EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000010157 (Gene tree)
Gene ID: 100175001
Gene Symbol: -
Alias: -
Full Name: probable RNA-binding protein 18
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2243 bases
Position: chr12:4913655-4915897
Accession: 100175001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000020277	RRM_1	PF00076.22	3.9e-12	1	1
ENSCINP00000033184	RRM_1	PF00076.22	4.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000020277	-	670	-	ENSCINP00000020277	194 (aa)	-	F6PI06
ENSCINT00000032833	-	817	-	ENSCINP00000033184	204 (aa)	XP_002127424	H2XU50

Gene Model

Click here to download ENSCING00000010157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000010157's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000010157	-	95	33.649	ENSG00000119446	RBM18	99	33.649	Homo_sapiens
ENSCING00000010157	-	87	40.341	ENSAPOG00000001987	rbm18	65	44.361	Acanthochromis_polyacanthus
ENSCING00000010157	-	95	33.175	ENSAMEG00000000772	RBM18	99	33.175	Ailuropoda_melanoleuca
ENSCING00000010157	-	87	37.234	ENSAOCG00000006762	rbm18	68	40.972	Amphiprion_ocellaris
ENSCING00000010157	-	87	37.234	ENSAPEG00000007972	rbm18	68	40.972	Amphiprion_percula
ENSCING00000010157	-	94	37.949	ENSATEG00000019164	rbm18	83	38.122	Anabas_testudineus
ENSCING00000010157	-	95	33.649	ENSANAG00000035441	RBM18	99	33.649	Aotus_nancymaae
ENSCING00000010157	-	90	41.209	ENSACLG00000019848	rbm18	91	38.547	Astatotilapia_calliptera
ENSCING00000010157	-	91	38.298	ENSAMXG00000035574	rbm18	93	38.298	Astyanax_mexicanus
ENSCING00000010157	-	95	32.701	ENSBTAG00000016367	RBM18	99	32.701	Bos_taurus
ENSCING00000010157	-	95	33.649	ENSCJAG00000046355	RBM18	99	33.649	Callithrix_jacchus
ENSCING00000010157	-	95	33.175	ENSCAFG00000030041	RBM18	99	33.175	Canis_familiaris
ENSCING00000010157	-	95	33.175	ENSCAFG00020015174	RBM18	99	33.175	Canis_lupus_dingo
ENSCING00000010157	-	95	32.701	ENSCHIG00000026444	RBM18	99	32.701	Capra_hircus
ENSCING00000010157	-	95	33.649	ENSTSYG00000030353	RBM18	99	33.649	Carlito_syrichta
ENSCING00000010157	-	95	33.649	ENSCPOG00000038004	RBM18	99	33.649	Cavia_porcellus
ENSCING00000010157	-	95	33.649	ENSCCAG00000035467	RBM18	99	33.649	Cebus_capucinus
ENSCING00000010157	-	95	33.649	ENSCATG00000035634	RBM18	99	33.649	Cercocebus_atys
ENSCING00000010157	-	95	35.149	ENSCLAG00000010773	RBM18	99	35.149	Chinchilla_lanigera
ENSCING00000010157	-	68	40.136	ENSCSAG00000013373	RBM18	99	40.000	Chlorocebus_sabaeus
ENSCING00000010157	-	79	37.423	ENSCHOG00000001341	RBM18	100	33.908	Choloepus_hoffmanni
ENSCING00000010157	-	92	36.082	ENSCPBG00000009885	RBM18	81	38.323	Chrysemys_picta_bellii
ENSCING00000010157	-	60	57.265	ENSCSAVG00000000409	-	94	57.851	Ciona_savignyi
ENSCING00000010157	-	86	38.418	ENSCANG00000029590	RBM18	87	35.106	Colobus_angolensis_palliatus
ENSCING00000010157	-	95	33.649	ENSCGRG00001014593	Rbm18	99	33.649	Cricetulus_griseus_chok1gshd
ENSCING00000010157	-	87	38.764	ENSCGRG00000012247	Rbm18	94	35.450	Cricetulus_griseus_crigri
ENSCING00000010157	-	94	37.629	ENSCSEG00000017587	rbm18	83	36.410	Cynoglossus_semilaevis
ENSCING00000010157	-	87	40.223	ENSCVAG00000012436	rbm18	69	38.650	Cyprinodon_variegatus
ENSCING00000010157	-	95	37.838	ENSDARG00000044255	rbm18	97	37.500	Danio_rerio
ENSCING00000010157	-	95	33.175	ENSDNOG00000031658	RBM18	99	33.175	Dasypus_novemcinctus
ENSCING00000010157	-	95	33.649	ENSDORG00000028540	Rbm18	99	33.649	Dipodomys_ordii
ENSCING00000010157	-	67	34.091	FBgn0030571	CG14414	64	33.663	Drosophila_melanogaster
ENSCING00000010157	-	95	33.158	ENSETEG00000009832	RBM18	56	49.057	Echinops_telfairi
ENSCING00000010157	-	73	40.278	ENSEBUG00000009127	rbm18	74	40.972	Eptatretus_burgeri
ENSCING00000010157	-	95	33.175	ENSEASG00005021084	RBM18	99	33.175	Equus_asinus_asinus
ENSCING00000010157	-	95	33.175	ENSECAG00000024639	RBM18	99	33.175	Equus_caballus
ENSCING00000010157	-	86	38.764	ENSELUG00000005876	rbm18	74	43.151	Esox_lucius
ENSCING00000010157	-	95	33.175	ENSFCAG00000037774	RBM18	99	33.175	Felis_catus
ENSCING00000010157	-	79	37.423	ENSFALG00000001940	RBM18	96	34.483	Ficedula_albicollis
ENSCING00000010157	-	95	33.649	ENSFDAG00000012679	RBM18	99	33.649	Fukomys_damarensis
ENSCING00000010157	-	87	40.659	ENSFHEG00000012457	rbm18	80	38.788	Fundulus_heteroclitus
ENSCING00000010157	-	94	33.824	ENSGMOG00000019735	rbm18	91	33.824	Gadus_morhua
ENSCING00000010157	-	87	38.547	ENSGALG00000028167	RBM18	88	35.789	Gallus_gallus
ENSCING00000010157	-	88	39.779	ENSGAFG00000007767	rbm18	80	38.182	Gambusia_affinis
ENSCING00000010157	-	87	37.433	ENSGACG00000017348	rbm18	70	40.559	Gasterosteus_aculeatus
ENSCING00000010157	-	92	36.598	ENSGAGG00000018318	RBM18	95	34.634	Gopherus_agassizii
ENSCING00000010157	-	95	33.649	ENSGGOG00000011052	RBM18	99	33.649	Gorilla_gorilla
ENSCING00000010157	-	90	41.209	ENSHBUG00000015237	rbm18	92	38.547	Haplochromis_burtoni
ENSCING00000010157	-	95	33.649	ENSHGLG00000011073	RBM18	99	33.649	Heterocephalus_glaber_female
ENSCING00000010157	-	79	32.927	ENSHGLG00100006247	-	80	32.886	Heterocephalus_glaber_male
ENSCING00000010157	-	95	33.649	ENSHGLG00100005536	RBM18	99	33.649	Heterocephalus_glaber_male
ENSCING00000010157	-	87	36.872	ENSHCOG00000003148	rbm18	85	35.938	Hippocampus_comes
ENSCING00000010157	-	95	37.186	ENSIPUG00000021512	rbm18	80	37.186	Ictalurus_punctatus
ENSCING00000010157	-	91	36.702	ENSSTOG00000032266	-	99	35.263	Ictidomys_tridecemlineatus
ENSCING00000010157	-	95	33.649	ENSSTOG00000022388	-	99	33.649	Ictidomys_tridecemlineatus
ENSCING00000010157	-	95	34.500	ENSJJAG00000010974	-	99	31.754	Jaculus_jaculus
ENSCING00000010157	-	68	40.136	ENSJJAG00000009581	-	85	41.216	Jaculus_jaculus
ENSCING00000010157	-	88	38.095	ENSKMAG00000010679	rbm18	70	37.725	Kryptolebias_marmoratus
ENSCING00000010157	-	87	37.234	ENSLBEG00000023896	rbm18	80	38.323	Labrus_bergylta
ENSCING00000010157	-	50	48.544	ENSLACG00000009920	RBM18	75	48.544	Latimeria_chalumnae
ENSCING00000010157	-	95	36.500	ENSLAFG00000012134	RBM18	99	33.649	Loxodonta_africana
ENSCING00000010157	-	95	33.649	ENSMFAG00000000443	RBM18	99	33.649	Macaca_fascicularis
ENSCING00000010157	-	95	33.649	ENSMMUG00000011455	RBM18	99	33.649	Macaca_mulatta
ENSCING00000010157	-	95	33.649	ENSMNEG00000035374	RBM18	99	33.649	Macaca_nemestrina
ENSCING00000010157	-	95	33.649	ENSMLEG00000043105	RBM18	99	33.649	Mandrillus_leucophaeus
ENSCING00000010157	-	94	36.453	ENSMAMG00000009239	rbm18	72	39.623	Mastacembelus_armatus
ENSCING00000010157	-	90	38.860	ENSMZEG00005017921	rbm18	92	37.297	Maylandia_zebra
ENSCING00000010157	-	80	37.349	ENSMGAG00000016888	RBM18	87	34.463	Meleagris_gallopavo
ENSCING00000010157	-	95	33.175	ENSMAUG00000021365	Rbm18	99	33.175	Mesocricetus_auratus
ENSCING00000010157	-	86	38.418	ENSMICG00000046793	RBM18	87	35.106	Microcebus_murinus
ENSCING00000010157	-	95	33.649	ENSMOCG00000000613	Rbm18	99	33.649	Microtus_ochrogaster
ENSCING00000010157	-	94	39.378	ENSMMOG00000021319	rbm18	83	38.824	Mola_mola
ENSCING00000010157	-	79	36.810	ENSMODG00000019688	RBM18	100	33.333	Monodelphis_domestica
ENSCING00000010157	-	94	36.318	ENSMALG00000017766	rbm18	72	39.744	Monopterus_albus
ENSCING00000010157	-	95	33.175	MGP_CAROLIEiJ_G0023488	Rbm18	99	33.175	Mus_caroli
ENSCING00000010157	-	95	33.175	ENSMUSG00000026889	Rbm18	99	33.175	Mus_musculus
ENSCING00000010157	-	95	36.000	MGP_PahariEiJ_G0024945	Rbm18	99	33.175	Mus_pahari
ENSCING00000010157	-	95	33.175	MGP_SPRETEiJ_G0024405	Rbm18	99	33.175	Mus_spretus
ENSCING00000010157	-	95	33.175	ENSMPUG00000007246	RBM18	99	33.175	Mustela_putorius_furo
ENSCING00000010157	-	95	33.175	ENSMLUG00000013224	-	99	33.175	Myotis_lucifugus
ENSCING00000010157	-	95	33.175	ENSMLUG00000004794	-	99	33.175	Myotis_lucifugus
ENSCING00000010157	-	95	33.649	ENSNGAG00000000041	Rbm18	99	33.649	Nannospalax_galili
ENSCING00000010157	-	90	39.062	ENSNBRG00000021128	rbm18	92	37.037	Neolamprologus_brichardi
ENSCING00000010157	-	95	33.649	ENSNLEG00000017174	RBM18	99	33.649	Nomascus_leucogenys
ENSCING00000010157	-	95	36.000	ENSOPRG00000010381	RBM18	99	33.175	Ochotona_princeps
ENSCING00000010157	-	95	33.649	ENSODEG00000002055	RBM18	99	33.649	Octodon_degus
ENSCING00000010157	-	90	38.860	ENSONIG00000003723	rbm18	92	37.297	Oreochromis_niloticus
ENSCING00000010157	-	95	36.500	ENSOANG00000008200	RBM18	99	34.123	Ornithorhynchus_anatinus
ENSCING00000010157	-	95	33.649	ENSOCUG00000008527	RBM18	99	33.649	Oryctolagus_cuniculus
ENSCING00000010157	-	74	42.466	ENSORLG00020013452	rbm18	72	43.537	Oryzias_latipes_hni
ENSCING00000010157	-	95	33.649	ENSOGAG00000015104	RBM18	99	33.649	Otolemur_garnettii
ENSCING00000010157	-	95	32.701	ENSOARG00000014228	RBM18	99	32.701	Ovis_aries
ENSCING00000010157	-	95	33.649	ENSPPAG00000023355	RBM18	99	33.649	Pan_paniscus
ENSCING00000010157	-	95	33.175	ENSPPRG00000011360	RBM18	99	33.175	Panthera_pardus
ENSCING00000010157	-	95	33.175	ENSPTIG00000007126	RBM18	99	33.175	Panthera_tigris_altaica
ENSCING00000010157	-	95	33.649	ENSPTRG00000021323	RBM18	99	33.649	Pan_troglodytes
ENSCING00000010157	-	95	33.649	ENSPANG00000025845	RBM18	99	33.649	Papio_anubis
ENSCING00000010157	-	92	37.436	ENSPSIG00000013631	RBM18	83	40.476	Pelodiscus_sinensis
ENSCING00000010157	-	68	39.189	ENSPMGG00000023951	rbm18	71	39.189	Periophthalmus_magnuspinnatus
ENSCING00000010157	-	68	38.060	ENSPMAG00000000630	rbm18	82	37.589	Petromyzon_marinus
ENSCING00000010157	-	95	33.649	ENSPCIG00000025526	RBM18	99	33.649	Phascolarctos_cinereus
ENSCING00000010157	-	88	39.779	ENSPFOG00000019706	rbm18	80	38.182	Poecilia_formosa
ENSCING00000010157	-	88	39.779	ENSPLAG00000005571	rbm18	80	38.182	Poecilia_latipinna
ENSCING00000010157	-	88	39.779	ENSPMEG00000013977	rbm18	80	38.182	Poecilia_mexicana
ENSCING00000010157	-	88	39.779	ENSPREG00000009157	rbm18	80	38.182	Poecilia_reticulata
ENSCING00000010157	-	95	33.649	ENSPPYG00000019569	RBM18	99	33.649	Pongo_abelii
ENSCING00000010157	-	68	40.136	ENSPCAG00000011245	RBM18	99	41.096	Procavia_capensis
ENSCING00000010157	-	95	33.649	ENSPCOG00000024474	RBM18	99	33.649	Propithecus_coquereli
ENSCING00000010157	-	95	33.175	ENSPVAG00000000863	RBM18	99	33.175	Pteropus_vampyrus
ENSCING00000010157	-	90	39.062	ENSPNYG00000012421	rbm18	93	36.667	Pundamilia_nyererei
ENSCING00000010157	-	95	37.634	ENSPNAG00000017660	rbm18	97	37.561	Pygocentrus_nattereri
ENSCING00000010157	-	95	36.000	ENSRNOG00000006763	Rbm18	99	33.175	Rattus_norvegicus
ENSCING00000010157	-	86	38.418	ENSRBIG00000040177	RBM18	87	35.106	Rhinopithecus_bieti
ENSCING00000010157	-	86	38.418	ENSRROG00000031364	RBM18	87	35.106	Rhinopithecus_roxellana
ENSCING00000010157	-	95	33.649	ENSSBOG00000024806	RBM18	99	33.649	Saimiri_boliviensis_boliviensis
ENSCING00000010157	-	95	33.649	ENSSHAG00000012257	RBM18	99	33.649	Sarcophilus_harrisii
ENSCING00000010157	-	90	39.037	ENSSFOG00015001100	rbm18	80	40.127	Scleropages_formosus
ENSCING00000010157	-	87	38.298	ENSSMAG00000020138	rbm18	80	39.521	Scophthalmus_maximus
ENSCING00000010157	-	94	36.634	ENSSDUG00000016203	rbm18	70	39.873	Seriola_dumerili
ENSCING00000010157	-	94	36.634	ENSSLDG00000016329	rbm18	72	39.873	Seriola_lalandi_dorsalis
ENSCING00000010157	-	79	36.810	ENSSPUG00000001601	RBM18	87	33.908	Sphenodon_punctatus
ENSCING00000010157	-	87	37.234	ENSSPAG00000005394	rbm18	68	40.972	Stegastes_partitus
ENSCING00000010157	-	95	32.701	ENSSSCG00000030089	RBM18	99	32.701	Sus_scrofa
ENSCING00000010157	-	79	37.423	ENSTGUG00000006802	RBM18	99	35.057	Taeniopygia_guttata
ENSCING00000010157	-	94	35.938	ENSTRUG00000005812	rbm18	83	35.795	Takifugu_rubripes
ENSCING00000010157	-	80	39.306	ENSTNIG00000009141	rbm18	81	37.654	Tetraodon_nigroviridis
ENSCING00000010157	-	79	37.423	ENSTBEG00000016520	RBM18	100	33.908	Tupaia_belangeri
ENSCING00000010157	-	95	33.175	ENSUAMG00000014431	RBM18	99	33.175	Ursus_americanus
ENSCING00000010157	-	95	33.175	ENSUMAG00000003445	RBM18	99	33.175	Ursus_maritimus
ENSCING00000010157	-	95	33.175	ENSVPAG00000008618	RBM18	99	33.175	Vicugna_pacos
ENSCING00000010157	-	95	33.175	ENSVVUG00000009442	RBM18	99	33.175	Vulpes_vulpes
ENSCING00000010157	-	88	37.989	ENSXETG00000016328	rbm18	88	37.989	Xenopus_tropicalis
ENSCING00000010157	-	88	39.779	ENSXMAG00000003538	rbm18	81	37.725	Xiphophorus_maculatus