EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000009858 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1321 bases
Position: chr3:5013509-5014829
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000019978	RNase_T	PF00929.24	6.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000019978	-	749	-	ENSCINP00000019978	205 (aa)	-	F6XG50

Gene Model

Click here to download ENSCING00000009858's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000009858's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000009858	-	87	58.564	ENSG00000076043	REXO2	88	57.831	Homo_sapiens
ENSCING00000009858	-	87	58.564	ENSAMEG00000013263	REXO2	76	58.564	Ailuropoda_melanoleuca
ENSCING00000009858	-	80	59.639	ENSACIG00000023553	smfn	90	59.639	Amphilophus_citrinellus
ENSCING00000009858	-	55	61.404	ENSAOCG00000011565	smfn	70	61.404	Amphiprion_ocellaris
ENSCING00000009858	-	91	59.788	ENSAPEG00000012435	smfn	69	59.788	Amphiprion_percula
ENSCING00000009858	-	95	58.376	ENSATEG00000015385	smfn	71	58.376	Anabas_testudineus
ENSCING00000009858	-	83	59.302	ENSAPLG00000005045	REXO2	84	59.302	Anas_platyrhynchos
ENSCING00000009858	-	97	56.219	ENSACAG00000011631	REXO2	94	55.665	Anolis_carolinensis
ENSCING00000009858	-	87	59.116	ENSANAG00000020834	REXO2	80	57.368	Aotus_nancymaae
ENSCING00000009858	-	56	49.123	ENSANAG00000027457	-	81	49.123	Aotus_nancymaae
ENSCING00000009858	-	88	60.656	ENSACLG00000024566	smfn	88	61.446	Astatotilapia_calliptera
ENSCING00000009858	-	87	58.564	ENSBTAG00000005843	REXO2	76	58.564	Bos_taurus
ENSCING00000009858	-	87	46.629	WBGene00007429	C08B6.8	89	52.941	Caenorhabditis_elegans
ENSCING00000009858	-	87	58.564	ENSCJAG00000012434	REXO2	80	56.842	Callithrix_jacchus
ENSCING00000009858	-	94	55.155	ENSCAFG00000013511	REXO2	82	55.155	Canis_familiaris
ENSCING00000009858	-	94	56.186	ENSCAFG00020002513	REXO2	82	56.186	Canis_lupus_dingo
ENSCING00000009858	-	87	58.564	ENSCHIG00000009264	REXO2	76	58.564	Capra_hircus
ENSCING00000009858	-	83	53.179	ENSTSYG00000027948	-	88	53.179	Carlito_syrichta
ENSCING00000009858	-	87	59.116	ENSTSYG00000002237	REXO2	76	59.116	Carlito_syrichta
ENSCING00000009858	-	80	58.434	ENSCAPG00000006093	REXO2	88	58.434	Cavia_aperea
ENSCING00000009858	-	87	59.116	ENSCPOG00000010548	REXO2	80	57.368	Cavia_porcellus
ENSCING00000009858	-	87	59.669	ENSCCAG00000034979	REXO2	80	57.895	Cebus_capucinus
ENSCING00000009858	-	87	58.564	ENSCATG00000015278	REXO2	76	58.564	Cercocebus_atys
ENSCING00000009858	-	87	59.116	ENSCLAG00000011195	REXO2	77	59.116	Chinchilla_lanigera
ENSCING00000009858	-	87	58.564	ENSCSAG00000002754	REXO2	76	58.564	Chlorocebus_sabaeus
ENSCING00000009858	-	56	52.542	ENSCHOG00000013497	REXO2	84	52.542	Choloepus_hoffmanni
ENSCING00000009858	-	97	53.431	ENSCHOG00000000642	-	86	53.431	Choloepus_hoffmanni
ENSCING00000009858	-	59	57.724	ENSCPBG00000009359	REXO2	85	57.724	Chrysemys_picta_bellii
ENSCING00000009858	-	87	58.564	ENSCANG00000034756	REXO2	76	58.564	Colobus_angolensis_palliatus
ENSCING00000009858	-	87	57.459	ENSCGRG00001013673	-	88	57.459	Cricetulus_griseus_chok1gshd
ENSCING00000009858	-	87	59.116	ENSCGRG00001019814	-	76	59.116	Cricetulus_griseus_chok1gshd
ENSCING00000009858	-	87	56.906	ENSCGRG00001010922	-	88	56.906	Cricetulus_griseus_chok1gshd
ENSCING00000009858	-	87	59.116	ENSCGRG00000006235	Rexo2	76	59.116	Cricetulus_griseus_crigri
ENSCING00000009858	-	84	61.143	ENSCSEG00000007214	smfn	66	59.341	Cynoglossus_semilaevis
ENSCING00000009858	-	80	58.434	ENSCVAG00000012008	smfn	90	58.434	Cyprinodon_variegatus
ENSCING00000009858	-	84	65.143	ENSDARG00000009806	smfn	68	65.143	Danio_rerio
ENSCING00000009858	-	84	59.429	ENSDNOG00000046533	REXO2	84	59.429	Dasypus_novemcinctus
ENSCING00000009858	-	87	59.116	ENSDORG00000011255	Rexo2	76	59.116	Dipodomys_ordii
ENSCING00000009858	-	83	50.289	ENSDORG00000025142	-	89	46.078	Dipodomys_ordii
ENSCING00000009858	-	83	47.399	FBgn0039115	CG10214	82	47.399	Drosophila_melanogaster
ENSCING00000009858	-	87	57.778	ENSEBUG00000013964	REXO2	67	54.592	Eptatretus_burgeri
ENSCING00000009858	-	87	58.564	ENSEASG00005006674	REXO2	76	58.564	Equus_asinus_asinus
ENSCING00000009858	-	87	58.564	ENSECAG00000005988	REXO2	76	58.564	Equus_caballus
ENSCING00000009858	-	85	61.364	ENSELUG00000020072	smfn	61	61.364	Esox_lucius
ENSCING00000009858	-	87	58.564	ENSFCAG00000018632	REXO2	76	58.564	Felis_catus
ENSCING00000009858	-	80	59.880	ENSFALG00000010044	REXO2	83	59.880	Ficedula_albicollis
ENSCING00000009858	-	87	59.116	ENSFDAG00000011764	REXO2	76	59.116	Fukomys_damarensis
ENSCING00000009858	-	87	59.116	ENSGMOG00000006370	smfn	94	59.116	Gadus_morhua
ENSCING00000009858	-	84	61.714	ENSGALG00000035980	REXO2	79	60.870	Gallus_gallus
ENSCING00000009858	-	95	54.315	ENSGAFG00000015349	smfn	70	54.315	Gambusia_affinis
ENSCING00000009858	-	84	59.429	ENSGACG00000020096	smfn	87	59.429	Gasterosteus_aculeatus
ENSCING00000009858	-	88	58.470	ENSGAGG00000021126	REXO2	80	58.470	Gopherus_agassizii
ENSCING00000009858	-	87	58.564	ENSGGOG00000023267	REXO2	77	57.764	Gorilla_gorilla
ENSCING00000009858	-	54	62.500	ENSHBUG00000020097	REXO2	55	62.500	Haplochromis_burtoni
ENSCING00000009858	-	87	58.564	ENSHGLG00000013556	REXO2	76	58.564	Heterocephalus_glaber_female
ENSCING00000009858	-	87	59.116	ENSHGLG00100005257	REXO2	76	59.116	Heterocephalus_glaber_male
ENSCING00000009858	-	80	60.241	ENSHCOG00000007122	smfn	93	60.241	Hippocampus_comes
ENSCING00000009858	-	84	61.714	ENSIPUG00000020440	rexo2	65	61.714	Ictalurus_punctatus
ENSCING00000009858	-	94	56.701	ENSSTOG00000012465	REXO2	82	56.701	Ictidomys_tridecemlineatus
ENSCING00000009858	-	87	59.116	ENSJJAG00000013710	-	76	59.116	Jaculus_jaculus
ENSCING00000009858	-	88	42.857	ENSJJAG00000022605	-	71	42.857	Jaculus_jaculus
ENSCING00000009858	-	84	61.143	ENSKMAG00000016795	smfn	69	56.633	Kryptolebias_marmoratus
ENSCING00000009858	-	80	57.831	ENSLBEG00000006021	smfn	88	57.831	Labrus_bergylta
ENSCING00000009858	-	87	53.552	ENSLACG00000018623	REXO2	75	53.552	Latimeria_chalumnae
ENSCING00000009858	-	91	55.319	ENSLOCG00000002389	smfn	90	55.319	Lepisosteus_oculatus
ENSCING00000009858	-	84	60.000	ENSLAFG00000012451	REXO2	76	59.116	Loxodonta_africana
ENSCING00000009858	-	87	58.564	ENSMFAG00000041155	REXO2	76	58.564	Macaca_fascicularis
ENSCING00000009858	-	87	58.564	ENSMMUG00000012269	REXO2	76	58.564	Macaca_mulatta
ENSCING00000009858	-	87	58.564	ENSMNEG00000033379	REXO2	76	58.564	Macaca_nemestrina
ENSCING00000009858	-	87	58.564	ENSMLEG00000036571	REXO2	76	58.564	Mandrillus_leucophaeus
ENSCING00000009858	-	94	55.897	ENSMAMG00000021209	smfn	71	55.897	Mastacembelus_armatus
ENSCING00000009858	-	88	60.656	ENSMZEG00005023224	-	71	60.656	Maylandia_zebra
ENSCING00000009858	-	88	60.656	ENSMZEG00005020730	REXO2	71	60.656	Maylandia_zebra
ENSCING00000009858	-	67	56.738	ENSMGAG00000003026	REXO2	87	56.738	Meleagris_gallopavo
ENSCING00000009858	-	87	59.116	ENSMAUG00000014576	Rexo2	76	59.116	Mesocricetus_auratus
ENSCING00000009858	-	87	59.116	ENSMICG00000010094	REXO2	76	59.116	Microcebus_murinus
ENSCING00000009858	-	87	59.116	ENSMOCG00000009016	Rexo2	76	59.116	Microtus_ochrogaster
ENSCING00000009858	-	84	60.920	ENSMMOG00000006430	smfn	65	60.920	Mola_mola
ENSCING00000009858	-	87	59.669	ENSMODG00000013913	REXO2	77	59.669	Monodelphis_domestica
ENSCING00000009858	-	96	54.545	ENSMALG00000018130	smfn	57	54.545	Monopterus_albus
ENSCING00000009858	-	87	58.011	MGP_CAROLIEiJ_G0032166	Rexo2	76	58.011	Mus_caroli
ENSCING00000009858	-	87	58.011	ENSMUSG00000032026	Rexo2	76	58.011	Mus_musculus
ENSCING00000009858	-	87	58.011	MGP_PahariEiJ_G0015034	Rexo2	76	58.011	Mus_pahari
ENSCING00000009858	-	87	58.011	MGP_SPRETEiJ_G0033305	Rexo2	76	58.011	Mus_spretus
ENSCING00000009858	-	87	58.564	ENSMPUG00000003947	REXO2	81	56.477	Mustela_putorius_furo
ENSCING00000009858	-	87	58.564	ENSMLUG00000009030	REXO2	76	58.564	Myotis_lucifugus
ENSCING00000009858	-	87	59.669	ENSNGAG00000008819	Rexo2	88	59.669	Nannospalax_galili
ENSCING00000009858	-	80	62.048	ENSNBRG00000006529	smfn	88	62.048	Neolamprologus_brichardi
ENSCING00000009858	-	87	58.564	ENSNLEG00000029745	REXO2	76	58.564	Nomascus_leucogenys
ENSCING00000009858	-	87	59.669	ENSMEUG00000011558	REXO2	83	59.669	Notamacropus_eugenii
ENSCING00000009858	-	85	49.153	ENSODEG00000016046	-	88	49.153	Octodon_degus
ENSCING00000009858	-	80	58.434	ENSODEG00000009750	-	88	58.434	Octodon_degus
ENSCING00000009858	-	88	60.656	ENSONIG00000001954	smfn	79	60.656	Oreochromis_niloticus
ENSCING00000009858	-	87	59.116	ENSOANG00000001754	REXO2	76	59.116	Ornithorhynchus_anatinus
ENSCING00000009858	-	87	59.116	ENSOCUG00000004274	REXO2	72	59.116	Oryctolagus_cuniculus
ENSCING00000009858	-	88	57.143	ENSORLG00000005119	smfn	59	57.143	Oryzias_latipes
ENSCING00000009858	-	88	57.143	ENSORLG00020010121	smfn	59	57.143	Oryzias_latipes_hni
ENSCING00000009858	-	88	57.143	ENSORLG00015015699	smfn	59	57.143	Oryzias_latipes_hsok
ENSCING00000009858	-	93	54.922	ENSOMEG00000016878	REXO2	71	54.922	Oryzias_melastigma
ENSCING00000009858	-	59	59.350	ENSOMEG00000008940	-	86	59.350	Oryzias_melastigma
ENSCING00000009858	-	87	59.116	ENSOGAG00000016860	REXO2	76	59.116	Otolemur_garnettii
ENSCING00000009858	-	84	59.429	ENSOARG00000001040	REXO2	85	58.564	Ovis_aries
ENSCING00000009858	-	87	58.564	ENSPPAG00000039849	REXO2	76	58.564	Pan_paniscus
ENSCING00000009858	-	87	58.564	ENSPPRG00000007255	REXO2	76	58.564	Panthera_pardus
ENSCING00000009858	-	80	57.831	ENSPTIG00000015578	REXO2	88	57.831	Panthera_tigris_altaica
ENSCING00000009858	-	87	58.564	ENSPTRG00000004306	REXO2	76	58.564	Pan_troglodytes
ENSCING00000009858	-	87	58.564	ENSPANG00000010675	REXO2	76	58.564	Papio_anubis
ENSCING00000009858	-	94	55.385	ENSPKIG00000000911	smfn	84	55.215	Paramormyrops_kingsleyae
ENSCING00000009858	-	84	59.429	ENSPSIG00000005151	REXO2	74	54.412	Pelodiscus_sinensis
ENSCING00000009858	-	80	59.036	ENSPMGG00000007442	smfn	88	59.036	Periophthalmus_magnuspinnatus
ENSCING00000009858	-	87	48.370	ENSPEMG00000001421	Rexo2	75	48.370	Peromyscus_maniculatus_bairdii
ENSCING00000009858	-	54	59.292	ENSPMAG00000001022	REXO2	97	59.292	Petromyzon_marinus
ENSCING00000009858	-	99	53.659	ENSPFOG00000017861	smfn	90	57.692	Poecilia_formosa
ENSCING00000009858	-	91	52.128	ENSPLAG00000007327	REXO2	71	52.128	Poecilia_latipinna
ENSCING00000009858	-	99	53.171	ENSPMEG00000017343	smfn	72	53.171	Poecilia_mexicana
ENSCING00000009858	-	99	53.171	ENSPREG00000016438	smfn	72	53.171	Poecilia_reticulata
ENSCING00000009858	-	87	58.564	ENSPPYG00000003895	REXO2	76	58.564	Pongo_abelii
ENSCING00000009858	-	84	58.857	ENSPCAG00000005237	REXO2	80	56.316	Procavia_capensis
ENSCING00000009858	-	78	58.385	ENSPCOG00000027639	REXO2	83	58.385	Propithecus_coquereli
ENSCING00000009858	-	87	49.727	ENSPVAG00000005295	REXO2	77	49.727	Pteropus_vampyrus
ENSCING00000009858	-	88	60.656	ENSPNYG00000018401	smfn	71	60.656	Pundamilia_nyererei
ENSCING00000009858	-	84	59.429	ENSPNAG00000005290	smfn	65	59.429	Pygocentrus_nattereri
ENSCING00000009858	-	87	58.011	ENSRNOG00000018939	Rexo2	76	58.011	Rattus_norvegicus
ENSCING00000009858	-	87	58.564	ENSRBIG00000037809	REXO2	76	58.564	Rhinopithecus_bieti
ENSCING00000009858	-	87	58.564	ENSRROG00000038928	REXO2	76	58.564	Rhinopithecus_roxellana
ENSCING00000009858	-	81	47.727	YLR059C	REX2	65	47.727	Saccharomyces_cerevisiae
ENSCING00000009858	-	87	59.116	ENSSBOG00000028651	REXO2	80	57.368	Saimiri_boliviensis_boliviensis
ENSCING00000009858	-	87	59.669	ENSSHAG00000008008	REXO2	77	59.669	Sarcophilus_harrisii
ENSCING00000009858	-	80	57.229	ENSSFOG00015022414	smfn	88	57.229	Scleropages_formosus
ENSCING00000009858	-	92	56.316	ENSSMAG00000003168	smfn	69	56.316	Scophthalmus_maximus
ENSCING00000009858	-	92	56.316	ENSSDUG00000015624	smfn	67	56.316	Seriola_dumerili
ENSCING00000009858	-	88	57.692	ENSSLDG00000014005	smfn	64	57.692	Seriola_lalandi_dorsalis
ENSCING00000009858	-	61	58.730	ENSSARG00000014530	REXO2	99	58.730	Sorex_araneus
ENSCING00000009858	-	65	53.676	ENSSPUG00000006005	REXO2	73	53.676	Sphenodon_punctatus
ENSCING00000009858	-	80	60.843	ENSSPAG00000001530	smfn	89	60.843	Stegastes_partitus
ENSCING00000009858	-	87	58.564	ENSSSCG00000015056	REXO2	82	55.747	Sus_scrofa
ENSCING00000009858	-	86	61.236	ENSTGUG00000000121	REXO2	78	61.749	Taeniopygia_guttata
ENSCING00000009858	-	84	61.143	ENSTRUG00000021529	smfn	73	57.143	Takifugu_rubripes
ENSCING00000009858	-	84	61.143	ENSTNIG00000008588	smfn	77	61.143	Tetraodon_nigroviridis
ENSCING00000009858	-	87	59.116	ENSTBEG00000017040	REXO2	76	59.116	Tupaia_belangeri
ENSCING00000009858	-	88	58.696	ENSTTRG00000014928	REXO2	78	58.696	Tursiops_truncatus
ENSCING00000009858	-	87	54.190	ENSUAMG00000019096	REXO2	89	55.172	Ursus_americanus
ENSCING00000009858	-	94	56.186	ENSUMAG00000003770	REXO2	82	56.186	Ursus_maritimus
ENSCING00000009858	-	80	42.169	ENSVPAG00000006301	REXO2	89	42.169	Vicugna_pacos
ENSCING00000009858	-	91	56.771	ENSVVUG00000025223	REXO2	81	56.771	Vulpes_vulpes
ENSCING00000009858	-	91	60.526	ENSXETG00000012648	rexo2	76	60.526	Xenopus_tropicalis
ENSCING00000009858	-	83	55.491	ENSXCOG00000018838	smfn	85	57.229	Xiphophorus_couchianus
ENSCING00000009858	-	97	54.500	ENSXMAG00000021125	smfn	64	54.500	Xiphophorus_maculatus