EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009762 (Gene tree)
Gene ID: 100186134
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 9645 bases
Position: chrHT000174.1:69921-79565
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019832	RRM_1	PF00076.22	3.8e-35	1	2
ENSCINP00000019832	RRM_1	PF00076.22	3.8e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019832	-	3014	-	ENSCINP00000019832	896 (aa)	-	F6ZTJ9

Gene Model

Click here to download ENSCING00000009762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009762	-	98	39.444	ENSG00000075856	SART3	95	55.660	Homo_sapiens
ENSCING00000009762	-	98	37.017	ENSAPOG00000007242	sart3	94	37.680	Acanthochromis_polyacanthus
ENSCING00000009762	-	98	38.616	ENSAMEG00000016374	SART3	90	38.616	Ailuropoda_melanoleuca
ENSCING00000009762	-	98	37.459	ENSACIG00000016452	sart3	94	37.652	Amphilophus_citrinellus
ENSCING00000009762	-	98	37.973	ENSAOCG00000015094	sart3	94	38.803	Amphiprion_ocellaris
ENSCING00000009762	-	98	37.973	ENSAPEG00000023696	sart3	94	38.803	Amphiprion_percula
ENSCING00000009762	-	91	39.445	ENSATEG00000009882	sart3	92	39.445	Anabas_testudineus
ENSCING00000009762	-	97	36.618	ENSAPLG00000006205	SART3	99	36.618	Anas_platyrhynchos
ENSCING00000009762	-	86	43.385	ENSACAG00000001176	SART3	90	39.297	Anolis_carolinensis
ENSCING00000009762	-	98	39.111	ENSANAG00000025967	SART3	90	39.111	Aotus_nancymaae
ENSCING00000009762	-	98	38.938	ENSACLG00000025832	sart3	94	38.938	Astatotilapia_calliptera
ENSCING00000009762	-	99	39.348	ENSAMXG00000019143	sart3	92	39.073	Astyanax_mexicanus
ENSCING00000009762	-	99	39.711	ENSBTAG00000031846	SART3	90	39.597	Bos_taurus
ENSCING00000009762	-	98	39.778	ENSCJAG00000015330	SART3	90	39.778	Callithrix_jacchus
ENSCING00000009762	-	98	38.932	ENSCAFG00000011352	SART3	80	38.827	Canis_familiaris
ENSCING00000009762	-	98	39.038	ENSCAFG00020022271	SART3	90	39.038	Canis_lupus_dingo
ENSCING00000009762	-	99	39.912	ENSCHIG00000021385	SART3	90	39.800	Capra_hircus
ENSCING00000009762	-	98	39.262	ENSTSYG00000013923	SART3	90	39.441	Carlito_syrichta
ENSCING00000009762	-	56	42.744	ENSCAPG00000013404	SART3	98	38.907	Cavia_aperea
ENSCING00000009762	-	57	42.996	ENSCPOG00000010969	SART3	90	39.097	Cavia_porcellus
ENSCING00000009762	-	98	39.333	ENSCCAG00000023667	SART3	90	39.333	Cebus_capucinus
ENSCING00000009762	-	98	39.667	ENSCATG00000041537	SART3	90	39.667	Cercocebus_atys
ENSCING00000009762	-	98	39.691	ENSCLAG00000011727	SART3	90	39.802	Chinchilla_lanigera
ENSCING00000009762	-	98	39.444	ENSCSAG00000002880	SART3	90	39.444	Chlorocebus_sabaeus
ENSCING00000009762	-	90	41.505	ENSCPBG00000006699	SART3	90	41.818	Chrysemys_picta_bellii
ENSCING00000009762	-	98	39.889	ENSCANG00000000411	SART3	90	39.889	Colobus_angolensis_palliatus
ENSCING00000009762	-	98	40.089	ENSCGRG00001020554	Sart3	90	40.089	Cricetulus_griseus_chok1gshd
ENSCING00000009762	-	92	39.692	ENSCGRG00000005968	Sart3	99	39.692	Cricetulus_griseus_crigri
ENSCING00000009762	-	71	45.682	ENSCSEG00000011951	sart3	76	45.584	Cynoglossus_semilaevis
ENSCING00000009762	-	98	38.564	ENSCVAG00000022898	sart3	94	38.674	Cyprinodon_variegatus
ENSCING00000009762	-	98	39.313	ENSDARG00000008032	sart3	94	39.317	Danio_rerio
ENSCING00000009762	-	98	38.042	ENSDNOG00000019498	SART3	90	38.265	Dasypus_novemcinctus
ENSCING00000009762	-	98	40.468	ENSDORG00000014360	Sart3	91	40.468	Dipodomys_ordii
ENSCING00000009762	-	72	48.023	ENSETEG00000011292	SART3	77	48.023	Echinops_telfairi
ENSCING00000009762	-	99	33.297	ENSEBUG00000005658	sart3	91	32.895	Eptatretus_burgeri
ENSCING00000009762	-	98	39.062	ENSEASG00005014500	SART3	90	39.062	Equus_asinus_asinus
ENSCING00000009762	-	98	39.062	ENSECAG00000000314	SART3	90	39.062	Equus_caballus
ENSCING00000009762	-	92	36.817	ENSEEUG00000002954	SART3	84	36.936	Erinaceus_europaeus
ENSCING00000009762	-	98	39.168	ENSELUG00000013025	sart3	94	39.168	Esox_lucius
ENSCING00000009762	-	98	38.717	ENSFCAG00000014041	SART3	90	38.717	Felis_catus
ENSCING00000009762	-	97	41.110	ENSFALG00000008894	SART3	99	41.110	Ficedula_albicollis
ENSCING00000009762	-	98	38.901	ENSFDAG00000014878	SART3	90	38.987	Fukomys_damarensis
ENSCING00000009762	-	98	37.582	ENSFHEG00000015715	sart3	94	38.326	Fundulus_heteroclitus
ENSCING00000009762	-	98	38.717	ENSGMOG00000017859	sart3	97	39.101	Gadus_morhua
ENSCING00000009762	-	98	39.357	ENSGALG00000039472	SART3	94	37.404	Gallus_gallus
ENSCING00000009762	-	98	37.417	ENSGAFG00000018055	sart3	94	37.916	Gambusia_affinis
ENSCING00000009762	-	99	38.717	ENSGACG00000008787	sart3	100	36.364	Gasterosteus_aculeatus
ENSCING00000009762	-	98	40.244	ENSGAGG00000016519	SART3	95	40.839	Gopherus_agassizii
ENSCING00000009762	-	98	39.444	ENSGGOG00000011562	SART3	90	39.444	Gorilla_gorilla
ENSCING00000009762	-	98	38.453	ENSHBUG00000005247	sart3	94	39.006	Haplochromis_burtoni
ENSCING00000009762	-	98	39.174	ENSHGLG00000011579	SART3	90	39.286	Heterocephalus_glaber_female
ENSCING00000009762	-	98	38.367	ENSHGLG00100013263	SART3	90	38.479	Heterocephalus_glaber_male
ENSCING00000009762	-	98	32.103	ENSHCOG00000009693	sart3	93	32.550	Hippocampus_comes
ENSCING00000009762	-	98	39.381	ENSIPUG00000021151	sart3	93	39.491	Ictalurus_punctatus
ENSCING00000009762	-	98	39.756	ENSSTOG00000002376	SART3	90	39.756	Ictidomys_tridecemlineatus
ENSCING00000009762	-	98	39.514	ENSJJAG00000021869	Sart3	89	39.404	Jaculus_jaculus
ENSCING00000009762	-	98	38.804	ENSKMAG00000016864	sart3	94	38.804	Kryptolebias_marmoratus
ENSCING00000009762	-	98	38.839	ENSLBEG00000001263	sart3	94	39.377	Labrus_bergylta
ENSCING00000009762	-	75	35.484	ENSLACG00000007414	SART3	87	35.683	Latimeria_chalumnae
ENSCING00000009762	-	99	40.064	ENSLOCG00000004710	sart3	90	40.303	Lepisosteus_oculatus
ENSCING00000009762	-	98	38.581	ENSLAFG00000007167	SART3	90	38.581	Loxodonta_africana
ENSCING00000009762	-	98	39.778	ENSMFAG00000039887	SART3	90	39.778	Macaca_fascicularis
ENSCING00000009762	-	98	39.778	ENSMMUG00000017124	SART3	90	39.778	Macaca_mulatta
ENSCING00000009762	-	98	39.778	ENSMNEG00000011093	SART3	90	39.778	Macaca_nemestrina
ENSCING00000009762	-	98	39.778	ENSMLEG00000034251	SART3	90	39.778	Mandrillus_leucophaeus
ENSCING00000009762	-	98	38.090	ENSMAMG00000016195	sart3	94	38.589	Mastacembelus_armatus
ENSCING00000009762	-	98	38.496	ENSMZEG00005015248	sart3	94	38.827	Maylandia_zebra
ENSCING00000009762	-	97	40.310	ENSMGAG00000005746	SART3	99	40.601	Meleagris_gallopavo
ENSCING00000009762	-	98	39.734	ENSMAUG00000012434	Sart3	90	39.823	Mesocricetus_auratus
ENSCING00000009762	-	98	39.532	ENSMICG00000013052	SART3	90	39.532	Microcebus_murinus
ENSCING00000009762	-	98	40.089	ENSMOCG00000004078	Sart3	90	40.089	Microtus_ochrogaster
ENSCING00000009762	-	98	37.099	ENSMMOG00000017629	sart3	94	37.099	Mola_mola
ENSCING00000009762	-	98	39.754	ENSMODG00000002859	SART3	90	39.754	Monodelphis_domestica
ENSCING00000009762	-	95	39.720	ENSMALG00000014549	sart3	85	39.837	Monopterus_albus
ENSCING00000009762	-	98	39.597	MGP_CAROLIEiJ_G0027580	Sart3	90	39.597	Mus_caroli
ENSCING00000009762	-	98	39.576	ENSMUSG00000018974	Sart3	90	39.576	Mus_musculus
ENSCING00000009762	-	94	40.607	MGP_PahariEiJ_G0024162	Sart3	90	39.597	Mus_pahari
ENSCING00000009762	-	98	39.709	MGP_SPRETEiJ_G0028578	Sart3	90	39.709	Mus_spretus
ENSCING00000009762	-	98	38.573	ENSMPUG00000003402	SART3	82	38.573	Mustela_putorius_furo
ENSCING00000009762	-	98	38.706	ENSMLUG00000007906	SART3	90	38.706	Myotis_lucifugus
ENSCING00000009762	-	98	40.134	ENSNGAG00000014773	Sart3	90	40.134	Nannospalax_galili
ENSCING00000009762	-	98	38.606	ENSNBRG00000008526	sart3	95	38.938	Neolamprologus_brichardi
ENSCING00000009762	-	98	39.889	ENSNLEG00000006767	SART3	90	39.889	Nomascus_leucogenys
ENSCING00000009762	-	97	37.273	ENSMEUG00000006799	SART3	99	37.273	Notamacropus_eugenii
ENSCING00000009762	-	98	38.539	ENSOPRG00000015817	SART3	89	38.539	Ochotona_princeps
ENSCING00000009762	-	98	38.913	ENSODEG00000008547	SART3	90	39.313	Octodon_degus
ENSCING00000009762	-	98	39.207	ENSONIG00000013413	sart3	94	39.207	Oreochromis_niloticus
ENSCING00000009762	-	97	40.158	ENSOANG00000008794	SART3	99	40.158	Ornithorhynchus_anatinus
ENSCING00000009762	-	98	39.844	ENSOCUG00000016285	SART3	90	39.844	Oryctolagus_cuniculus
ENSCING00000009762	-	98	38.419	ENSORLG00000006895	sart3	94	38.419	Oryzias_latipes
ENSCING00000009762	-	98	38.419	ENSORLG00020015473	sart3	94	38.649	Oryzias_latipes_hni
ENSCING00000009762	-	98	38.200	ENSORLG00015003914	sart3	94	38.200	Oryzias_latipes_hsok
ENSCING00000009762	-	98	39.579	ENSOMEG00000002174	sart3	94	39.579	Oryzias_melastigma
ENSCING00000009762	-	98	39.073	ENSOGAG00000000932	SART3	90	39.183	Otolemur_garnettii
ENSCING00000009762	-	99	39.978	ENSOARG00000018082	SART3	90	39.866	Ovis_aries
ENSCING00000009762	-	98	39.889	ENSPPAG00000041812	SART3	90	39.889	Pan_paniscus
ENSCING00000009762	-	98	38.717	ENSPPRG00000001579	SART3	90	38.717	Panthera_pardus
ENSCING00000009762	-	98	38.717	ENSPTIG00000021928	SART3	90	38.717	Panthera_tigris_altaica
ENSCING00000009762	-	98	39.778	ENSPTRG00000005404	SART3	90	39.778	Pan_troglodytes
ENSCING00000009762	-	98	39.778	ENSPANG00000024915	SART3	90	39.778	Papio_anubis
ENSCING00000009762	-	99	37.665	ENSPKIG00000025203	sart3	94	38.307	Paramormyrops_kingsleyae
ENSCING00000009762	-	56	42.970	ENSPSIG00000002594	SART3	99	40.167	Pelodiscus_sinensis
ENSCING00000009762	-	99	39.514	ENSPMGG00000018729	sart3	94	39.441	Periophthalmus_magnuspinnatus
ENSCING00000009762	-	97	39.140	ENSPEMG00000020811	-	93	39.367	Peromyscus_maniculatus_bairdii
ENSCING00000009762	-	98	40.112	ENSPCIG00000023889	SART3	90	40.134	Phascolarctos_cinereus
ENSCING00000009762	-	98	38.504	ENSPFOG00000010290	sart3	94	38.614	Poecilia_formosa
ENSCING00000009762	-	98	38.504	ENSPLAG00000002711	sart3	94	38.504	Poecilia_latipinna
ENSCING00000009762	-	58	42.278	ENSPMEG00000000456	sart3	94	38.043	Poecilia_mexicana
ENSCING00000009762	-	98	37.802	ENSPREG00000022086	sart3	94	38.571	Poecilia_reticulata
ENSCING00000009762	-	98	39.491	ENSPPYG00000004919	SART3	90	39.491	Pongo_abelii
ENSCING00000009762	-	92	35.196	ENSPCAG00000007505	SART3	84	35.196	Procavia_capensis
ENSCING00000009762	-	98	34.701	ENSPCOG00000014016	SART3	89	34.812	Propithecus_coquereli
ENSCING00000009762	-	98	35.801	ENSPVAG00000007442	SART3	90	35.801	Pteropus_vampyrus
ENSCING00000009762	-	98	38.581	ENSPNYG00000015653	sart3	94	38.938	Pundamilia_nyererei
ENSCING00000009762	-	99	39.935	ENSPNAG00000001851	sart3	94	40.196	Pygocentrus_nattereri
ENSCING00000009762	-	98	39.644	ENSRNOG00000000702	Sart3	90	39.644	Rattus_norvegicus
ENSCING00000009762	-	98	39.333	ENSRBIG00000034143	SART3	90	39.333	Rhinopithecus_bieti
ENSCING00000009762	-	98	39.444	ENSRROG00000003629	SART3	90	39.444	Rhinopithecus_roxellana
ENSCING00000009762	-	98	37.844	ENSSBOG00000033093	SART3	90	37.844	Saimiri_boliviensis_boliviensis
ENSCING00000009762	-	97	39.910	ENSSHAG00000010864	SART3	99	39.775	Sarcophilus_harrisii
ENSCING00000009762	-	98	38.571	ENSSFOG00015004012	sart3	91	38.895	Scleropages_formosus
ENSCING00000009762	-	98	38.170	ENSSMAG00000014666	sart3	94	38.170	Scophthalmus_maximus
ENSCING00000009762	-	98	38.944	ENSSDUG00000011664	sart3	94	38.742	Seriola_dumerili
ENSCING00000009762	-	98	38.901	ENSSLDG00000024990	sart3	88	39.011	Seriola_lalandi_dorsalis
ENSCING00000009762	-	76	42.996	ENSSARG00000005401	SART3	73	42.775	Sorex_araneus
ENSCING00000009762	-	57	44.706	ENSSPUG00000009541	SART3	92	41.676	Sphenodon_punctatus
ENSCING00000009762	-	98	38.674	ENSSPAG00000010658	sart3	94	38.674	Stegastes_partitus
ENSCING00000009762	-	98	38.090	ENSSSCG00000009946	SART3	90	39.155	Sus_scrofa
ENSCING00000009762	-	98	41.685	ENSTGUG00000006905	SART3	99	41.834	Taeniopygia_guttata
ENSCING00000009762	-	98	37.668	ENSTRUG00000014173	sart3	94	37.780	Takifugu_rubripes
ENSCING00000009762	-	99	38.196	ENSTNIG00000015867	sart3	99	38.170	Tetraodon_nigroviridis
ENSCING00000009762	-	93	36.417	ENSTBEG00000008888	SART3	89	36.417	Tupaia_belangeri
ENSCING00000009762	-	98	39.532	ENSTTRG00000003993	SART3	90	39.532	Tursiops_truncatus
ENSCING00000009762	-	98	38.685	ENSUAMG00000023906	SART3	90	38.685	Ursus_americanus
ENSCING00000009762	-	98	38.796	ENSUMAG00000005844	SART3	97	38.796	Ursus_maritimus
ENSCING00000009762	-	98	39.082	ENSVVUG00000008216	SART3	90	38.932	Vulpes_vulpes
ENSCING00000009762	-	98	38.976	ENSXETG00000017645	sart3	96	39.231	Xenopus_tropicalis
ENSCING00000009762	-	98	36.790	ENSXCOG00000017212	sart3	94	37.307	Xiphophorus_couchianus
ENSCING00000009762	-	98	37.665	ENSXMAG00000018160	sart3	94	37.996	Xiphophorus_maculatus