EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009812 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1171 bases
Position: chr2:3259152-3260322
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019931	RNA_pol_A_bac	PF01000.26	2.9e-10	1	1
ENSCINP00000019931	RNA_pol_L	PF01193.24	9.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019931	-	930	-	ENSCINP00000019931	151 (aa)	-	F6Y5Q3

Gene Model

Click here to download ENSCING00000009812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009812's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009812	-	100	69.536	ENSG00000102978	POLR2C	54	69.536	Homo_sapiens
ENSCING00000009812	-	100	66.887	ENSAPOG00000011708	polr2c	55	66.887	Acanthochromis_polyacanthus
ENSCING00000009812	-	100	69.536	ENSAMEG00000017026	POLR2C	54	69.536	Ailuropoda_melanoleuca
ENSCING00000009812	-	100	66.887	ENSACIG00000012060	polr2c	54	66.887	Amphilophus_citrinellus
ENSCING00000009812	-	100	66.887	ENSAOCG00000010477	-	54	66.887	Amphiprion_ocellaris
ENSCING00000009812	-	100	66.887	ENSAOCG00000015665	polr2c	54	66.887	Amphiprion_ocellaris
ENSCING00000009812	-	100	66.887	ENSAOCG00000018000	-	56	66.887	Amphiprion_ocellaris
ENSCING00000009812	-	100	66.887	ENSAPEG00000007221	polr2c	54	66.887	Amphiprion_percula
ENSCING00000009812	-	100	66.887	ENSATEG00000007143	polr2c	54	66.887	Anabas_testudineus
ENSCING00000009812	-	100	69.536	ENSAPLG00000005385	POLR2C	54	69.536	Anas_platyrhynchos
ENSCING00000009812	-	100	69.536	ENSACAG00000007514	-	54	69.536	Anolis_carolinensis
ENSCING00000009812	-	100	69.536	ENSANAG00000005302	POLR2C	54	69.536	Aotus_nancymaae
ENSCING00000009812	-	100	66.887	ENSACLG00000004854	polr2c	54	66.887	Astatotilapia_calliptera
ENSCING00000009812	-	100	68.212	ENSAMXG00000012805	polr2c	54	68.212	Astyanax_mexicanus
ENSCING00000009812	-	100	69.536	ENSBTAG00000001856	POLR2C	54	69.536	Bos_taurus
ENSCING00000009812	-	100	69.536	ENSCJAG00000012016	POLR2C	54	69.536	Callithrix_jacchus
ENSCING00000009812	-	100	69.536	ENSCAFG00000008720	POLR2C	54	69.536	Canis_familiaris
ENSCING00000009812	-	100	69.536	ENSCAFG00020007660	POLR2C	54	69.536	Canis_lupus_dingo
ENSCING00000009812	-	100	69.536	ENSCHIG00000012072	POLR2C	54	69.536	Capra_hircus
ENSCING00000009812	-	100	70.199	ENSTSYG00000011076	POLR2C	54	70.199	Carlito_syrichta
ENSCING00000009812	-	100	69.536	ENSCAPG00000006608	POLR2C	64	69.536	Cavia_aperea
ENSCING00000009812	-	100	69.536	ENSCPOG00000004554	POLR2C	54	69.536	Cavia_porcellus
ENSCING00000009812	-	100	69.536	ENSCCAG00000035768	POLR2C	54	69.536	Cebus_capucinus
ENSCING00000009812	-	100	69.536	ENSCATG00000040803	POLR2C	54	69.536	Cercocebus_atys
ENSCING00000009812	-	100	69.536	ENSCLAG00000013676	POLR2C	54	69.536	Chinchilla_lanigera
ENSCING00000009812	-	100	69.536	ENSCSAG00000004901	POLR2C	54	69.536	Chlorocebus_sabaeus
ENSCING00000009812	-	100	69.536	ENSCHOG00000002986	POLR2C	55	69.536	Choloepus_hoffmanni
ENSCING00000009812	-	100	69.536	ENSCPBG00000022758	POLR2C	56	69.536	Chrysemys_picta_bellii
ENSCING00000009812	-	90	87.097	ENSCING00000021895	-	54	87.097	Ciona_intestinalis
ENSCING00000009812	-	100	94.040	ENSCSAVG00000002167	-	100	92.373	Ciona_savignyi
ENSCING00000009812	-	100	69.536	ENSCANG00000034876	POLR2C	54	69.536	Colobus_angolensis_palliatus
ENSCING00000009812	-	100	69.536	ENSCGRG00001019477	Polr2c	54	69.536	Cricetulus_griseus_chok1gshd
ENSCING00000009812	-	100	69.536	ENSCGRG00000013273	Polr2c	54	69.536	Cricetulus_griseus_crigri
ENSCING00000009812	-	100	66.887	ENSCSEG00000001719	polr2c	54	66.887	Cynoglossus_semilaevis
ENSCING00000009812	-	100	68.212	ENSCVAG00000004718	-	54	68.212	Cyprinodon_variegatus
ENSCING00000009812	-	100	66.887	ENSDARG00000033596	polr2c	54	66.887	Danio_rerio
ENSCING00000009812	-	87	45.185	ENSDNOG00000036028	-	50	45.185	Dasypus_novemcinctus
ENSCING00000009812	-	100	69.536	ENSDORG00000000081	Polr2c	54	69.536	Dipodomys_ordii
ENSCING00000009812	-	99	62.914	FBgn0026373	RpII33	54	62.914	Drosophila_melanogaster
ENSCING00000009812	-	100	69.536	ENSETEG00000004185	POLR2C	54	69.536	Echinops_telfairi
ENSCING00000009812	-	100	72.848	ENSEBUG00000016262	polr2c	59	72.848	Eptatretus_burgeri
ENSCING00000009812	-	100	68.874	ENSEASG00005005406	POLR2C	54	68.874	Equus_asinus_asinus
ENSCING00000009812	-	100	69.536	ENSECAG00000015818	POLR2C	54	69.536	Equus_caballus
ENSCING00000009812	-	100	69.536	ENSEEUG00000003658	POLR2C	54	69.536	Erinaceus_europaeus
ENSCING00000009812	-	100	66.887	ENSELUG00000012259	polr2c	58	66.887	Esox_lucius
ENSCING00000009812	-	100	69.536	ENSFCAG00000034622	POLR2C	54	69.536	Felis_catus
ENSCING00000009812	-	100	70.199	ENSFALG00000006931	POLR2C	54	70.199	Ficedula_albicollis
ENSCING00000009812	-	100	69.536	ENSFDAG00000008641	POLR2C	56	69.536	Fukomys_damarensis
ENSCING00000009812	-	100	68.212	ENSFHEG00000020739	polr2c	54	68.212	Fundulus_heteroclitus
ENSCING00000009812	-	100	66.887	ENSGMOG00000004203	polr2c	54	66.887	Gadus_morhua
ENSCING00000009812	-	100	69.536	ENSGALG00000001168	POLR2C	54	69.536	Gallus_gallus
ENSCING00000009812	-	100	68.212	ENSGAFG00000021951	polr2c	54	68.212	Gambusia_affinis
ENSCING00000009812	-	100	66.225	ENSGACG00000002194	polr2c	54	66.225	Gasterosteus_aculeatus
ENSCING00000009812	-	100	69.536	ENSGAGG00000016942	POLR2C	53	69.536	Gopherus_agassizii
ENSCING00000009812	-	100	69.536	ENSGGOG00000012415	POLR2C	54	69.536	Gorilla_gorilla
ENSCING00000009812	-	100	66.887	ENSHBUG00000023040	polr2c	54	66.887	Haplochromis_burtoni
ENSCING00000009812	-	100	69.536	ENSHGLG00000013465	POLR2C	54	69.536	Heterocephalus_glaber_female
ENSCING00000009812	-	100	69.536	ENSHGLG00100011949	POLR2C	54	69.536	Heterocephalus_glaber_male
ENSCING00000009812	-	100	65.563	ENSHCOG00000007066	polr2c	54	65.563	Hippocampus_comes
ENSCING00000009812	-	100	68.212	ENSIPUG00000009231	polr2c	54	68.212	Ictalurus_punctatus
ENSCING00000009812	-	100	69.536	ENSSTOG00000015150	-	54	69.536	Ictidomys_tridecemlineatus
ENSCING00000009812	-	91	70.803	ENSSTOG00000031354	-	53	70.803	Ictidomys_tridecemlineatus
ENSCING00000009812	-	100	69.536	ENSJJAG00000023057	Polr2c	54	69.536	Jaculus_jaculus
ENSCING00000009812	-	100	68.212	ENSKMAG00000016196	polr2c	54	68.212	Kryptolebias_marmoratus
ENSCING00000009812	-	100	66.225	ENSLBEG00000007369	polr2c	54	66.225	Labrus_bergylta
ENSCING00000009812	-	100	52.525	ENSLACG00000003703	POLR2C	61	52.525	Latimeria_chalumnae
ENSCING00000009812	-	100	67.550	ENSLOCG00000003215	polr2c	54	67.550	Lepisosteus_oculatus
ENSCING00000009812	-	100	68.874	ENSLAFG00000027230	POLR2C	54	68.874	Loxodonta_africana
ENSCING00000009812	-	100	69.536	ENSMFAG00000016861	POLR2C	55	69.536	Macaca_fascicularis
ENSCING00000009812	-	100	69.536	ENSMMUG00000020474	POLR2C	55	69.536	Macaca_mulatta
ENSCING00000009812	-	100	69.536	ENSMNEG00000033565	POLR2C	54	69.536	Macaca_nemestrina
ENSCING00000009812	-	100	69.536	ENSMLEG00000032412	POLR2C	54	69.536	Mandrillus_leucophaeus
ENSCING00000009812	-	100	67.550	ENSMAMG00000013205	polr2c	54	67.550	Mastacembelus_armatus
ENSCING00000009812	-	100	66.887	ENSMZEG00005015329	polr2c	54	66.887	Maylandia_zebra
ENSCING00000009812	-	100	56.954	ENSMAUG00000000779	-	50	56.954	Mesocricetus_auratus
ENSCING00000009812	-	95	56.944	ENSMAUG00000019031	-	51	56.944	Mesocricetus_auratus
ENSCING00000009812	-	100	69.536	ENSMICG00000045178	POLR2C	54	69.536	Microcebus_murinus
ENSCING00000009812	-	100	68.212	ENSMOCG00000013652	Polr2c	54	68.212	Microtus_ochrogaster
ENSCING00000009812	-	100	67.550	ENSMMOG00000010560	polr2c	54	67.550	Mola_mola
ENSCING00000009812	-	100	68.874	ENSMODG00000013540	POLR2C	54	68.874	Monodelphis_domestica
ENSCING00000009812	-	100	67.550	ENSMALG00000004581	polr2c	54	67.550	Monopterus_albus
ENSCING00000009812	-	100	69.536	MGP_CAROLIEiJ_G0031409	Polr2c	54	69.536	Mus_caroli
ENSCING00000009812	-	100	69.536	ENSMUSG00000031783	Polr2c	60	70.130	Mus_musculus
ENSCING00000009812	-	100	69.536	MGP_PahariEiJ_G0023007	Polr2c	54	69.536	Mus_pahari
ENSCING00000009812	-	100	69.536	MGP_SPRETEiJ_G0032528	Polr2c	54	69.536	Mus_spretus
ENSCING00000009812	-	100	69.536	ENSMPUG00000004483	POLR2C	54	69.536	Mustela_putorius_furo
ENSCING00000009812	-	100	68.874	ENSMLUG00000025422	-	54	68.874	Myotis_lucifugus
ENSCING00000009812	-	100	68.874	ENSMLUG00000015833	-	54	68.874	Myotis_lucifugus
ENSCING00000009812	-	100	68.874	ENSMLUG00000023530	-	77	68.874	Myotis_lucifugus
ENSCING00000009812	-	100	68.874	ENSMLUG00000029495	-	54	68.874	Myotis_lucifugus
ENSCING00000009812	-	100	69.536	ENSNGAG00000012249	-	55	69.536	Nannospalax_galili
ENSCING00000009812	-	100	54.967	ENSNGAG00000010540	-	54	54.967	Nannospalax_galili
ENSCING00000009812	-	100	53.642	ENSNLEG00000003034	POLR2C	50	53.642	Nomascus_leucogenys
ENSCING00000009812	-	100	68.212	ENSMEUG00000014741	POLR2C	54	68.212	Notamacropus_eugenii
ENSCING00000009812	-	100	69.536	ENSOPRG00000006979	POLR2C	54	69.536	Ochotona_princeps
ENSCING00000009812	-	100	69.536	ENSODEG00000016934	POLR2C	54	69.536	Octodon_degus
ENSCING00000009812	-	100	66.887	ENSONIG00000010914	polr2c	54	66.887	Oreochromis_niloticus
ENSCING00000009812	-	100	68.874	ENSOANG00000009337	POLR2C	65	68.874	Ornithorhynchus_anatinus
ENSCING00000009812	-	100	69.536	ENSOCUG00000014984	POLR2C	54	69.536	Oryctolagus_cuniculus
ENSCING00000009812	-	100	66.887	ENSORLG00000015108	polr2c	54	66.887	Oryzias_latipes
ENSCING00000009812	-	100	66.887	ENSORLG00020013566	polr2c	54	66.887	Oryzias_latipes_hni
ENSCING00000009812	-	100	66.887	ENSORLG00015003751	polr2c	54	66.887	Oryzias_latipes_hsok
ENSCING00000009812	-	100	67.550	ENSOMEG00000019444	polr2c	54	67.550	Oryzias_melastigma
ENSCING00000009812	-	100	70.199	ENSOGAG00000016866	POLR2C	54	70.199	Otolemur_garnettii
ENSCING00000009812	-	100	69.536	ENSOARG00000000302	POLR2C	54	69.536	Ovis_aries
ENSCING00000009812	-	100	69.536	ENSPPAG00000042822	POLR2C	55	69.536	Pan_paniscus
ENSCING00000009812	-	100	69.536	ENSPPRG00000003215	POLR2C	54	69.536	Panthera_pardus
ENSCING00000009812	-	100	69.536	ENSPTIG00000010297	POLR2C	54	69.536	Panthera_tigris_altaica
ENSCING00000009812	-	100	69.536	ENSPTRG00000008157	POLR2C	55	69.536	Pan_troglodytes
ENSCING00000009812	-	100	69.536	ENSPANG00000006264	POLR2C	54	69.536	Papio_anubis
ENSCING00000009812	-	100	68.212	ENSPKIG00000005228	polr2c	54	68.212	Paramormyrops_kingsleyae
ENSCING00000009812	-	100	69.536	ENSPSIG00000016112	POLR2C	55	69.536	Pelodiscus_sinensis
ENSCING00000009812	-	100	69.536	ENSPEMG00000014204	Polr2c	54	69.536	Peromyscus_maniculatus_bairdii
ENSCING00000009812	-	100	68.874	ENSPCIG00000015111	POLR2C	54	68.874	Phascolarctos_cinereus
ENSCING00000009812	-	100	68.212	ENSPFOG00000024666	polr2c	54	68.212	Poecilia_formosa
ENSCING00000009812	-	100	68.212	ENSPLAG00000019750	polr2c	54	68.212	Poecilia_latipinna
ENSCING00000009812	-	100	68.212	ENSPMEG00000001741	polr2c	54	68.212	Poecilia_mexicana
ENSCING00000009812	-	100	68.212	ENSPREG00000003090	polr2c	55	68.212	Poecilia_reticulata
ENSCING00000009812	-	100	69.536	ENSPPYG00000007390	POLR2C	54	69.536	Pongo_abelii
ENSCING00000009812	-	100	69.536	ENSPCAG00000002423	POLR2C	65	69.536	Procavia_capensis
ENSCING00000009812	-	100	69.536	ENSPCOG00000017282	POLR2C	54	69.536	Propithecus_coquereli
ENSCING00000009812	-	100	69.536	ENSPVAG00000001399	POLR2C	54	69.536	Pteropus_vampyrus
ENSCING00000009812	-	100	66.887	ENSPNYG00000003756	polr2c	54	66.887	Pundamilia_nyererei
ENSCING00000009812	-	100	69.536	ENSPNAG00000012133	polr2c	54	69.536	Pygocentrus_nattereri
ENSCING00000009812	-	100	69.536	ENSRNOG00000015720	Polr2c	54	69.536	Rattus_norvegicus
ENSCING00000009812	-	100	69.536	ENSRBIG00000026549	POLR2C	54	69.536	Rhinopithecus_bieti
ENSCING00000009812	-	100	69.536	ENSRROG00000045745	POLR2C	54	69.536	Rhinopithecus_roxellana
ENSCING00000009812	-	100	69.536	ENSSBOG00000030004	POLR2C	54	69.536	Saimiri_boliviensis_boliviensis
ENSCING00000009812	-	100	66.887	ENSSFOG00015023460	polr2c	54	66.887	Scleropages_formosus
ENSCING00000009812	-	100	68.212	ENSSDUG00000003354	polr2c	56	68.212	Seriola_dumerili
ENSCING00000009812	-	100	68.212	ENSSLDG00000003555	polr2c	54	68.212	Seriola_lalandi_dorsalis
ENSCING00000009812	-	100	68.212	ENSSPUG00000012934	POLR2C	54	68.212	Sphenodon_punctatus
ENSCING00000009812	-	100	66.887	ENSSPAG00000005108	polr2c	55	66.887	Stegastes_partitus
ENSCING00000009812	-	100	69.536	ENSSSCG00000025454	POLR2C	54	69.536	Sus_scrofa
ENSCING00000009812	-	100	70.199	ENSTGUG00000004996	POLR2C	54	70.199	Taeniopygia_guttata
ENSCING00000009812	-	100	70.861	ENSTRUG00000004676	polr2c	54	70.861	Takifugu_rubripes
ENSCING00000009812	-	100	69.536	ENSTNIG00000008851	polr2c	54	69.536	Tetraodon_nigroviridis
ENSCING00000009812	-	100	69.536	ENSTBEG00000009442	POLR2C	54	69.536	Tupaia_belangeri
ENSCING00000009812	-	100	70.199	ENSTTRG00000010060	POLR2C	65	70.199	Tursiops_truncatus
ENSCING00000009812	-	100	69.536	ENSUAMG00000014170	POLR2C	54	69.536	Ursus_americanus
ENSCING00000009812	-	100	69.536	ENSUMAG00000021686	POLR2C	57	69.536	Ursus_maritimus
ENSCING00000009812	-	70	69.524	ENSVPAG00000007590	POLR2C	57	69.524	Vicugna_pacos
ENSCING00000009812	-	87	72.519	ENSVVUG00000023516	-	50	72.519	Vulpes_vulpes
ENSCING00000009812	-	69	69.231	ENSVVUG00000003058	-	67	69.231	Vulpes_vulpes
ENSCING00000009812	-	98	68.243	ENSXETG00000013784	polr2c	53	68.243	Xenopus_tropicalis
ENSCING00000009812	-	100	68.212	ENSXCOG00000020734	polr2c	54	68.212	Xiphophorus_couchianus
ENSCING00000009812	-	100	68.212	ENSXMAG00000015984	polr2c	54	68.212	Xiphophorus_maculatus