EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000010142 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3633 bases
Position: chrHT000041.1:29565-33197
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000020262	RNA_bind	PF08675.11	9.1e-23	1	1
ENSCINP00000020262	CAF1	PF04857.20	1.4e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000020262	-	1618	-	ENSCINP00000020262	527 (aa)	-	F6PI67

Gene Model

Click here to download ENSCING00000010142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000010142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000010142	-	99	44.465	ENSG00000140694	PARN	99	43.003	Homo_sapiens
ENSCING00000010142	-	99	43.633	ENSAMEG00000011208	PARN	80	43.633	Ailuropoda_melanoleuca
ENSCING00000010142	-	99	40.713	ENSACIG00000000619	parn	79	40.713	Amphilophus_citrinellus
ENSCING00000010142	-	99	42.214	ENSAOCG00000003465	parn	75	42.214	Amphiprion_ocellaris
ENSCING00000010142	-	89	42.675	ENSAPEG00000010661	parn	86	42.675	Amphiprion_percula
ENSCING00000010142	-	99	43.446	ENSATEG00000004661	parn	75	43.446	Anabas_testudineus
ENSCING00000010142	-	99	43.421	ENSAPLG00000013914	PARN	80	43.503	Anas_platyrhynchos
ENSCING00000010142	-	99	44.465	ENSACAG00000004973	PARN	79	44.465	Anolis_carolinensis
ENSCING00000010142	-	99	43.797	ENSANAG00000031516	PARN	88	47.368	Aotus_nancymaae
ENSCING00000010142	-	99	42.322	ENSACLG00000004742	parn	76	42.322	Astatotilapia_calliptera
ENSCING00000010142	-	99	42.589	ENSAMXG00000012390	parn	84	41.088	Astyanax_mexicanus
ENSCING00000010142	-	99	42.589	ENSBTAG00000018097	PARN	81	42.011	Bos_taurus
ENSCING00000010142	-	99	44.090	ENSCJAG00000015866	PARN	88	47.368	Callithrix_jacchus
ENSCING00000010142	-	99	44.278	ENSCAFG00000018795	PARN	80	44.278	Canis_familiaris
ENSCING00000010142	-	99	44.278	ENSCAFG00020024126	PARN	80	44.278	Canis_lupus_dingo
ENSCING00000010142	-	99	43.902	ENSCHIG00000018143	PARN	80	43.902	Capra_hircus
ENSCING00000010142	-	91	30.185	ENSCAPG00000007984	PARN	78	30.185	Cavia_aperea
ENSCING00000010142	-	99	44.278	ENSCPOG00000002263	PARN	80	44.278	Cavia_porcellus
ENSCING00000010142	-	99	44.465	ENSCCAG00000030367	PARN	88	47.368	Cebus_capucinus
ENSCING00000010142	-	59	37.748	ENSCATG00000033196	PNLDC1	65	37.748	Cercocebus_atys
ENSCING00000010142	-	99	43.797	ENSCATG00000041368	PARN	92	43.797	Cercocebus_atys
ENSCING00000010142	-	99	44.173	ENSCLAG00000015406	PARN	80	44.465	Chinchilla_lanigera
ENSCING00000010142	-	99	44.465	ENSCSAG00000008142	PARN	80	44.465	Chlorocebus_sabaeus
ENSCING00000010142	-	84	38.222	ENSCHOG00000007014	PARN	71	38.222	Choloepus_hoffmanni
ENSCING00000010142	-	89	43.949	ENSCPBG00000006609	PARN	78	43.949	Chrysemys_picta_bellii
ENSCING00000010142	-	99	37.848	ENSCANG00000028849	-	72	47.368	Colobus_angolensis_palliatus
ENSCING00000010142	-	66	34.459	ENSCGRG00001011981	-	68	34.459	Cricetulus_griseus_chok1gshd
ENSCING00000010142	-	99	44.361	ENSCGRG00001012096	Parn	81	44.653	Cricetulus_griseus_chok1gshd
ENSCING00000010142	-	99	44.361	ENSCGRG00000004939	Parn	81	44.653	Cricetulus_griseus_crigri
ENSCING00000010142	-	99	42.322	ENSCSEG00000002064	parn	98	33.628	Cynoglossus_semilaevis
ENSCING00000010142	-	99	41.651	ENSCVAG00000014848	parn	75	41.651	Cyprinodon_variegatus
ENSCING00000010142	-	99	42.026	ENSDARG00000102634	parn	80	52.273	Danio_rerio
ENSCING00000010142	-	63	37.086	ENSDNOG00000013709	PNLDC1	63	37.086	Dasypus_novemcinctus
ENSCING00000010142	-	99	44.090	ENSDNOG00000000833	PARN	90	44.090	Dasypus_novemcinctus
ENSCING00000010142	-	78	38.824	ENSETEG00000014828	-	69	37.591	Echinops_telfairi
ENSCING00000010142	-	69	35.897	ENSETEG00000007587	PNLDC1	68	35.897	Echinops_telfairi
ENSCING00000010142	-	99	43.902	ENSEASG00005011400	PARN	80	43.902	Equus_asinus_asinus
ENSCING00000010142	-	61	36.424	ENSECAG00000012898	PNLDC1	66	36.424	Equus_caballus
ENSCING00000010142	-	99	43.715	ENSECAG00000017792	PARN	80	43.715	Equus_caballus
ENSCING00000010142	-	70	54.717	ENSEEUG00000010370	PARN	57	54.717	Erinaceus_europaeus
ENSCING00000010142	-	99	40.824	ENSELUG00000013139	parn	68	40.824	Esox_lucius
ENSCING00000010142	-	99	44.090	ENSFCAG00000044961	PARN	80	44.090	Felis_catus
ENSCING00000010142	-	98	43.678	ENSFALG00000003911	PARN	78	43.977	Ficedula_albicollis
ENSCING00000010142	-	99	44.361	ENSFDAG00000009234	PARN	82	44.465	Fukomys_damarensis
ENSCING00000010142	-	99	38.910	ENSFHEG00000013738	parn	89	47.368	Fundulus_heteroclitus
ENSCING00000010142	-	99	42.453	ENSGMOG00000003231	parn	93	42.453	Gadus_morhua
ENSCING00000010142	-	99	43.233	ENSGALG00000003091	PARN	81	43.233	Gallus_gallus
ENSCING00000010142	-	99	41.386	ENSGAFG00000011061	parn	75	41.386	Gambusia_affinis
ENSCING00000010142	-	99	41.948	ENSGACG00000019501	parn	82	41.948	Gasterosteus_aculeatus
ENSCING00000010142	-	99	44.653	ENSGGOG00000025224	PARN	88	47.368	Gorilla_gorilla
ENSCING00000010142	-	99	42.322	ENSHBUG00000017906	parn	86	42.056	Haplochromis_burtoni
ENSCING00000010142	-	99	44.090	ENSHGLG00000010886	PARN	80	44.090	Heterocephalus_glaber_female
ENSCING00000010142	-	99	44.090	ENSHGLG00100014659	PARN	80	44.090	Heterocephalus_glaber_male
ENSCING00000010142	-	98	41.825	ENSHCOG00000008683	parn	87	41.825	Hippocampus_comes
ENSCING00000010142	-	99	35.660	ENSIPUG00000012401	parn	76	36.210	Ictalurus_punctatus
ENSCING00000010142	-	99	44.090	ENSSTOG00000007519	PARN	81	44.090	Ictidomys_tridecemlineatus
ENSCING00000010142	-	99	43.152	ENSJJAG00000023049	Parn	82	43.152	Jaculus_jaculus
ENSCING00000010142	-	99	42.697	ENSKMAG00000009462	parn	75	42.697	Kryptolebias_marmoratus
ENSCING00000010142	-	99	42.402	ENSLBEG00000009167	parn	80	42.402	Labrus_bergylta
ENSCING00000010142	-	96	41.373	ENSLACG00000004207	PARN	100	39.140	Latimeria_chalumnae
ENSCING00000010142	-	99	43.315	ENSLOCG00000000715	parn	75	43.315	Lepisosteus_oculatus
ENSCING00000010142	-	99	43.421	ENSLAFG00000015036	PARN	81	43.421	Loxodonta_africana
ENSCING00000010142	-	99	43.340	ENSMFAG00000044852	PARN	78	44.586	Macaca_fascicularis
ENSCING00000010142	-	99	44.465	ENSMMUG00000018849	PARN	80	44.465	Macaca_mulatta
ENSCING00000010142	-	99	44.465	ENSMNEG00000045108	PARN	80	44.465	Macaca_nemestrina
ENSCING00000010142	-	99	43.985	ENSMLEG00000031743	PARN	80	44.278	Mandrillus_leucophaeus
ENSCING00000010142	-	99	42.322	ENSMAMG00000006939	parn	75	42.322	Mastacembelus_armatus
ENSCING00000010142	-	99	42.322	ENSMZEG00005013590	parn	87	41.308	Maylandia_zebra
ENSCING00000010142	-	98	42.286	ENSMGAG00000001004	PARN	79	42.286	Meleagris_gallopavo
ENSCING00000010142	-	99	40.892	ENSMAUG00000008025	Parn	81	40.892	Mesocricetus_auratus
ENSCING00000010142	-	99	43.985	ENSMICG00000016053	PARN	88	47.368	Microcebus_murinus
ENSCING00000010142	-	96	44.314	ENSMOCG00000022211	Parn	99	44.314	Microtus_ochrogaster
ENSCING00000010142	-	99	41.088	ENSMMOG00000011333	parn	83	41.088	Mola_mola
ENSCING00000010142	-	97	44.101	ENSMODG00000004915	PARN	100	44.101	Monodelphis_domestica
ENSCING00000010142	-	99	41.243	ENSMALG00000019426	parn	86	41.243	Monopterus_albus
ENSCING00000010142	-	99	43.715	MGP_CAROLIEiJ_G0020466	Parn	81	44.007	Mus_caroli
ENSCING00000010142	-	99	43.902	ENSMUSG00000022685	Parn	100	45.122	Mus_musculus
ENSCING00000010142	-	99	43.633	MGP_PahariEiJ_G0016172	Parn	81	43.633	Mus_pahari
ENSCING00000010142	-	99	43.715	MGP_SPRETEiJ_G0021361	Parn	81	44.007	Mus_spretus
ENSCING00000010142	-	99	44.090	ENSMPUG00000014464	PARN	80	44.090	Mustela_putorius_furo
ENSCING00000010142	-	96	44.031	ENSMLUG00000005414	PARN	99	44.031	Myotis_lucifugus
ENSCING00000010142	-	99	41.839	ENSNBRG00000006805	parn	87	41.839	Neolamprologus_brichardi
ENSCING00000010142	-	99	44.278	ENSNLEG00000010241	PARN	88	47.368	Nomascus_leucogenys
ENSCING00000010142	-	77	42.657	ENSMEUG00000008178	-	64	42.657	Notamacropus_eugenii
ENSCING00000010142	-	98	41.445	ENSOPRG00000012187	PARN	80	41.445	Ochotona_princeps
ENSCING00000010142	-	99	40.374	ENSODEG00000001617	PARN	82	40.672	Octodon_degus
ENSCING00000010142	-	99	42.509	ENSONIG00000000151	parn	80	42.322	Oreochromis_niloticus
ENSCING00000010142	-	99	44.129	ENSOCUG00000000322	PARN	80	44.129	Oryctolagus_cuniculus
ENSCING00000010142	-	99	41.760	ENSORLG00020010313	parn	76	42.135	Oryzias_latipes_hni
ENSCING00000010142	-	99	41.948	ENSORLG00015000300	parn	76	41.948	Oryzias_latipes_hsok
ENSCING00000010142	-	99	42.135	ENSOMEG00000019555	parn	96	36.283	Oryzias_melastigma
ENSCING00000010142	-	96	42.240	ENSOGAG00000014626	PARN	99	42.240	Otolemur_garnettii
ENSCING00000010142	-	95	44.510	ENSOARG00000007574	PARN	99	44.510	Ovis_aries
ENSCING00000010142	-	99	44.465	ENSPPAG00000031438	PARN	88	47.368	Pan_paniscus
ENSCING00000010142	-	99	43.902	ENSPPRG00000018583	PARN	80	43.902	Panthera_pardus
ENSCING00000010142	-	99	44.090	ENSPTIG00000012135	PARN	80	44.090	Panthera_tigris_altaica
ENSCING00000010142	-	99	44.465	ENSPTRG00000007792	PARN	88	47.368	Pan_troglodytes
ENSCING00000010142	-	99	42.669	ENSPANG00000020099	PARN	80	42.964	Papio_anubis
ENSCING00000010142	-	99	41.996	ENSPKIG00000022807	parn	81	40.299	Paramormyrops_kingsleyae
ENSCING00000010142	-	99	43.045	ENSPSIG00000014804	PARN	80	43.045	Pelodiscus_sinensis
ENSCING00000010142	-	99	39.962	ENSPMGG00000014431	parn	71	40.901	Periophthalmus_magnuspinnatus
ENSCING00000010142	-	99	43.421	ENSPEMG00000018439	Parn	81	43.715	Peromyscus_maniculatus_bairdii
ENSCING00000010142	-	99	43.346	ENSPMAG00000003956	parn	98	43.833	Petromyzon_marinus
ENSCING00000010142	-	84	39.690	ENSPCIG00000001259	PARN	88	45.614	Phascolarctos_cinereus
ENSCING00000010142	-	99	40.525	ENSPFOG00000012823	parn	75	40.824	Poecilia_formosa
ENSCING00000010142	-	99	40.824	ENSPLAG00000006395	parn	75	40.824	Poecilia_latipinna
ENSCING00000010142	-	99	41.199	ENSPMEG00000007711	parn	75	41.199	Poecilia_mexicana
ENSCING00000010142	-	99	40.824	ENSPREG00000000147	parn	75	40.824	Poecilia_reticulata
ENSCING00000010142	-	99	43.820	ENSPPYG00000007123	PARN	80	44.112	Pongo_abelii
ENSCING00000010142	-	85	41.778	ENSPCAG00000001741	PARN	70	41.778	Procavia_capensis
ENSCING00000010142	-	99	42.105	ENSPCOG00000019292	PARN	88	47.368	Propithecus_coquereli
ENSCING00000010142	-	98	40.571	ENSPVAG00000002547	PARN	80	40.571	Pteropus_vampyrus
ENSCING00000010142	-	99	42.322	ENSPNYG00000006835	parn	87	41.308	Pundamilia_nyererei
ENSCING00000010142	-	91	42.387	ENSPNAG00000018905	parn	77	42.387	Pygocentrus_nattereri
ENSCING00000010142	-	99	43.715	ENSRNOG00000002912	Parn	88	45.161	Rattus_norvegicus
ENSCING00000010142	-	99	43.715	ENSSBOG00000034726	PARN	80	43.715	Saimiri_boliviensis_boliviensis
ENSCING00000010142	-	83	41.950	ENSSHAG00000008493	PARN	95	41.950	Sarcophilus_harrisii
ENSCING00000010142	-	99	42.884	ENSSFOG00015014165	parn	85	42.697	Scleropages_formosus
ENSCING00000010142	-	99	43.258	ENSSMAG00000000685	parn	83	40.445	Scophthalmus_maximus
ENSCING00000010142	-	99	42.214	ENSSDUG00000014555	parn	74	42.214	Seriola_dumerili
ENSCING00000010142	-	84	45.312	ENSSARG00000014339	PARN	74	45.312	Sorex_araneus
ENSCING00000010142	-	99	43.233	ENSSPUG00000007719	PARN	80	43.233	Sphenodon_punctatus
ENSCING00000010142	-	99	42.697	ENSSPAG00000007095	parn	83	40.150	Stegastes_partitus
ENSCING00000010142	-	99	44.278	ENSSSCG00000007878	PARN	72	44.278	Sus_scrofa
ENSCING00000010142	-	99	43.893	ENSTGUG00000004971	PARN	79	43.893	Taeniopygia_guttata
ENSCING00000010142	-	99	44.007	ENSTNIG00000008252	parn	82	44.007	Tetraodon_nigroviridis
ENSCING00000010142	-	89	36.076	ENSTBEG00000010407	PARN	78	36.287	Tupaia_belangeri
ENSCING00000010142	-	94	44.930	ENSTTRG00000002843	PARN	76	44.930	Tursiops_truncatus
ENSCING00000010142	-	88	39.355	ENSUAMG00000008283	PARN	94	38.987	Ursus_americanus
ENSCING00000010142	-	99	43.715	ENSUMAG00000004527	PARN	80	43.715	Ursus_maritimus
ENSCING00000010142	-	98	42.476	ENSVPAG00000008968	PARN	82	42.476	Vicugna_pacos
ENSCING00000010142	-	99	43.902	ENSVVUG00000019509	PARN	80	43.902	Vulpes_vulpes
ENSCING00000010142	-	99	43.667	ENSXETG00000010994	parn	97	43.667	Xenopus_tropicalis
ENSCING00000010142	-	99	39.513	ENSXCOG00000015990	parn	86	39.212	Xiphophorus_couchianus
ENSCING00000010142	-	99	40.824	ENSXMAG00000014783	parn	75	40.824	Xiphophorus_maculatus