EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009826 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5832 bases
Position: chr4:4767068-4772899
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000024699	Ribonuc_L-PSP	PF01042.21	3.2e-21	1	2
ENSCINP00000024699	Ribonuc_L-PSP	PF01042.21	3.2e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024945	-	1608	-	ENSCINP00000024699	536 (aa)	-	F6UE78

Gene Model

Click here to download ENSCING00000009826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009826	-	99	46.831	ENSAPOG00000011305	dph6	80	47.811	Acanthochromis_polyacanthus
ENSCING00000009826	-	80	50.000	ENSAPEG00000016201	dph6	88	50.989	Amphiprion_percula
ENSCING00000009826	-	99	46.384	ENSATEG00000010892	dph6	80	46.359	Anabas_testudineus
ENSCING00000009826	-	100	46.783	ENSACAG00000029596	DPH6	80	46.783	Anolis_carolinensis
ENSCING00000009826	-	94	49.143	ENSACLG00000013133	dph6	80	47.986	Astatotilapia_calliptera
ENSCING00000009826	-	100	46.595	ENSAMXG00000014741	dph6	95	50.226	Astyanax_mexicanus
ENSCING00000009826	-	99	46.573	ENSCPBG00000023858	DPH6	80	46.479	Chrysemys_picta_bellii
ENSCING00000009826	-	80	51.364	ENSCSEG00000004856	dph6	91	51.364	Cynoglossus_semilaevis
ENSCING00000009826	-	80	48.465	ENSDARG00000042839	dph6	91	48.253	Danio_rerio
ENSCING00000009826	-	95	59.274	FBgn0030336	CG1578	58	59.274	Drosophila_melanogaster
ENSCING00000009826	-	99	45.407	ENSELUG00000001148	dph6	84	43.850	Esox_lucius
ENSCING00000009826	-	100	44.618	ENSFALG00000005671	DPH6	80	44.815	Ficedula_albicollis
ENSCING00000009826	-	99	47.285	ENSFHEG00000020233	dph6	80	47.461	Fundulus_heteroclitus
ENSCING00000009826	-	98	46.396	ENSGMOG00000009867	dph6	78	47.232	Gadus_morhua
ENSCING00000009826	-	99	46.410	ENSGALG00000020438	DPH6	79	46.235	Gallus_gallus
ENSCING00000009826	-	97	46.140	ENSGAFG00000019653	dph6	80	46.126	Gambusia_affinis
ENSCING00000009826	-	99	46.931	ENSGACG00000010500	dph6	80	46.931	Gasterosteus_aculeatus
ENSCING00000009826	-	100	46.316	ENSGAGG00000009638	DPH6	80	46.046	Gopherus_agassizii
ENSCING00000009826	-	99	47.857	ENSHBUG00000017591	dph6	80	47.887	Haplochromis_burtoni
ENSCING00000009826	-	82	49.231	ENSHCOG00000001351	dph6	97	49.556	Hippocampus_comes
ENSCING00000009826	-	100	48.029	ENSIPUG00000006675	dph6	80	48.029	Ictalurus_punctatus
ENSCING00000009826	-	80	49.213	ENSLBEG00000028338	dph6	92	48.874	Labrus_bergylta
ENSCING00000009826	-	100	45.213	ENSLOCG00000012210	dph6	80	45.989	Lepisosteus_oculatus
ENSCING00000009826	-	99	47.266	ENSMAMG00000005786	dph6	80	47.018	Mastacembelus_armatus
ENSCING00000009826	-	94	49.143	ENSMZEG00005002494	dph6	80	47.986	Maylandia_zebra
ENSCING00000009826	-	60	44.737	ENSMGAG00000012297	-	97	44.737	Meleagris_gallopavo
ENSCING00000009826	-	81	47.265	ENSMODG00000001333	-	91	47.265	Monodelphis_domestica
ENSCING00000009826	-	80	45.119	ENSNBRG00000023582	dph6	93	44.726	Neolamprologus_brichardi
ENSCING00000009826	-	96	48.983	ENSONIG00000001400	dph6	80	48.063	Oreochromis_niloticus
ENSCING00000009826	-	99	46.277	ENSORLG00000013143	dph6	97	48.936	Oryzias_latipes
ENSCING00000009826	-	99	46.372	ENSORLG00020017769	dph6	80	46.263	Oryzias_latipes_hni
ENSCING00000009826	-	99	46.359	ENSOMEG00000000356	dph6	84	46.250	Oryzias_melastigma
ENSCING00000009826	-	82	49.670	ENSPSIG00000007964	DPH6	99	49.342	Pelodiscus_sinensis
ENSCING00000009826	-	83	49.348	ENSPMGG00000022140	dph6	97	49.348	Periophthalmus_magnuspinnatus
ENSCING00000009826	-	99	47.552	ENSPFOG00000015094	dph6	80	47.544	Poecilia_formosa
ENSCING00000009826	-	80	40.455	ENSPLAG00000021283	-	52	69.643	Poecilia_latipinna
ENSCING00000009826	-	61	66.667	ENSPMEG00000004238	-	74	45.868	Poecilia_mexicana
ENSCING00000009826	-	80	51.214	ENSPNYG00000016746	dph6	91	51.082	Pundamilia_nyererei
ENSCING00000009826	-	100	46.953	ENSPNAG00000008737	dph6	80	46.953	Pygocentrus_nattereri
ENSCING00000009826	-	95	35.753	YLR143W	-	77	34.909	Saccharomyces_cerevisiae
ENSCING00000009826	-	100	45.280	ENSSFOG00015010539	dph6	80	46.290	Scleropages_formosus
ENSCING00000009826	-	99	46.466	ENSSMAG00000018800	dph6	80	46.737	Scophthalmus_maximus
ENSCING00000009826	-	99	45.760	ENSSDUG00000015167	dph6	80	45.567	Seriola_dumerili
ENSCING00000009826	-	99	45.936	ENSSLDG00000021120	dph6	80	45.694	Seriola_lalandi_dorsalis
ENSCING00000009826	-	98	45.504	ENSSPUG00000008460	DPH6	80	44.211	Sphenodon_punctatus
ENSCING00000009826	-	99	46.831	ENSSPAG00000015649	dph6	80	47.636	Stegastes_partitus
ENSCING00000009826	-	99	46.809	ENSTRUG00000014191	dph6	80	46.701	Takifugu_rubripes
ENSCING00000009826	-	100	45.027	ENSXETG00000012897	dph6	79	44.846	Xenopus_tropicalis
ENSCING00000009826	-	99	47.120	ENSXMAG00000009590	dph6	80	47.110	Xiphophorus_maculatus