	33.016	Labrus_bergylta
ENSCING00000009659	-	97	45.652	ENSLACG00000008247	NUP35	99	45.652	Latimeria_chalumnae
ENSCING00000009659	-	97	43.260	ENSLOCG00000006726	nup35	99	42.462	Lepisosteus_oculatus
ENSCING00000009659	-	97	40.000	ENSLAFG00000008155	NUP35	95	40.000	Loxodonta_africana
ENSCING00000009659	-	97	41.896	ENSMFAG00000000834	NUP35	99	41.538	Macaca_fascicularis
ENSCING00000009659	-	97	41.896	ENSMMUG00000004140	NUP35	98	41.896	Macaca_mulatta
ENSCING00000009659	-	97	41.896	ENSMNEG00000029014	NUP35	95	41.896	Macaca_nemestrina
ENSCING00000009659	-	97	41.896	ENSMLEG00000035422	NUP35	99	41.538	Mandrillus_leucophaeus
ENSCING00000009659	-	97	41.824	ENSMAMG00000013232	nup35	97	41.824	Mastacembelus_armatus
ENSCING00000009659	-	97	43.590	ENSMZEG00005020619	nup35	95	42.808	Maylandia_zebra
ENSCING00000009659	-	97	42.587	ENSMGAG00000004412	NUP35	94	42.991	Meleagris_gallopavo
ENSCING00000009659	-	97	42.105	ENSMAUG00000013776	-	95	42.105	Mesocricetus_auratus
ENSCING00000009659	-	97	41.615	ENSMICG00000006790	NUP35	99	41.846	Microcebus_murinus
ENSCING00000009659	-	97	41.486	ENSMOCG00000014754	-	95	41.486	Microtus_ochrogaster
ENSCING00000009659	-	98	42.593	ENSMMOG00000005026	nup35	98	42.593	Mola_mola
ENSCING00000009659	-	97	42.945	ENSMODG00000010578	NUP35	95	42.945	Monodelphis_domestica
ENSCING00000009659	-	97	42.308	ENSMALG00000020187	nup35	97	42.308	Monopterus_albus
ENSCING00000009659	-	97	41.066	MGP_CAROLIEiJ_G0023709	-	95	41.066	Mus_caroli
ENSCING00000009659	-	97	41.693	ENSMUSG00000026999	Nup35	95	41.693	Mus_musculus
ENSCING00000009659	-	97	41.195	MGP_PahariEiJ_G0025160	-	95	41.195	Mus_pahari
ENSCING00000009659	-	79	39.116	MGP_SPRETEiJ_G0033063	-	96	39.116	Mus_spretus
ENSCING00000009659	-	97	41.975	ENSMPUG00000002063	NUP35	95	43.210	Mustela_putorius_furo
ENSCING00000009659	-	97	42.202	ENSMLUG00000013154	NUP35	95	42.202	Myotis_lucifugus
ENSCING00000009659	-	97	41.824	ENSNGAG00000012107	-	95	41.824	Nannospalax_galili
ENSCING00000009659	-	97	41.509	ENSNBRG00000020466	nup35	96	43.082	Neolamprologus_brichardi
ENSCING00000009659	-	97	41.896	ENSNLEG00000035026	NUP35	99	47.805	Nomascus_leucogenys
ENSCING00000009659	-	61	34.826	ENSMEUG00000003001	-	61	34.826	Notamacropus_eugenii
ENSCING00000009659	-	79	43.985	ENSOPRG00000016609	NUP35	78	43.985	Ochotona_princeps
ENSCING00000009659	-	78	33.208	ENSODEG00000000280	-	81	33.208	Octodon_degus
ENSCING00000009659	-	99	42.262	ENSODEG00000011202	-	98	42.262	Octodon_degus
ENSCING00000009659	-	97	42.500	ENSONIG00000016251	nup35	97	42.857	Oreochromis_niloticus
ENSCING00000009659	-	72	46.250	ENSOANG00000006793	-	95	46.250	Ornithorhynchus_anatinus
ENSCING00000009659	-	97	42.547	ENSOCUG00000014407	NUP35	95	42.547	Oryctolagus_cuniculus
ENSCING00000009659	-	97	43.168	ENSORLG00000013588	nup35	99	42.812	Oryzias_latipes
ENSCING00000009659	-	97	43.168	ENSORLG00020008201	nup35	97	43.168	Oryzias_latipes_hni
ENSCING00000009659	-	97	42.462	ENSORLG00015011096	nup35	99	42.105	Oryzias_latipes_hsok
ENSCING00000009659	-	97	42.857	ENSOMEG00000007628	nup35	97	42.857	Oryzias_melastigma
ENSCING00000009659	-	97	41.615	ENSOGAG00000011920	NUP35	95	42.508	Otolemur_garnettii
ENSCING00000009659	-	97	42.683	ENSOARG00000016728	NUP35	95	42.683	Ovis_aries
ENSCING00000009659	-	97	41.896	ENSPPAG00000036316	NUP35	99	41.538	Pan_paniscus
ENSCING00000009659	-	97	41.515	ENSPPRG00000024726	NUP35	99	42.415	Panthera_pardus
ENSCING00000009659	-	97	41.515	ENSPTIG00000017299	NUP35	95	42.769	Panthera_tigris_altaica
ENSCING00000009659	-	97	41.896	ENSPTRG00000012711	NUP35	99	41.538	Pan_troglodytes
ENSCING00000009659	-	97	41.896	ENSPANG00000013686	NUP35	95	41.896	Papio_anubis
ENSCING00000009659	-	97	43.333	ENSPKIG00000022051	nup35	98	43.333	Paramormyrops_kingsleyae
ENSCING00000009659	-	97	42.154	ENSPSIG00000002146	NUP35	99	42.154	Pelodiscus_sinensis
ENSCING00000009659	-	97	42.405	ENSPMGG00000022915	nup35	97	41.956	Periophthalmus_magnuspinnatus
ENSCING00000009659	-	97	41.486	ENSPEMG00000014718	-	95	41.486	Peromyscus_maniculatus_bairdii
ENSCING00000009659	-	97	38.757	ENSPMAG00000006604	nup35	96	38.757	Petromyzon_marinus
ENSCING00000009659	-	97	42.453	ENSPCIG00000015482	NUP35	95	42.453	Phascolarctos_cinereus
ENSCING00000009659	-	97	41.905	ENSPFOG00000010020	nup35	97	43.175	Poecilia_formosa
ENSCING00000009659	-	97	41.587	ENSPLAG00000005867	nup35	97	42.857	Poecilia_latipinna
ENSCING00000009659	-	99	41.945	ENSPMEG00000010552	nup35	99	42.553	Poecilia_mexicana
ENSCING00000009659	-	97	43.175	ENSPREG00000021005	nup35	97	43.810	Poecilia_reticulata
ENSCING00000009659	-	97	41.896	ENSPPYG00000012998	-	76	41.896	Pongo_abelii
ENSCING00000009659	-	58	39.785	ENSPCAG00000000605	NUP35	57	39.785	Procavia_capensis
ENSCING00000009659	-	97	41.925	ENSPCOG00000024097	NUP35	95	42.508	Propithecus_coquereli
ENSCING00000009659	-	97	42.553	ENSPVAG00000015908	NUP35	95	42.553	Pteropus_vampyrus
ENSCING00000009659	-	97	43.396	ENSPNYG00000012486	nup35	94	43.396	Pundamilia_nyererei
ENSCING00000009659	-	98	43.284	ENSPNAG00000005181	nup35	98	43.284	Pygocentrus_nattereri
ENSCING00000009659	-	97	42.284	ENSRNOG00000009290	Nup35	95	42.284	Rattus_norvegicus
ENSCING00000009659	-	97	41.896	ENSRBIG00000039427	NUP35	99	41.538	Rhinopithecus_bieti
ENSCING00000009659	-	97	41.896	ENSRROG00000026525	NUP35	88	51.111	Rhinopithecus_roxellana
ENSCING00000009659	-	97	42.508	ENSSBOG00000018676	NUP35	88	52.222	Saimiri_boliviensis_boliviensis
ENSCING00000009659	-	97	41.411	ENSSHAG00000009746	NUP35	95	41.411	Sarcophilus_harrisii
ENSCING00000009659	-	97	42.727	ENSSFOG00015002390	nup35	97	42.727	Scleropages_formosus
ENSCING00000009659	-	97	42.308	ENSSMAG00000015651	nup35	97	42.308	Scophthalmus_maximus
ENSCING00000009659	-	97	43.269	ENSSDUG00000013118	nup35	97	43.910	Seriola_dumerili
ENSCING00000009659	-	97	43.269	ENSSLDG00000018249	nup35	97	43.910	Seriola_lalandi_dorsalis
ENSCING00000009659	-	61	39.130	ENSSARG00000001535	-	66	39.130	Sorex_araneus
ENSCING00000009659	-	97	41.994	ENSSPUG00000018651	NUP35	95	41.994	Sphenodon_punctatus
ENSCING00000009659	-	98	40.498	ENSSPAG00000018264	nup35	97	40.854	Stegastes_partitus
ENSCING00000009659	-	97	42.945	ENSSSCG00000028949	NUP35	95	42.945	Sus_scrofa
ENSCING00000009659	-	97	41.846	ENSTGUG00000011278	NUP35	96	41.846	Taeniopygia_guttata
ENSCING00000009659	-	91	39.672	ENSTRUG00000014111	nup35	98	39.672	Takifugu_rubripes
ENSCING00000009659	-	98	37.383	ENSTNIG00000011568	nup35	95	37.383	Tetraodon_nigroviridis
ENSCING00000009659	-	97	41.411	ENSTBEG00000003328	NUP35	95	41.411	Tupaia_belangeri
ENSCING00000009659	-	97	36.278	ENSTTRG00000002512	NUP35	94	36.278	Tursiops_truncatus
ENSCING00000009659	-	55	51.667	ENSUAMG00000018696	-	85	51.667	Ursus_americanus
ENSCING00000009659	-	90	40.523	ENSUMAG00000017104	NUP35	95	41.860	Ursus_maritimus
ENSCING00000009659	-	97	41.896	ENSVPAG00000011898	NUP35	95	41.896	Vicugna_pacos
ENSCING00000009659	-	97	42.331	ENSVVUG00000016832	NUP35	99	42.331	Vulpes_vulpes
ENSCING00000009659	-	99	34.211	ENSXETG00000001335	nup35	99	34.211	Xenopus_tropicalis
ENSCING00000009659	-	97	42.222	ENSXMAG00000000409	nup35	97	43.492	Xiphophorus_maculatus