EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000011342 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Minus strand
Length
2646 bases
Position
chr2:7219982-7222627
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000021713zf-C2H2PF00096.266.9e-3015
ENSCINP00000021713zf-C2H2PF00096.266.9e-3025
ENSCINP00000021713zf-C2H2PF00096.266.9e-3035
ENSCINP00000021713zf-C2H2PF00096.266.9e-3045
ENSCINP00000021713zf-C2H2PF00096.266.9e-3055
ENSCINP00000021713zf-metPF12874.77.8e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000021959-567-ENSCINP00000021713189 (aa)-F6UXM4
Gene Model
Click here to download ENSCING00000011342's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000011342's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000011342-8874.251ENSAMEG00000013858-8674.251Ailuropoda_melanoleuca
ENSCING00000011342-9362.759ENSACIG00000002180-9862.759Amphilophus_citrinellus
ENSCING00000011342-9074.775ENSACLG00000001258-9174.775Astatotilapia_calliptera
ENSCING00000011342-9469.613ENSAMXG00000006669GFI15869.613Astyanax_mexicanus
ENSCING00000011342-8758.788ENSAMXG00000015228-5258.788Astyanax_mexicanus
ENSCING00000011342-8881.416ENSCAPG00000016268-9881.416Cavia_aperea
ENSCING00000011342-7177.612ENSCPBG00000015742-9977.612Chrysemys_picta_bellii
ENSCING00000011342-8592.547ENSCSAVG00000005904-9992.547Ciona_savignyi
ENSCING00000011342-7178.358ENSCGRG00000013485-9978.358Cricetulus_griseus_crigri
ENSCING00000011342-7178.358ENSDORG00000023443-9978.358Dipodomys_ordii
ENSCING00000011342-8873.653ENSEBUG00000008075gfi1ab5673.653Eptatretus_burgeri
ENSCING00000011342-7178.358ENSFDAG00000019296-9978.358Fukomys_damarensis
ENSCING00000011342-7177.612ENSGAGG00000015899GFI19977.612Gopherus_agassizii
ENSCING00000011342-9572.571ENSHCOG00000019555GFI15472.571Hippocampus_comes
ENSCING00000011342-8757.576ENSIPUG00000021407-5257.576Ictalurus_punctatus
ENSCING00000011342-8881.416ENSJJAG00000022622-9881.416Jaculus_jaculus
ENSCING00000011342-8770.060ENSLACG00000017590-5170.060Latimeria_chalumnae
ENSCING00000011342-7178.358ENSMMUG00000005068GFI19978.358Macaca_mulatta
ENSCING00000011342-7178.358ENSMAUG00000021273-9978.358Mesocricetus_auratus
ENSCING00000011342-7178.358ENSMOCG00000004478-9978.358Microtus_ochrogaster
ENSCING00000011342-8874.251MGP_CAROLIEiJ_G0027508Gfi19978.358Mus_caroli
ENSCING00000011342-8874.251MGP_PahariEiJ_G0017280Gfi19978.358Mus_pahari
ENSCING00000011342-7178.358ENSNGAG00000002549-9978.358Nannospalax_galili
ENSCING00000011342-8773.874ENSNBRG00000010351-8673.874Neolamprologus_brichardi
ENSCING00000011342-6074.561ENSNBRG00000001834-9474.561Neolamprologus_brichardi
ENSCING00000011342-7178.358ENSODEG00000006410-9978.358Octodon_degus
ENSCING00000011342-8576.074ENSOANG00000022289-8676.074Ornithorhynchus_anatinus
ENSCING00000011342-9573.099ENSORLG00020002817GFI15273.099Oryzias_latipes_hni
ENSCING00000011342-9280.702ENSPTIG00000002680-8580.702Panthera_tigris_altaica
ENSCING00000011342-9573.684ENSPMGG00000011041GFI15473.684Periophthalmus_magnuspinnatus
ENSCING00000011342-9075.294ENSPLAG00000010879gfi1ab5275.294Poecilia_latipinna
ENSCING00000011342-9576.582ENSPREG00000007997GFI15076.582Poecilia_reticulata
ENSCING00000011342-8774.775ENSPNYG00000001775-8674.775Pundamilia_nyererei
ENSCING00000011342-8958.857ENSPNAG00000014299-5458.857Pygocentrus_nattereri
ENSCING00000011342-8658.182ENSSFOG00015008114-5258.182Scleropages_formosus
ENSCING00000011342-8773.214ENSSLDG00000017614-8473.214Seriola_lalandi_dorsalis
ENSCING00000011342-9074.706ENSSPAG00000009140gfi1ab5474.706Stegastes_partitus
ENSCING00000011342-7178.358ENSUMAG00000011251-9978.358Ursus_maritimus
ENSCING00000011342-9082.727ENSXCOG00000009186-9582.727Xiphophorus_couchianus

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